RchiOBHm_Chr7g0222781

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
44424903 .. 44425254
352 bp
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UTR
Exon/CDS
Intron
PRQ19943

Sequence Viewer

Length: 249 bp
ATGAACGCTGTTTTGCTTGCTGAAGATCTAAAGGTCGCATGGAGGGTTAAGGTGAATGAAAAGGGCATAGTGCAGTGTGAGGAGATTTCCAAGTATGCAAAGGGACTAATTGAAGGAGACGAAAGGAGAGTGCTCAAAAAGAACATGATGGAAATGAAAGAGGCATCTCAACTGGCTTTGAGCCAAGATGGGTCGTCTACAAAATCACTCTCAGAGGTAGCCAATATATGGAAGGAACACAAGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

82

Amino Acids

9.28

Weight (kDa)

7.84

Isoelectric Point (pI)

42.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030472)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0222781
rosa_samantha Rh7BG151000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 228
AccI GTMKAC 1 cut(s) 197
AcuI CTGAAG 1 cut(s) 42
AfiI CCNNNNNNNGG 1 cut(s) 228
AgsI TTSAA 1 cut(s) 113
Alw21I GWGCWC 1 cut(s) 135
Alw26I GTCTC 1 cut(s) 111
AsuHPI GGTGA 1 cut(s) 64
Bbv12I GWGCWC 1 cut(s) 135
BccI CCATC 2 cut(s) 142, 182
BcoDI GTCTC 1 cut(s) 111
BglII AGATCT 1 cut(s) 25
BmsI GCATC 1 cut(s) 173
Bsc4I CCNNNNNNNGG 1 cut(s) 228
Bse1I ACTGG 1 cut(s) 177
BseLI CCNNNNNNNGG 1 cut(s) 228
BseMII CTCAG 1 cut(s) 225
BseNI ACTGG 1 cut(s) 177
BseRI GAGGAG 1 cut(s) 95
BsgI GTGCAG 1 cut(s) 92
BsiHKAI GWGCWC 1 cut(s) 135
BslFI GGGAC 1 cut(s) 117
BslI CCNNNNNNNGG 1 cut(s) 228
BsmAI GTCTC 1 cut(s) 111
BsmBI CGTCTC 1 cut(s) 111
BsmFI GGGAC 1 cut(s) 117
Bsp1286I GDGCHC 1 cut(s) 135
Bsp143I GATC 1 cut(s) 25
BspCNI CTCAG 1 cut(s) 224
BsrI ACTGG 1 cut(s) 177
BssMI GATC 1 cut(s) 25
BstC8I GCNNGC 1 cut(s) 18
BstDEI CTNAG 1 cut(s) 211
BstKTI GATC 1 cut(s) 28
BstMAI GTCTC 1 cut(s) 111
BstMBI GATC 1 cut(s) 25
BstX2I RGATCY 1 cut(s) 25
BstYI RGATCY 1 cut(s) 25
BtsI GCAGTG 1 cut(s) 80
BtsIMutI CAGTG 1 cut(s) 80
Cac8I GCNNGC 1 cut(s) 18
CviAII CATG 2 cut(s) 39, 145
CviJI RGCY 3 cut(s) 176, 183, 221
CviKI_1 RGCY 3 cut(s) 176, 183, 221
DdeI CTNAG 1 cut(s) 211
DpnI GATC 1 cut(s) 27
DpnII GATC 1 cut(s) 25
Eco57I CTGAAG 1 cut(s) 42
Esp3I CGTCTC 1 cut(s) 111
FaeI CATG 2 cut(s) 42, 148
FaiI YATR 6 cut(s) 40, 68, 96, 146, 227, 229
FaqI GGGAC 1 cut(s) 117
FatI CATG 2 cut(s) 38, 144
FblI GTMKAC 1 cut(s) 197
Hin1II CATG 2 cut(s) 42, 148
HphI GGTGA 1 cut(s) 64
Hpy166II GTNNAC 1 cut(s) 198
Hpy188I TCNGA 1 cut(s) 214
Hpy8I GTNNAC 1 cut(s) 198
HpyAV CCTTC 2 cut(s) 107, 226
HpyCH4V TGCA 2 cut(s) 73, 98
HpyF3I CTNAG 1 cut(s) 211
Hsp92II CATG 2 cut(s) 42, 148
Kzo9I GATC 1 cut(s) 25
LpnPI CCDG 1 cut(s) 158
LweI GCATC 1 cut(s) 173
MalI GATC 1 cut(s) 27
MboI GATC 1 cut(s) 25
MboII GAAGA 1 cut(s) 35
MflI RGATCY 1 cut(s) 25
MhlI GDGCHC 1 cut(s) 135
MluCI AATT 1 cut(s) 108
MnlI CCTC 4 cut(s) 36, 73, 154, 208
MseI TTAA 1 cut(s) 48
NdeII GATC 1 cut(s) 25
NlaIII CATG 2 cut(s) 42, 148
PflMI CCANNNNNTGG 1 cut(s) 228
PsuI RGATCY 1 cut(s) 25
SaqAI TTAA 1 cut(s) 48
Sau3AI GATC 1 cut(s) 25
SduI GDGCHC 1 cut(s) 135
SetI ASST 3 cut(s) 36, 54, 219
SfaNI GCATC 1 cut(s) 173
SgeI CNNG 6 cut(s) 29, 51, 103, 157, 185, 197
Sse9I AATT 1 cut(s) 108
TasI AATT 1 cut(s) 108
Tru1I TTAA 1 cut(s) 48
Tru9I TTAA 1 cut(s) 48
TscAI CASTG 1 cut(s) 80
TspDTI ATGAA 3 cut(s) 17, 72, 170
TspRI CASTG 1 cut(s) 80
Van91I CCANNNNNTGG 1 cut(s) 228
XmiI GTMKAC 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.