Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0027521 |
| rosa_samantha | Rh5DG193300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 246 |
| AcoI | YGGCCR | 1 cut(s) | 106 |
| AcsI | RAATTY | 1 cut(s) | 338 |
| AcuI | CTGAAG | 1 cut(s) | 60 |
| AgsI | TTSAA | 5 cut(s) | 164, 194, 202, 408, 427 |
| AluBI | AGCT | 1 cut(s) | 224 |
| AluI | AGCT | 1 cut(s) | 224 |
| Alw26I | GTCTC | 2 cut(s) | 104, 215 |
| AoxI | GGCC | 2 cut(s) | 106, 125 |
| ApaI | GGGCCC | 1 cut(s) | 129 |
| ApoI | RAATTY | 1 cut(s) | 338 |
| AspS9I | GGNCC | 2 cut(s) | 125, 126 |
| AsuHPI | GGTGA | 1 cut(s) | 338 |
| BaeGI | GKGCMC | 1 cut(s) | 129 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 404, 437 |
| BalI | TGGCCA | 1 cut(s) | 108 |
| BanII | GRGCYC | 1 cut(s) | 129 |
| BccI | CCATC | 1 cut(s) | 83 |
| BceAI | ACGGC | 1 cut(s) | 98 |
| BclI | TGATCA | 2 cut(s) | 73, 379 |
| BcoDI | GTCTC | 2 cut(s) | 104, 215 |
| BmgT120I | GGNCC | 2 cut(s) | 125, 126 |
| BmiI | GGNNCC | 1 cut(s) | 127 |
| BmsI | GCATC | 1 cut(s) | 160 |
| BpuEI | CTTGAG | 1 cut(s) | 197 |
| BsaI | GGTCTC | 2 cut(s) | 104, 215 |
| BsaJI | CCNNGG | 2 cut(s) | 103, 121 |
| Bse1I | ACTGG | 1 cut(s) | 52 |
| Bse3DI | GCAATG | 1 cut(s) | 369 |
| BseDI | CCNNGG | 2 cut(s) | 103, 121 |
| BseGI | GGATG | 1 cut(s) | 94 |
| BseMI | GCAATG | 1 cut(s) | 369 |
| BseMII | CTCAG | 1 cut(s) | 332 |
| BseNI | ACTGG | 1 cut(s) | 52 |
| BseSI | GKGCMC | 1 cut(s) | 129 |
| BshFI | GGCC | 2 cut(s) | 108, 127 |
| BslFI | GGGAC | 1 cut(s) | 58 |
| BsmAI | GTCTC | 2 cut(s) | 104, 215 |
| BsmFI | GGGAC | 1 cut(s) | 58 |
| BsnI | GGCC | 2 cut(s) | 108, 127 |
| Bso31I | GGTCTC | 2 cut(s) | 104, 215 |
| Bsp120I | GGGCCC | 1 cut(s) | 125 |
| Bsp1286I | GDGCHC | 1 cut(s) | 129 |
| Bsp143I | GATC | 4 cut(s) | 73, 239, 301, 379 |
| Bsp19I | CCATGG | 1 cut(s) | 103 |
| BspACI | CCGC | 1 cut(s) | 246 |
| BspANI | GGCC | 2 cut(s) | 108, 127 |
| BspCNI | CTCAG | 1 cut(s) | 331 |
| BspLI | GGNNCC | 1 cut(s) | 127 |
| BspTNI | GGTCTC | 2 cut(s) | 104, 215 |
| BsrDI | GCAATG | 1 cut(s) | 369 |
| BsrI | ACTGG | 1 cut(s) | 52 |
| BssECI | CCNNGG | 2 cut(s) | 103, 121 |
| BssMI | GATC | 4 cut(s) | 73, 239, 301, 379 |
