RchiOBHm_Chr2g0087221

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
2050991 .. 2051452
462 bp
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UTR
Exon/CDS
Intron
PRQ46267

Sequence Viewer

Length: 255 bp
ATGGCTGAATCTCCCACTCCTGCCAAGGTCGAGTTAATAGCAACCAAAACTGTGCAAGAGCAACTCACTGAAGGAGAACTACTAGTACCACAGAAATATATTCTCAAAGATGGTGTCCCACTTCCAAATGCTTCTGTTGAGTTGATGGATGTTCCAGTTATTGATCTTGGTCTCCTTACACCTTCCTCAATCAGTGTGGAAGAACTTGACAAATTCGGATCAGCTCTTAGTAGAGGGTGTTGCTTTTATGTATAA

Protein Analysis

84

Amino Acids

9.03

Weight (kDa)

4.34

Isoelectric Point (pI)

53.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029806)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0087221
rosa_samantha Rh2AG026800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 226
AcsI RAATTY 1 cut(s) 212
AcuI CTGAAG 1 cut(s) 90
AfaI GTAC 1 cut(s) 87
AhlI ACTAGT 1 cut(s) 82
AluBI AGCT 1 cut(s) 224
AluI AGCT 1 cut(s) 224
Alw26I GTCTC 1 cut(s) 176
AlwI GGATC 1 cut(s) 226
ApoI RAATTY 1 cut(s) 212
ArsI GACNNNNNNTTYG 2 cut(s) 99, 131
BarI GAAGNNNNNNTAC 2 cut(s) 63, 95
BccI CCATC 2 cut(s) 104, 139
BcoDI GTCTC 1 cut(s) 176
BcuI ACTAGT 1 cut(s) 82
BfaI CTAG 1 cut(s) 83
BsaI GGTCTC 1 cut(s) 176
BsaJI CCNNGG 1 cut(s) 24
Bse1I ACTGG 1 cut(s) 155
BseDI CCNNGG 1 cut(s) 24
BseGI GGATG 1 cut(s) 154
BseNI ACTGG 1 cut(s) 155
BslFI GGGAC 1 cut(s) 101
BsmAI GTCTC 1 cut(s) 176
BsmFI GGGAC 1 cut(s) 101
Bso31I GGTCTC 1 cut(s) 176
Bsp143I GATC 2 cut(s) 163, 218
BspPI GGATC 1 cut(s) 226
BspTNI GGTCTC 1 cut(s) 176
BsrI ACTGG 1 cut(s) 155
BssECI CCNNGG 1 cut(s) 24
BssMI GATC 2 cut(s) 163, 218
BssT1I CCWWGG 1 cut(s) 24
Bst4CI ACNGT 1 cut(s) 52
BstDEI CTNAG 1 cut(s) 227
BstF5I GGATG 1 cut(s) 154
BstKTI GATC 2 cut(s) 166, 221
BstMAI GTCTC 1 cut(s) 176
BstMBI GATC 2 cut(s) 163, 218
BtsCI GGATG 1 cut(s) 154
BtsIMutI CAGTG 2 cut(s) 66, 199
Csp6I GTAC 1 cut(s) 86
CspCI CAANNNNNGTGG 2 cut(s) 177, 212
CviJI RGCY 2 cut(s) 5, 224
CviKI_1 RGCY 2 cut(s) 5, 224
CviQI GTAC 1 cut(s) 86
DdeI CTNAG 1 cut(s) 227
DpnI GATC 2 cut(s) 165, 220
DpnII GATC 2 cut(s) 163, 218
Eco130I CCWWGG 1 cut(s) 24
Eco31I GGTCTC 1 cut(s) 176
Eco57I CTGAAG 1 cut(s) 90
EcoT14I CCWWGG 1 cut(s) 24
ErhI CCWWGG 1 cut(s) 24
FaiI YATR 3 cut(s) 99, 249, 253
FaqI GGGAC 1 cut(s) 101
FokI GGATG 1 cut(s) 161
FspBI CTAG 1 cut(s) 83
HinfI GANTC 1 cut(s) 8
Hpy188I TCNGA 1 cut(s) 218
HpyAV CCTTC 2 cut(s) 65, 192
HpyCH4III ACNGT 1 cut(s) 52
HpyCH4V TGCA 1 cut(s) 55
HpyF3I CTNAG 1 cut(s) 227
Kzo9I GATC 2 cut(s) 163, 218
LpnPI CCDG 2 cut(s) 33, 168
MaeI CTAG 1 cut(s) 83
MalI GATC 2 cut(s) 165, 220
MboI GATC 2 cut(s) 163, 218
MboII GAAGA 1 cut(s) 212
MluCI AATT 1 cut(s) 212
MnlI CCTC 2 cut(s) 196, 227
MseI TTAA 1 cut(s) 35
NdeII GATC 2 cut(s) 163, 218
PfeI GAWTC 1 cut(s) 8
PsrI GAACNNNNNNTAC 2 cut(s) 69, 101
RsaI GTAC 1 cut(s) 87
RsaNI GTAC 1 cut(s) 86
SaqAI TTAA 1 cut(s) 35
Sau3AI GATC 2 cut(s) 163, 218
SetI ASST 3 cut(s) 30, 184, 226
SgeI CNNG 8 cut(s) 32, 37, 43, 68, 95, 167, 179, 218
SpeI ACTAGT 1 cut(s) 82
Sse9I AATT 1 cut(s) 212
SspMI CTAG 1 cut(s) 83
StyI CCWWGG 1 cut(s) 24
TaaI ACNGT 1 cut(s) 52
TaqI TCGA 1 cut(s) 30
TasI AATT 1 cut(s) 212
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 1 cut(s) 35
Tru9I TTAA 1 cut(s) 35
TscAI CASTG 2 cut(s) 73, 199
TspRI CASTG 2 cut(s) 73, 199
XapI RAATTY 1 cut(s) 212
XspI CTAG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.