RchiOBHm_Chr3g0465221

Aldo-keto reductase family 4 member

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
12066746 .. 12070189
3444 bp
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UTR
Exon/CDS
Intron
PRQ43138

Sequence Viewer

Length: 210 bp
ATGGGTCATAGCGTTCTTCCAAAGAGTACTAATGAAGCAAGGATCAAGGAGAATCTCGATGTCTTTGGCTGGTCTATCCCAGAGGACTTGTTGCCAAGTTTTCTGAAATTGAGCAGGCAAGGCTGCTTAGAGGGAACTCATTTGTTCATGACACTTTTGGACCCTATAGAAGTGTTGAAGAACTATGGGATGGTGAAATCTAGAAAGTAA

Protein Analysis

69

Amino Acids

7.83

Weight (kDa)

7.92

Isoelectric Point (pI)

32.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0029944)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr3g0465221
rosa_samantha Rh3DG141200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 50
AfaI GTAC 1 cut(s) 28
AgsI TTSAA 1 cut(s) 178
AlwI GGATC 1 cut(s) 50
ApeKI GCWGC 1 cut(s) 123
AspS9I GGNCC 1 cut(s) 160
AsuHPI GGTGA 1 cut(s) 205
AvaII GGWCC 1 cut(s) 160
BbvI GCAGC 1 cut(s) 110
BccI CCATC 1 cut(s) 184
BfaI CTAG 1 cut(s) 201
BfmI CTRYAG 1 cut(s) 165
BisI GCNGC 1 cut(s) 124
BlsI GCNGC 1 cut(s) 125
BmcAI AGTACT 1 cut(s) 28
Bme18I GGWCC 1 cut(s) 160
BmgT120I GGNCC 1 cut(s) 160
BmiI GGNNCC 1 cut(s) 162
BseGI GGATG 1 cut(s) 195
BseXI GCAGC 1 cut(s) 110
Bsp143I GATC 1 cut(s) 42
BspHI TCATGA 1 cut(s) 147
BspLI GGNNCC 1 cut(s) 162
BspPI GGATC 1 cut(s) 50
BssMI GATC 1 cut(s) 42
BstC8I GCNNGC 1 cut(s) 116
BstDEI CTNAG 1 cut(s) 127
BstF5I GGATG 1 cut(s) 195
BstKTI GATC 1 cut(s) 45
BstMBI GATC 1 cut(s) 42
BstMWI GCNNNNNNNGC 1 cut(s) 120
BstSFI CTRYAG 1 cut(s) 165
BstV1I GCAGC 1 cut(s) 110
BtsCI GGATG 1 cut(s) 195
Cac8I GCNNGC 1 cut(s) 116
CciI TCATGA 1 cut(s) 147
Cfr13I GGNCC 1 cut(s) 160
Csp6I GTAC 1 cut(s) 27
CviAII CATG 1 cut(s) 148
CviJI RGCY 2 cut(s) 69, 123
CviKI_1 RGCY 2 cut(s) 69, 123
CviQI GTAC 1 cut(s) 27
DdeI CTNAG 1 cut(s) 127
DpnI GATC 1 cut(s) 44
DpnII GATC 1 cut(s) 42
Eco47I GGWCC 1 cut(s) 160
FaeI CATG 1 cut(s) 151
FaiI YATR 4 cut(s) 9, 149, 167, 186
FatI CATG 1 cut(s) 147
Fnu4HI GCNGC 1 cut(s) 124
FokI GGATG 1 cut(s) 202
Fsp4HI GCNGC 1 cut(s) 124
FspBI CTAG 1 cut(s) 201
GluI GCNGC 1 cut(s) 124
Hin1II CATG 1 cut(s) 151
HinfI GANTC 1 cut(s) 52
HphI GGTGA 1 cut(s) 205
Hpy188I TCNGA 1 cut(s) 105
Hpy188III TCNNGA 3 cut(s) 56, 148, 201
HpyF10VI GCNNNNNNNGC 1 cut(s) 120
HpyF3I CTNAG 1 cut(s) 127
Hsp92II CATG 1 cut(s) 151
Kzo9I GATC 1 cut(s) 42
LpnPI CCDG 3 cut(s) 55, 93, 100
Lsp1109I GCAGC 1 cut(s) 110
MaeI CTAG 1 cut(s) 201
MalI GATC 1 cut(s) 44
MboI GATC 1 cut(s) 42
MboII GAAGA 2 cut(s) 8, 190
MluCI AATT 1 cut(s) 107
MnlI CCTC 2 cut(s) 76, 124
MwoI GCNNNNNNNGC 1 cut(s) 120
NdeII GATC 1 cut(s) 42
NlaIII CATG 1 cut(s) 151
NlaIV GGNNCC 1 cut(s) 162
PagI TCATGA 1 cut(s) 147
PfeI GAWTC 1 cut(s) 52
PkrI GCNGC 1 cut(s) 125
PspN4I GGNNCC 1 cut(s) 162
PspPI GGNCC 1 cut(s) 160
RsaI GTAC 1 cut(s) 28
RsaNI GTAC 1 cut(s) 27
SatI GCNGC 1 cut(s) 124
Sau3AI GATC 1 cut(s) 42
Sau96I GGNCC 1 cut(s) 160
ScaI AGTACT 1 cut(s) 28
SfcI CTRYAG 1 cut(s) 165
SinI GGWCC 1 cut(s) 160
Sse9I AATT 1 cut(s) 107
SspMI CTAG 1 cut(s) 201
TaqI TCGA 1 cut(s) 57
TasI AATT 1 cut(s) 107
TatI WGTACW 1 cut(s) 26
TfiI GAWTC 1 cut(s) 52
TseI GCWGC 1 cut(s) 123
TspDTI ATGAA 2 cut(s) 48, 136
VpaK11BI GGWCC 1 cut(s) 160
XbaI TCTAGA 1 cut(s) 200
XspI CTAG 1 cut(s) 201
ZrmI AGTACT 1 cut(s) 28
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.