RchiOBHm_Chr7g0234761

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
59495809 .. 59497174
1366 bp
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UTR
Exon/CDS
Intron
PRQ21038

Sequence Viewer

Length: 144 bp
ATGATTTGGAAAGCAGAGAGGAAACTAATGGGTCGACCTTACAAGTACTTTCAGAACAAAACTCAGAAGCATCTGCAATGGAGGATATGTGTGCACATCCTGGGTCATTTGGAGAACTGTGTTTTCTTTGTGGCCAGAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

47

Amino Acids

5.78

Weight (kDa)

10.15

Isoelectric Point (pI)

30.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030513)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0234691 RchiOBHm_Chr7g0234761

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 34
AcoI YGGCCR 1 cut(s) 132
AfaI GTAC 1 cut(s) 47
AjnI CCWGG 1 cut(s) 99
Alw21I GWGCWC 1 cut(s) 96
Alw44I GTGCAC 1 cut(s) 92
AoxI GGCC 1 cut(s) 132
ApaLI GTGCAC 1 cut(s) 92
BaeGI GKGCMC 1 cut(s) 96
BalI TGGCCA 1 cut(s) 134
Bbv12I GWGCWC 1 cut(s) 96
BciT130I CCWGG 1 cut(s) 101
BmcAI AGTACT 1 cut(s) 47
Bme1390I CCNGG 1 cut(s) 101
BmrFI CCNGG 1 cut(s) 101
BmsI GCATC 1 cut(s) 79
BsaJI CCNNGG 1 cut(s) 100
BsaXI ACNNNNNCTCC 2 cut(s) 73, 103
Bse3DI GCAATG 1 cut(s) 83
BseBI CCWGG 1 cut(s) 101
BseDI CCNNGG 1 cut(s) 100
BseGI GGATG 1 cut(s) 96
BseMI GCAATG 1 cut(s) 83
BseMII CTCAG 1 cut(s) 77
BseSI GKGCMC 1 cut(s) 96
BshFI GGCC 1 cut(s) 134
BsiHKAI GWGCWC 1 cut(s) 96
BsnI GGCC 1 cut(s) 134
Bsp1286I GDGCHC 1 cut(s) 96
BspANI GGCC 1 cut(s) 134
BspCNI CTCAG 1 cut(s) 76
BsrDI GCAATG 1 cut(s) 83
BssECI CCNNGG 1 cut(s) 100
Bst2UI CCWGG 1 cut(s) 101
Bst4CI ACNGT 1 cut(s) 119
BstDEI CTNAG 1 cut(s) 63
BstF5I GGATG 1 cut(s) 96
BstNI CCWGG 1 cut(s) 101
BstSCI CCNGG 1 cut(s) 99
BstSLI GKGCMC 1 cut(s) 96
BsuRI GGCC 1 cut(s) 134
BtsCI GGATG 1 cut(s) 96
Csp6I GTAC 1 cut(s) 46
CviJI RGCY 1 cut(s) 134
CviKI_1 RGCY 1 cut(s) 134
CviQI GTAC 1 cut(s) 46
DdeI CTNAG 1 cut(s) 63
EaeI YGGCCR 1 cut(s) 132
EcoRII CCWGG 1 cut(s) 99
FaiI YATR 1 cut(s) 88
FblI GTMKAC 1 cut(s) 34
FokI GGATG 1 cut(s) 83
HaeIII GGCC 1 cut(s) 134
HincII GTYRAC 1 cut(s) 35
HindII GTYRAC 1 cut(s) 35
Hpy166II GTNNAC 2 cut(s) 35, 94
Hpy188I TCNGA 2 cut(s) 54, 66
Hpy8I GTNNAC 2 cut(s) 35, 94
HpyCH4III ACNGT 1 cut(s) 119
HpyCH4V TGCA 2 cut(s) 76, 94
HpyF3I CTNAG 1 cut(s) 63
LpnPI CCDG 2 cut(s) 86, 113
LweI GCATC 1 cut(s) 79
MhlI GDGCHC 1 cut(s) 96
MlsI TGGCCA 1 cut(s) 134
MluNI TGGCCA 1 cut(s) 134
MnlI CCTC 3 cut(s) 12, 75, 131
Mox20I TGGCCA 1 cut(s) 134
MscI TGGCCA 1 cut(s) 134
Msp20I TGGCCA 1 cut(s) 134
MspR9I CCNGG 1 cut(s) 101
MvaI CCWGG 1 cut(s) 101
Psp6I CCWGG 1 cut(s) 99
PspGI CCWGG 1 cut(s) 99
RsaI GTAC 1 cut(s) 47
RsaNI GTAC 1 cut(s) 46
SalI GTCGAC 1 cut(s) 33
ScaI AGTACT 1 cut(s) 47
ScrFI CCNGG 1 cut(s) 101
SduI GDGCHC 1 cut(s) 96
SetI ASST 2 cut(s) 40, 142
SfaNI GCATC 1 cut(s) 79
SgeI CNNG 3 cut(s) 55, 112, 113
StyD4I CCNGG 1 cut(s) 99
TaaI ACNGT 1 cut(s) 119
TaqI TCGA 1 cut(s) 34
TatI WGTACW 1 cut(s) 45
VneI GTGCAC 1 cut(s) 92
XmiI GTMKAC 1 cut(s) 34
ZrmI AGTACT 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.