Ubiquitin carboxyl-terminal hydrolase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0026451 |
| rosa_samantha | Rh5DG185300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 10 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 113 |
| AgsI | TTSAA | 2 cut(s) | 193, 215 |
| Alw26I | GTCTC | 2 cut(s) | 56, 241 |
| AsuC2I | CCSGG | 1 cut(s) | 93 |
| AsuHPI | GGTGA | 3 cut(s) | 81, 128, 209 |
| BbsI | GAAGAC | 1 cut(s) | 264 |
| BceAI | ACGGC | 1 cut(s) | 85 |
| BcnI | CCSGG | 1 cut(s) | 93 |
| BcoDI | GTCTC | 2 cut(s) | 56, 241 |
| BlpI | GCTNAGC | 1 cut(s) | 222 |
| Bme1390I | CCNGG | 1 cut(s) | 93 |
| BmrFI | CCNGG | 1 cut(s) | 93 |
| BpiI | GAAGAC | 1 cut(s) | 264 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 222 |
| BpuMI | CCSGG | 1 cut(s) | 93 |
| BsaI | GGTCTC | 1 cut(s) | 56 |
| BsaJI | CCNNGG | 1 cut(s) | 92 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 113 |
| Bse1I | ACTGG | 1 cut(s) | 125 |
| Bse3DI | GCAATG | 1 cut(s) | 71 |
| BseDI | CCNNGG | 1 cut(s) | 92 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 113 |
| BseMI | GCAATG | 1 cut(s) | 71 |
| BseMII | CTCAG | 1 cut(s) | 213 |
| BseNI | ACTGG | 1 cut(s) | 125 |
| BsiSI | CCGG | 1 cut(s) | 92 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 113 |
| BsmAI | GTCTC | 2 cut(s) | 56, 241 |
| Bso31I | GGTCTC | 1 cut(s) | 56 |
| Bsp1407I | TGTACA | 1 cut(s) | 8 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 222 |
| BspCNI | CTCAG | 1 cut(s) | 214 |
| BspTNI | GGTCTC | 1 cut(s) | 56 |
| BsrDI | GCAATG | 1 cut(s) | 71 |
| BsrGI | TGTACA | 1 cut(s) | 8 |
| BsrI | ACTGG | 1 cut(s) | 125 |
| BssECI | CCNNGG | 1 cut(s) | 92 |
| Bst4CI | ACNGT | 1 cut(s) | 13 |
| BstAUI | TGTACA | 1 cut(s) | 8 |
| BstDEI | CTNAG | 1 cut(s) | 222 |
| BstMAI | GTCTC | 2 cut(s) | 56, 241 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 82 |
| BstSCI | CCNGG | 1 cut(s) | 91 |
| BstV2I | GAAGAC | 1 cut(s) | 264 |
| BtsIMutI | CAGTG | 1 cut(s) | 132 |
| Csp6I | GTAC | 1 cut(s) | 9 |
| CviJI | RGCY | 2 cut(s) | 100, 221 |
| CviKI_1 | RGCY | 2 cut(s) | 100, 221 |
| CviQI | GTAC | 1 cut(s) | 9 |
| DdeI | CTNAG | 1 cut(s) | 222 |
| DraI | TTTAAA | 1 cut(s) | 81 |
| Eco31I | GGTCTC | 1 cut(s) | 56 |
| FaiI | YATR | 3 cut(s) | 27, 38, 110 |
| HapII | CCGG | 1 cut(s) | 92 |
| HinfI | GANTC | 2 cut(s) | 131, 200 |
| HpaII | CCGG | 1 cut(s) | 92 |
| HphI | GGTGA | 3 cut(s) | 81, 128, 209 |
| Hpy99I | CGWCG | 1 cut(s) | 106 |
| HpyAV | CCTTC | 1 cut(s) | 106 |
| HpyCH4III | ACNGT | 1 cut(s) | 13 |
| HpyCH4IV | ACGT | 1 cut(s) | 138 |
| HpyCH4V | TGCA | 3 cut(s) | 145, 233, 264 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 82 |
| HpyF3I | CTNAG | 1 cut(s) | 222 |
| HpySE526I | ACGT | 1 cut(s) | 138 |
| LpnPI | CCDG | 3 cut(s) | 105, 138, 256 |
| MaeII | ACGT | 1 cut(s) | 138 |
| MaeIII | GTNAC | 1 cut(s) | 166 |
| MboII | GAAGA | 1 cut(s) | 269 |
| MluCI | AATT | 1 cut(s) | 228 |
| MseI | TTAA | 1 cut(s) | 80 |
| MspI | CCGG | 1 cut(s) | 92 |
| MspR9I | CCNGG | 1 cut(s) | 93 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 82 |
| NciI | CCSGG | 1 cut(s) | 93 |
| PfeI | GAWTC | 2 cut(s) | 131, 200 |
| PflFI | GACNNNGTC | 1 cut(s) | 67 |
| PsyI | GACNNNGTC | 1 cut(s) | 67 |
| RsaI | GTAC | 1 cut(s) | 10 |
| RsaNI | GTAC | 1 cut(s) | 9 |
| SaqAI | TTAA | 1 cut(s) | 80 |
| ScrFI | CCNGG | 1 cut(s) | 93 |
| SetI | ASST | 1 cut(s) | 141 |
| SgeI | CNNG | 4 cut(s) | 79, 104, 105, 137 |
| Sse9I | AATT | 1 cut(s) | 228 |
| StyD4I | CCNGG | 1 cut(s) | 91 |
| TaaI | ACNGT | 1 cut(s) | 13 |
| TaiI | ACGT | 1 cut(s) | 141 |
| TaqI | TCGA | 1 cut(s) | 155 |
| TasI | AATT | 1 cut(s) | 228 |
| TatI | WGTACW | 1 cut(s) | 8 |
| TfiI | GAWTC | 2 cut(s) | 131, 200 |
| Tru1I | TTAA | 1 cut(s) | 80 |
| Tru9I | TTAA | 1 cut(s) | 80 |
| TscAI | CASTG | 1 cut(s) | 132 |
| TspDTI | ATGAA | 3 cut(s) | 25, 125, 270 |
| TspGWI | ACGGA | 1 cut(s) | 185 |
| TspRI | CASTG | 1 cut(s) | 132 |
| Tth111I | GACNNNGTC | 1 cut(s) | 67 |