RchiOBHm_Chr6g0255921

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
11345897 .. 11346877
981 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22954

Sequence Viewer

Length: 789 bp
ATGTTCACTTTGTATGCTACATTGAGTGTGATGATAAATCAACCACACAAGAAATTGTTATCTGAAACAGAATCTATTGTGATTCCTGGTTTCGGTGATGAGATCAAGATGACAGGAAACCAAATAGCAGATTTCTTTAAGCTATATGATGATGCAGAATTTACCAAGTTTTTAAAAGCAGGCTTAGAGCATGAAGAAATGAGCTATGGAGCAGCAGAAGAAAGAGCCAAGAGGGGATTAGTGGAAAGCTCTGCTGCTGAGCAACACCAGTGCTTGAAATGGCTTGATTCTAAGAAACCCAATTCAGTTGTATATGTATGTTTCAGAAGCATGATCAACTTAGCTGGCTGTCAGCTCCTAGAAATTGCAGCAGGCCTTGAGGCTTCTGGACAAGACTTCATTTGGGTTGTGAAGAAACAAAAGAAAGAGATAGAAGAGTGGTGGCCTGAAGGATTTGGGAAGAGAATGGAAGGTAAGGGATTGATTATAAGAGATTGGGCTCCTCAAGCGCTAATTCTTGAGCATGAAGCAGTAGGAGCTTTTCTCTTTATTATTAAGTTGGTGACGCAGATACTCTGTGTTAGGGTTGTTGTTGGTGCTGAAAAAAGGGTTTCATTTGTGGATAGAAGTTTGAAGAGTGAGGCCCGTGTGAAGAGGGAGGCCATTGAGAGGGCCAAGACAAGAATCATGGTGGGTGATGATGTAGAGGAAATGAGAAACAGAGTTAAAGTGCTTGGAGAGATGACAAACAAGGCTATTGAAGAAGGTGGTTCATCTTTTCAGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

262

Amino Acids

29.62

Weight (kDa)

6.18

Isoelectric Point (pI)

36.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030324)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0252071 RchiOBHm_Chr6g0255921

