Dehydrogenase reductase SDR family member on chromosome
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0229511 RchiOBHm_Chr7g0229671 RchiOBHm_Chr7g0230161 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 138 |
| AgsI | TTSAA | 4 cut(s) | 32, 82, 298, 446 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 389 |
| AluBI | AGCT | 5 cut(s) | 132, 210, 289, 370, 406 |
| AluI | AGCT | 5 cut(s) | 132, 210, 289, 370, 406 |
| Alw26I | GTCTC | 1 cut(s) | 85 |
| AoxI | GGCC | 1 cut(s) | 196 |
| ApeKI | GCWGC | 2 cut(s) | 367, 437 |
| AseI | ATTAAT | 1 cut(s) | 356 |
| AspS9I | GGNCC | 2 cut(s) | 196, 341 |
| AsuHPI | GGTGA | 1 cut(s) | 150 |
| AvaII | GGWCC | 1 cut(s) | 341 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 300, 333 |
| BbvI | GCAGC | 2 cut(s) | 379, 424 |
| BcoDI | GTCTC | 1 cut(s) | 85 |
| BisI | GCNGC | 2 cut(s) | 368, 438 |
| BlsI | GCNGC | 2 cut(s) | 369, 439 |
| Bme18I | GGWCC | 1 cut(s) | 341 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 389 |
| BmgT120I | GGNCC | 2 cut(s) | 196, 341 |
| BmiI | GGNNCC | 1 cut(s) | 343 |
| BmrI | ACTGGG | 1 cut(s) | 339 |
| BmsI | GCATC | 2 cut(s) | 155, 220 |
| BmuI | ACTGGG | 1 cut(s) | 339 |
| BpmI | CTGGAG | 1 cut(s) | 192 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 356, 386 |
| Bse1I | ACTGG | 2 cut(s) | 69, 345 |
| BseNI | ACTGG | 2 cut(s) | 69, 345 |
| BseXI | GCAGC | 2 cut(s) | 379, 424 |
| BshFI | GGCC | 1 cut(s) | 198 |
| BsmAI | GTCTC | 1 cut(s) | 85 |
| BsmI | GAATGC | 1 cut(s) | 439 |
| BsnI | GGCC | 1 cut(s) | 198 |
| Bsp143I | GATC | 1 cut(s) | 268 |
| BspANI | GGCC | 1 cut(s) | 198 |
| BspLI | GGNNCC | 1 cut(s) | 343 |
| BspQI | GCTCTTC | 1 cut(s) | 217 |
| BsrI | ACTGG | 2 cut(s) | 69, 345 |
| BssMI | GATC | 1 cut(s) | 268 |
| Bst4CI | ACNGT | 2 cut(s) | 8, 337 |
| Bst6I | CTCTTC | 1 cut(s) | 217 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 152 |
| BstC8I | GCNNGC | 1 cut(s) | 291 |
| BstDEI | CTNAG | 1 cut(s) | 277 |
| BstKTI | GATC | 1 cut(s) | 271 |
| BstMAI | GTCTC | 1 cut(s) | 85 |
| BstMBI | GATC | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 152, 239 |
| BstV1I | GCAGC | 2 cut(s) | 379, 424 |
| BsuRI | GGCC | 1 cut(s) | 198 |
| BtsIMutI | CAGTG | 1 cut(s) | 4 |
| Cac8I | GCNNGC | 1 cut(s) | 291 |
| Cfr13I | GGNCC | 2 cut(s) | 196, 341 |
| CseI | GACGC | 1 cut(s) | 152 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 434 |
| CviAII | CATG | 3 cut(s) | 44, 61, 389 |
| CviJI | RGCY | 8 cut(s) | 77, 132, 198, 210, 289, 370, 406, 457 |
| CviKI_1 | RGCY | 8 cut(s) | 77, 132, 198, 210, 289, 370, 406, 457 |
| DdeI | CTNAG | 1 cut(s) | 277 |
| DpnI | GATC | 1 cut(s) | 270 |
| DpnII | GATC | 1 cut(s) | 268 |
| DriI | GACNNNNNGTC | 1 cut(s) | 389 |
| Eam1104I | CTCTTC | 1 cut(s) | 217 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 389 |
| EarI | CTCTTC | 1 cut(s) | 217 |
| Eco47I | GGWCC | 1 cut(s) | 341 |
| Eco57I | CTGAAG | 1 cut(s) | 138 |
| FaeI | CATG | 3 cut(s) | 47, 64, 392 |
| FatI | CATG | 3 cut(s) | 43, 60, 388 |
| FauNDI | CATATG | 1 cut(s) | 226 |
| Fnu4HI | GCNGC | 2 cut(s) | 368, 438 |
