RchiOBHm_Chr4g0430781

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
55178166 .. 55178495
330 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39949

Sequence Viewer

Length: 330 bp
ATGTCAGTATCACCAAGGTGGAGAAAGCTTCGCAAAATATGCAGCTCCCAATTGTTTGCCACCAAAGTTCTTGATGCCAACCAAGCGAATCGGCGAGTGAAAGTGCAAGTTGAGAGCATGGTACATGGTGTGGCAGTGGATATTGAAGAGGCTGCTTTTAAAACTATCGTCAATTTGCTGTCAAGGACTATTTTCTCTTTCGAGTTGGCTGCTACTGAAAGTAGTAGTAGTGAGATGGCCAGAGGGTACAATGAGATTGTTTGGGGCTTAATGGAAGAGGTTGGGAAACCAAATTTGGGGGACTATTTTCCTATGCTTCCGGAAGCTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

109

Amino Acids

12.22

Weight (kDa)

6.58

Isoelectric Point (pI)

49.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030058)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0430781
rosa_multiflora Rmu_sc0000131.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 319
AcoI YGGCCR 1 cut(s) 237
AcsI RAATTY 1 cut(s) 292
AfaI GTAC 2 cut(s) 123, 248
AfiI CCNNNNNNNGG 1 cut(s) 296
AgsI TTSAA 1 cut(s) 146
AjuI GAANNNNNNNTTGG 2 cut(s) 278, 310
AleI CACNNNNGTG 1 cut(s) 16
AluBI AGCT 3 cut(s) 28, 45, 326
AluI AGCT 3 cut(s) 28, 45, 326
Aor13HI TCCGGA 1 cut(s) 319
AoxI GGCC 1 cut(s) 237
ApeKI GCWGC 3 cut(s) 42, 152, 209
ApoI RAATTY 1 cut(s) 292
AsuHPI GGTGA 1 cut(s) 3
BalI TGGCCA 1 cut(s) 239
BbvI GCAGC 3 cut(s) 54, 139, 196
BccI CCATC 1 cut(s) 229
BcgI CGANNNNNNTGC 2 cut(s) 191, 225
BisI GCNGC 3 cut(s) 43, 153, 210
BlsI GCNGC 3 cut(s) 44, 154, 211
BmsI GCATC 1 cut(s) 64
BsaJI CCNNGG 1 cut(s) 14
BsaWI WCCGGW 1 cut(s) 319
Bsc4I CCNNNNNNNGG 1 cut(s) 296
BseAI TCCGGA 1 cut(s) 319
BseDI CCNNGG 1 cut(s) 14
BseLI CCNNNNNNNGG 1 cut(s) 296
BseXI GCAGC 3 cut(s) 54, 139, 196
BshFI GGCC 1 cut(s) 239
BsiSI CCGG 1 cut(s) 320
BslFI GGGAC 1 cut(s) 314
BslI CCNNNNNNNGG 1 cut(s) 296
BsmFI GGGAC 1 cut(s) 314
BsnI GGCC 1 cut(s) 239
Bsp13I TCCGGA 1 cut(s) 319
BspANI GGCC 1 cut(s) 239
BspEI TCCGGA 1 cut(s) 319
BssECI CCNNGG 1 cut(s) 14
BssT1I CCWWGG 1 cut(s) 14
Bst6I CTCTTC 2 cut(s) 141, 270
BstAPI GCANNNNNTGC 1 cut(s) 39
BstMWI GCNNNNNNNGC 2 cut(s) 39, 83
BstV1I GCAGC 3 cut(s) 54, 139, 196
BsuRI GGCC 1 cut(s) 239
BtsI GCAGTG 1 cut(s) 141
BtsIMutI CAGTG 1 cut(s) 141