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 488
AcsI RAATTY 1 cut(s) 158
AcuI CTGAAG 1 cut(s) 468
AfeI AGCGCT 1 cut(s) 510
AfiI CCNNNNNNNGG 2 cut(s) 92, 669
AgsI TTSAA 3 cut(s) 277, 634, 761
AjnI CCWGG 1 cut(s) 85
AluBI AGCT 6 cut(s) 142, 204, 249, 344, 355, 539
AluI AGCT 6 cut(s) 142, 204, 249, 344, 355, 539
Aor51HI AGCGCT 1 cut(s) 510
AoxI GGCC 5 cut(s) 373, 443, 642, 660, 672
ApeKI GCWGC 3 cut(s) 212, 254, 368
ApoI RAATTY 1 cut(s) 158
AspLEI GCGC 1 cut(s) 511
AspS9I GGNCC 2 cut(s) 643, 672
AsuHPI GGTGA 3 cut(s) 107, 574, 707
BanII GRGCYC 1 cut(s) 502
BbvI GCAGC 3 cut(s) 224, 241, 380
BciT130I CCWGG 1 cut(s) 87
BclI TGATCA 1 cut(s) 333
BfaI CTAG 1 cut(s) 359
BfoI RGCGCY 1 cut(s) 512
BisI GCNGC 3 cut(s) 213, 255, 369
BlpI GCTNAGC 1 cut(s) 258
BlsI GCNGC 3 cut(s) 214, 256, 370
Bme1390I CCNGG 1 cut(s) 87
BmgT120I GGNCC 2 cut(s) 643, 672
BmiI GGNNCC 1 cut(s) 501
BmrFI CCNGG 1 cut(s) 87
BmsI GCATC 1 cut(s) 142
BplI GAGNNNNNCTC 2 cut(s) 528, 560
Bpu1102I GCTNAGC 1 cut(s) 258
BpuEI CTTGAG 3 cut(s) 398, 489, 539
Bsc4I CCNNNNNNNGG 2 cut(s) 92, 669
Bse1I ACTGG 1 cut(s) 268
BseBI CCWGG 1 cut(s) 87
BseLI CCNNNNNNNGG 2 cut(s) 92, 669
BseMII CTCAG 1 cut(s) 249
BseNI ACTGG 1 cut(s) 268
BseRI GAGGAG 1 cut(s) 492
BseXI GCAGC 3 cut(s) 224, 241, 380
BshFI GGCC 5 cut(s) 375, 445, 644, 662, 674
BslI CCNNNNNNNGG 2 cut(s) 92, 669
BsnI GGCC 5 cut(s) 375, 445, 644, 662, 674
Bsp1286I GDGCHC 1 cut(s) 502
Bsp143I GATC 2 cut(s) 102, 333
Bsp1720I GCTNAGC 1 cut(s) 258
BspANI GGCC 5 cut(s) 375, 445, 644, 662, 674
BspCNI CTCAG 1 cut(s) 250
BspLI GGNNCC 1 cut(s) 501
BsrI ACTGG 1 cut(s) 268
BssMI GATC 2 cut(s) 102, 333
Bst2UI CCWGG 1 cut(s) 87
Bst6I CTCTTC 4 cut(s) 429, 455, 629, 647
BstC8I GCNNGC 3 cut(s) 181, 346, 373
BstDEI CTNAG 4 cut(s) 184, 258, 291, 340
BstH2I RGCGCY 1 cut(s) 512
BstHHI GCGC 1 cut(s) 511
BstKTI GATC 2 cut(s) 105, 336
BstMBI GATC 2 cut(s) 102, 333
BstMWI GCNNNNNNNGC 2 cut(s) 506, 536
BstNI CCWGG 1 cut(s) 87
BstSCI CCNGG 1 cut(s) 85
BstV1I GCAGC 3 cut(s) 224, 241, 380
BsuRI GGCC 5 cut(s) 375, 445, 644, 662, 674
BtsIMutI CAGTG 1 cut(s) 275
Cac8I GCNNGC 3 cut(s) 181, 346, 373
CfoI GCGC 1 cut(s) 511
Cfr13I GGNCC 2 cut(s) 643, 672
CseI GACGC 1 cut(s) 574
CviAII CATG 4 cut(s) 191, 331, 524, 688
DdeI CTNAG 4 cut(s) 184, 258, 291, 340
DpnI GATC 2 cut(s) 104, 335
DpnII GATC 2 cut(s) 102, 333
DraI TTTAAA 1 cut(s) 174
Eam1104I CTCTTC 4 cut(s) 429, 455, 629, 647
EarI CTCTTC 4 cut(s) 429, 455, 629, 647
Eco147I AGGCCT 1 cut(s) 375
Eco24I GRGCYC 1 cut(s) 502
Eco47III AGCGCT 1 cut(s) 510
Eco57I CTGAAG 1 cut(s) 468
EcoRII CCWGG 1 cut(s) 85
EcoT38I GRGCYC 1 cut(s) 502
FaeI CATG 4 cut(s) 194, 334, 527, 691
FatI CATG 4 cut(s) 190, 330, 523, 687
FbaI TGATCA 1 cut(s) 333