| Fsp4HI | GCNGC | 2 cut(s) | 368, 438 |
| GluI | GCNGC | 2 cut(s) | 368, 438 |
| GsuI | CTGGAG | 1 cut(s) | 192 |
| HaeIII | GGCC | 1 cut(s) | 198 |
| HgaI | GACGC | 1 cut(s) | 152 |
| Hin1II | CATG | 3 cut(s) | 47, 64, 392 |
| HincII | GTYRAC | 1 cut(s) | 114 |
| HindII | GTYRAC | 1 cut(s) | 114 |
| HindIII | AAGCTT | 1 cut(s) | 404 |
| HinfI | GANTC | 2 cut(s) | 17, 281 |
| HphI | GGTGA | 1 cut(s) | 150 |
| Hpy166II | GTNNAC | 3 cut(s) | 114, 178, 350 |
| Hpy188I | TCNGA | 2 cut(s) | 268, 420 |
| Hpy188III | TCNNGA | 2 cut(s) | 140, 171 |
| Hpy8I | GTNNAC | 3 cut(s) | 114, 178, 350 |
| HpyAV | CCTTC | 1 cut(s) | 75 |
| HpyCH4III | ACNGT | 2 cut(s) | 8, 337 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 109, 242, 331 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 152, 239 |
| HpyF3I | CTNAG | 1 cut(s) | 277 |
| Hsp92II | CATG | 3 cut(s) | 47, 64, 392 |
| Kzo9I | GATC | 1 cut(s) | 268 |
| LguI | GCTCTTC | 1 cut(s) | 217 |
| LmnI | GCTCC | 2 cut(s) | 137, 364 |
| LpnPI | CCDG | 6 cut(s) | 6, 82, 156, 174, 212, 358 |
| Lsp1109I | GCAGC | 2 cut(s) | 379, 424 |
| LweI | GCATC | 2 cut(s) | 155, 220 |
| MaeIII | GTNAC | 1 cut(s) | 282 |
| MalI | GATC | 1 cut(s) | 270 |
| MboI | GATC | 1 cut(s) | 268 |
| MboII | GAAGA | 1 cut(s) | 204 |
| MluCI | AATT | 2 cut(s) | 126, 322 |
| MlyI | GAGTC | 1 cut(s) | 290 |
| MmeI | TCCRAC | 2 cut(s) | 103, 319 |
| MnlI | CCTC | 4 cut(s) | 67, 113, 316, 414 |
| MseI | TTAA | 1 cut(s) | 356 |
| MspA1I | CMGCKG | 1 cut(s) | 370 |
| Mva1269I | GAATGC | 1 cut(s) | 439 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 152, 239 |
| NdeI | CATATG | 1 cut(s) | 226 |
| NdeII | GATC | 1 cut(s) | 268 |
| NlaIII | CATG | 3 cut(s) | 47, 64, 392 |
| NlaIV | GGNNCC | 1 cut(s) | 343 |
| NmuCI | GTSAC | 1 cut(s) | 282 |
| PciSI | GCTCTTC | 1 cut(s) | 217 |
| PctI | GAATGC | 1 cut(s) | 439 |
| PfeI | GAWTC | 1 cut(s) | 17 |
| PflFI | GACNNNGTC | 1 cut(s) | 345 |
| PkrI | GCNGC | 2 cut(s) | 369, 439 |
| PleI | GAGTC | 1 cut(s) | 289 |
| PpsI | GAGTC | 1 cut(s) | 289 |
| PshBI | ATTAAT | 1 cut(s) | 356 |
| PspN4I | GGNNCC | 1 cut(s) | 343 |
| PspPI | GGNCC | 2 cut(s) | 196, 341 |
| PsyI | GACNNNGTC | 1 cut(s) | 345 |
| PvuII | CAGCTG | 1 cut(s) | 370 |
| SapI | GCTCTTC | 1 cut(s) | 217 |
| SaqAI | TTAA | 1 cut(s) | 356 |
| SatI | GCNGC | 2 cut(s) | 368, 438 |
| Sau3AI | GATC | 1 cut(s) | 268 |
| Sau96I | GGNCC | 2 cut(s) | 196, 341 |
| SchI | GAGTC | 1 cut(s) | 290 |
| SetI | ASST | 7 cut(s) | 134, 212, 291, 308, 372, 408, 425 |
| SfaNI | GCATC | 2 cut(s) | 155, 220 |
| SinI | GGWCC | 1 cut(s) | 341 |
| Sse9I | AATT | 2 cut(s) | 126, 322 |
| TaaI | ACNGT | 2 cut(s) | 8, 337 |
| TasI | AATT | 2 cut(s) | 126, 322 |
| TfiI | GAWTC | 1 cut(s) | 17 |
| Tru1I | TTAA | 1 cut(s) | 356 |
| Tru9I | TTAA | 1 cut(s) | 356 |
| TseFI | GTSAC | 1 cut(s) | 282 |
| TseI | GCWGC | 2 cut(s) | 367, 437 |
| Tsp45I | GTSAC | 1 cut(s) | 282 |
| TspDTI | ATGAA | 1 cut(s) | 213 |
| Tth111I | GACNNNGTC | 1 cut(s) | 345 |
| VpaK11BI | GGWCC | 1 cut(s) | 341 |
| VspI | ATTAAT | 1 cut(s) | 356 |