Csp6I GTAC 2 cut(s) 122, 247
CviAII CATG 2 cut(s) 118, 125
CviJI RGCY 7 cut(s) 28, 45, 152, 209, 239, 267, 326
CviKI_1 RGCY 7 cut(s) 28, 45, 152, 209, 239, 267, 326
CviQI GTAC 2 cut(s) 122, 247
DraI TTTAAA 1 cut(s) 160
EaeI YGGCCR 1 cut(s) 237
Eam1104I CTCTTC 2 cut(s) 141, 270
EarI CTCTTC 2 cut(s) 141, 270
Eco130I CCWWGG 1 cut(s) 14
EcoT14I CCWWGG 1 cut(s) 14
ErhI CCWWGG 1 cut(s) 14
FaeI CATG 2 cut(s) 121, 128
FaiI YATR 4 cut(s) 40, 119, 126, 314
FaqI GGGAC 1 cut(s) 314
FatI CATG 2 cut(s) 117, 124
Fnu4HI GCNGC 3 cut(s) 43, 153, 210
Fsp4HI GCNGC 3 cut(s) 43, 153, 210
GluI GCNGC 3 cut(s) 43, 153, 210
HaeIII GGCC 1 cut(s) 239
HapII CCGG 1 cut(s) 320
Hin1II CATG 2 cut(s) 121, 128
HindIII AAGCTT 2 cut(s) 26, 324
HinfI GANTC 1 cut(s) 88
HpaII CCGG 1 cut(s) 320
HphI GGTGA 1 cut(s) 3
Hpy188III TCNNGA 2 cut(s) 71, 320
HpyCH4V TGCA 2 cut(s) 42, 106
HpyF10VI GCNNNNNNNGC 2 cut(s) 39, 83
Hsp92II CATG 2 cut(s) 121, 128
Kpn2I TCCGGA 1 cut(s) 319
LmnI GCTCC 1 cut(s) 50
LpnPI CCDG 1 cut(s) 253
Lsp1109I GCAGC 3 cut(s) 54, 139, 196
LweI GCATC 1 cut(s) 64
MboII GAAGA 2 cut(s) 158, 287
MfeI CAATTG 1 cut(s) 50
MlsI TGGCCA 1 cut(s) 239
MluCI AATT 3 cut(s) 50, 172, 292
MluNI TGGCCA 1 cut(s) 239
MnlI CCTC 3 cut(s) 142, 236, 271
Mox20I TGGCCA 1 cut(s) 239
MroI TCCGGA 1 cut(s) 319
MscI TGGCCA 1 cut(s) 239
MseI TTAA 2 cut(s) 159, 269
MslI CAYNNNNRTG 1 cut(s) 16
Msp20I TGGCCA 1 cut(s) 239
MspI CCGG 1 cut(s) 320
MunI CAATTG 1 cut(s) 50
MwoI GCNNNNNNNGC 2 cut(s) 39, 83
NlaIII CATG 2 cut(s) 121, 128
OliI CACNNNNGTG 1 cut(s) 16
PfeI GAWTC 1 cut(s) 88
PkrI GCNGC 3 cut(s) 44, 154, 211
RsaI GTAC 2 cut(s) 123, 248
RsaNI GTAC 2 cut(s) 122, 247
RseI CAYNNNNRTG 1 cut(s) 16
SaqAI TTAA 2 cut(s) 159, 269
SatI GCNGC 3 cut(s) 43, 153, 210
SetI ASST 5 cut(s) 20, 30, 47, 282, 328
SfaNI GCATC 1 cut(s) 64
SmiMI CAYNNNNRTG 1 cut(s) 16
Sse9I AATT 3 cut(s) 50, 172, 292
StyI CCWWGG 1 cut(s) 14
TaqI TCGA 1 cut(s) 201
TasI AATT 3 cut(s) 50, 172, 292
TfiI GAWTC 1 cut(s) 88
Tru1I TTAA 2 cut(s) 159, 269
Tru9I TTAA 2 cut(s) 159, 269
TscAI CASTG 1 cut(s) 141
TseI GCWGC 3 cut(s) 42, 152, 209
TspRI CASTG 1 cut(s) 141
XapI RAATTY 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.