| BssT1I | CCWWGG | 2 cut(s) | 103, 121 |
| Bst4CI | ACNGT | 2 cut(s) | 346, 376 |
| BstDEI | CTNAG | 1 cut(s) | 318 |
| BstDSI | CCRYGG | 1 cut(s) | 103 |
| BstF5I | GGATG | 1 cut(s) | 94 |
| BstKTI | GATC | 4 cut(s) | 76, 242, 304, 382 |
| BstMAI | GTCTC | 2 cut(s) | 104, 215 |
| BstMBI | GATC | 4 cut(s) | 73, 239, 301, 379 |
| BstSLI | GKGCMC | 1 cut(s) | 129 |
| BsuRI | GGCC | 2 cut(s) | 108, 127 |
| BtgI | CCRYGG | 1 cut(s) | 103 |
| BtsCI | GGATG | 1 cut(s) | 94 |
| BtsI | GCAGTG | 1 cut(s) | 100 |
| BtsIMutI | CAGTG | 4 cut(s) | 27, 60, 100, 342 |
| Cfr13I | GGNCC | 2 cut(s) | 125, 126 |
| CviAII | CATG | 3 cut(s) | 104, 150, 243 |
| CviJI | RGCY | 5 cut(s) | 108, 127, 224, 435, 462 |
| CviKI_1 | RGCY | 5 cut(s) | 108, 127, 224, 435, 462 |
| DdeI | CTNAG | 1 cut(s) | 318 |
| DpnI | GATC | 4 cut(s) | 75, 241, 303, 381 |
| DpnII | GATC | 4 cut(s) | 73, 239, 301, 379 |
| EaeI | YGGCCR | 1 cut(s) | 106 |
| Eco130I | CCWWGG | 2 cut(s) | 103, 121 |
| Eco24I | GRGCYC | 1 cut(s) | 129 |
| Eco31I | GGTCTC | 2 cut(s) | 104, 215 |
| Eco57I | CTGAAG | 1 cut(s) | 60 |
| EcoT14I | CCWWGG | 2 cut(s) | 103, 121 |
| EcoT22I | ATGCAT | 1 cut(s) | 155 |
| EcoT38I | GRGCYC | 1 cut(s) | 129 |
| ErhI | CCWWGG | 2 cut(s) | 103, 121 |
| FaeI | CATG | 3 cut(s) | 107, 153, 246 |
| FaiI | YATR | 6 cut(s) | 105, 151, 244, 275, 295, 360 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 124, 156, 210, 242 |
| FaqI | GGGAC | 1 cut(s) | 58 |
| FatI | CATG | 3 cut(s) | 103, 149, 242 |
| FbaI | TGATCA | 2 cut(s) | 73, 379 |
| FokI | GGATG | 1 cut(s) | 101 |
| FriOI | GRGCYC | 1 cut(s) | 129 |
| HaeIII | GGCC | 2 cut(s) | 108, 127 |
| Hin1II | CATG | 3 cut(s) | 107, 153, 246 |
| HinfI | GANTC | 3 cut(s) | 312, 387, 419 |
| HphI | GGTGA | 1 cut(s) | 338 |
| Hpy166II | GTNNAC | 1 cut(s) | 349 |
| Hpy188I | TCNGA | 5 cut(s) | 31, 40, 82, 285, 321 |
| Hpy188III | TCNNGA | 2 cut(s) | 182, 214 |
| Hpy8I | GTNNAC | 1 cut(s) | 349 |
| HpyAV | CCTTC | 3 cut(s) | 35, 196, 200 |
| HpyCH4III | ACNGT | 2 cut(s) | 346, 376 |
| HpyCH4IV | ACGT | 2 cut(s) | 166, 445 |
| HpyCH4V | TGCA | 3 cut(s) | 153, 362, 367 |
| HpyF3I | CTNAG | 1 cut(s) | 318 |
| HpySE526I | ACGT | 2 cut(s) | 166, 445 |