Fnu4HI GCNGC 3 cut(s) 213, 255, 369
FriOI GRGCYC 1 cut(s) 502
Fsp4HI GCNGC 3 cut(s) 213, 255, 369
FspBI CTAG 1 cut(s) 359
GlaI GCGC 1 cut(s) 510
GluI GCNGC 3 cut(s) 213, 255, 369
HaeII RGCGCY 1 cut(s) 512
HaeIII GGCC 5 cut(s) 375, 445, 644, 662, 674
HgaI GACGC 1 cut(s) 574
HhaI GCGC 1 cut(s) 511
Hin1II CATG 4 cut(s) 194, 334, 527, 691
Hin6I GCGC 1 cut(s) 509
HinP1I GCGC 1 cut(s) 509
HinfI GANTC 4 cut(s) 71, 82, 287, 684
HphI GGTGA 3 cut(s) 107, 574, 707
Hpy166II GTNNAC 1 cut(s) 6
Hpy188I TCNGA 3 cut(s) 64, 326, 783
Hpy188III TCNNGA 3 cut(s) 106, 387, 518
Hpy8I GTNNAC 1 cut(s) 6
HpyAV CCTTC 3 cut(s) 443, 464, 758
HpyCH4V TGCA 2 cut(s) 155, 368
HpyF10VI GCNNNNNNNGC 2 cut(s) 506, 536
HpyF3I CTNAG 4 cut(s) 184, 258, 291, 340
Hsp92II CATG 4 cut(s) 194, 334, 527, 691
HspAI GCGC 1 cut(s) 509
Ksp22I TGATCA 1 cut(s) 333
Kzo9I GATC 2 cut(s) 102, 333
LmnI GCTCC 4 cut(s) 209, 360, 505, 536
LpnPI CCDG 9 cut(s) 72, 99, 99, 165, 281, 330, 357, 372, 459
Lsp1109I GCAGC 3 cut(s) 224, 241, 380
LweI GCATC 1 cut(s) 142
MaeI CTAG 1 cut(s) 359
MaeIII GTNAC 1 cut(s) 562
MalI GATC 2 cut(s) 104, 335
MboI GATC 2 cut(s) 102, 333
MboII GAAGA 8 cut(s) 206, 230, 424, 446, 472, 646, 664, 773
MhlI GDGCHC 1 cut(s) 502
MluCI AATT 5 cut(s) 53, 158, 301, 363, 513
MnlI CCTC 8 cut(s) 225, 373, 513, 634, 648, 652, 663, 700
MseI TTAA 5 cut(s) 138, 173, 555, 726, 787
MspR9I CCNGG 1 cut(s) 87
MvaI CCWGG 1 cut(s) 87
MwoI GCNNNNNNNGC 2 cut(s) 506, 536
NdeII GATC 2 cut(s) 102, 333
NlaIII CATG 4 cut(s) 194, 334, 527, 691
NlaIV GGNNCC 1 cut(s) 501
NmuCI GTSAC 1 cut(s) 562
PceI AGGCCT 1 cut(s) 375
PfeI GAWTC 4 cut(s) 71, 82, 287, 684
PkrI GCNGC 3 cut(s) 214, 256, 370
PsiI TTATAA 1 cut(s) 488
Psp6I CCWGG 1 cut(s) 85
PspGI CCWGG 1 cut(s) 85
PspN4I GGNNCC 1 cut(s) 501
PspPI GGNCC 2 cut(s) 643, 672
SaqAI TTAA 5 cut(s) 138, 173, 555, 726, 787
SatI GCNGC 3 cut(s) 213, 255, 369
Sau3AI GATC 2 cut(s) 102, 333
Sau96I GGNCC 2 cut(s) 643, 672
ScrFI CCNGG 1 cut(s) 87
SduI GDGCHC 1 cut(s) 502
SetI ASST 8 cut(s) 144, 206, 251, 346, 357, 475, 541, 769
SfaNI GCATC 1 cut(s) 142
SmlI CTYRAG 3 cut(s) 377, 504, 518
SmoI CTYRAG 3 cut(s) 377, 504, 518
Sse9I AATT 5 cut(s) 53, 158, 301, 363, 513
SseBI AGGCCT 1 cut(s) 375
SspMI CTAG 1 cut(s) 359
StuI AGGCCT 1 cut(s) 375
StyD4I CCNGG 1 cut(s) 85
TasI AATT 5 cut(s) 53, 158, 301, 363, 513
TfiI GAWTC 4 cut(s) 71, 82, 287, 684
Tru1I TTAA 5 cut(s) 138, 173, 555, 726, 787
Tru9I TTAA 5 cut(s) 138, 173, 555, 726, 787
TscAI CASTG 1 cut(s) 275
TseFI GTSAC 1 cut(s) 562
TseI GCWGC 3 cut(s) 212, 254, 368
Tsp45I GTSAC 1 cut(s) 562
TspDTI ATGAA 5 cut(s) 207, 388, 540, 603, 762
TspRI CASTG 1 cut(s) 275
XapI RAATTY 1 cut(s) 158
XspI CTAG 1 cut(s) 359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.