| Hsp92II | CATG | 3 cut(s) | 107, 153, 246 |
| Ksp22I | TGATCA | 2 cut(s) | 73, 379 |
| Kzo9I | GATC | 4 cut(s) | 73, 239, 301, 379 |
| LpnPI | CCDG | 6 cut(s) | 33, 84, 167, 353, 368, 429 |
| LweI | GCATC | 1 cut(s) | 160 |
| MaeII | ACGT | 2 cut(s) | 166, 445 |
| MalI | GATC | 4 cut(s) | 75, 241, 303, 381 |
| MboI | GATC | 4 cut(s) | 73, 239, 301, 379 |
| MboII | GAAGA | 1 cut(s) | 206 |
| MhlI | GDGCHC | 1 cut(s) | 129 |
| MlsI | TGGCCA | 1 cut(s) | 108 |
| MluCI | AATT | 5 cut(s) | 16, 83, 197, 338, 456 |
| MluNI | TGGCCA | 1 cut(s) | 108 |
| MlyI | GAGTC | 2 cut(s) | 306, 428 |
| MmeI | TCCRAC | 1 cut(s) | 289 |
| MnlI | CCTC | 1 cut(s) | 253 |
| Mox20I | TGGCCA | 1 cut(s) | 108 |
| Mph1103I | ATGCAT | 1 cut(s) | 155 |
| MscI | TGGCCA | 1 cut(s) | 108 |
| MseI | TTAA | 2 cut(s) | 15, 450 |
| Msp20I | TGGCCA | 1 cut(s) | 108 |
| NcoI | CCATGG | 1 cut(s) | 103 |
| NdeII | GATC | 4 cut(s) | 73, 239, 301, 379 |
| NlaIII | CATG | 3 cut(s) | 107, 153, 246 |
| NlaIV | GGNNCC | 1 cut(s) | 127 |
| NsiI | ATGCAT | 1 cut(s) | 155 |
| PfeI | GAWTC | 1 cut(s) | 387 |
| PleI | GAGTC | 2 cut(s) | 306, 427 |
| PpsI | GAGTC | 2 cut(s) | 306, 427 |
| PspN4I | GGNNCC | 1 cut(s) | 127 |
| PspOMI | GGGCCC | 1 cut(s) | 125 |
| PspPI | GGNCC | 2 cut(s) | 125, 126 |
| SaqAI | TTAA | 2 cut(s) | 15, 450 |
| Sau3AI | GATC | 4 cut(s) | 73, 239, 301, 379 |
| Sau96I | GGNCC | 2 cut(s) | 125, 126 |
| SchI | GAGTC | 2 cut(s) | 306, 428 |
| SduI | GDGCHC | 1 cut(s) | 129 |
| SetI | ASST | 6 cut(s) | 169, 211, 226, 264, 293, 448 |
| SfaNI | GCATC | 1 cut(s) | 160 |
| SmlI | CTYRAG | 1 cut(s) | 212 |
| SmoI | CTYRAG | 1 cut(s) | 212 |
| Sse9I | AATT | 5 cut(s) | 16, 83, 197, 338, 456 |
| SsiI | CCGC | 1 cut(s) | 246 |
| StyI | CCWWGG | 2 cut(s) | 103, 121 |
| TaaI | ACNGT | 2 cut(s) | 346, 376 |
| TaiI | ACGT | 2 cut(s) | 169, 448 |
| TasI | AATT | 5 cut(s) | 16, 83, 197, 338, 456 |
| TfiI | GAWTC | 1 cut(s) | 387 |
| Tru1I | TTAA | 2 cut(s) | 15, 450 |
| Tru9I | TTAA | 2 cut(s) | 15, 450 |
| TscAI | CASTG | 4 cut(s) | 27, 60, 100, 349 |
| TspDTI | ATGAA | 3 cut(s) | 138, 345, 427 |
| TspRI | CASTG | 4 cut(s) | 27, 60, 100, 349 |
| XapI | RAATTY | 1 cut(s) | 338 |
| Zsp2I | ATGCAT | 1 cut(s) | 155 |