RLG00000006391

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
6712927 .. 6714592
1666 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006391

Sequence Viewer

Length: 1578 bp
ATGGATTCCGACCCTTTCCCTTTCTTCATACCCACGATGGTTCAGTCCTCCATTTCTGGCTTGGAGGCATTCGCTTGTGCTCTGTTTTTCATCTCCGTCTTTGCTCTCTGGCTCAGACCTGGCGGCCTCGCCTGGGCTCTCTGCAAGGTCCGAGCTTGTAACCCTATTCCCGGCCCACCCGGATACCCTCTCATTGGTTCACTGACCATCTTCACCGGGTCTACACCTCACAGAGTTCTGGCCAAGCTCGCCAGAAGCTTGAAGGCGGAGCCTTTGCTGTCTCTCTCGGTCGGTCTGACCCGGTTTGTGATCTCAAGCAACCCGGAGACAGCTAAAGAGCTCCTCAACAGTTCAGCTTTTGCTAATAGGCCCAGAAATGAAACGGCCTACGAGCTTCTGTTTAACAGAGCAATGGGGTTTGCACCCTACGGTGAGTACTGGAGGAATCTGAGGAGAATCGCAGCGACCCATTTGTTCAGTCCGAAGACAATAGCTGGTTCTGAAGGGTTTAGGGTTGAAATGGGGATGAAGATGGTGGAGGAGATTCGGGGTTTGAAGGTTGAAAATGGAGAAGTTCAGGTTAAGAAGGTGCTTCATTTTGGGTCTCTGAACAATGTGATGAAGACGGTGTTTGGGAAATGCTATGAGTTTGGGGCGGAAGGAGGTGAGGGGCTTGAGCTTGAAGGGTTGGTGAGGGAAGGGTATGAGTTGCTTGGAATTTTCAACTGGAATAACCATTTTCCGTTTCTGGGGTGGTTGGATTTTCAGGGTGTGAGGAAGAGGGCTAGGGGTTTGGTTATGAAGGTGGAAGCTTTTGTGGGTAAGATCATTGAGGAACATAGAGTTAAGAGGGTTAGAGGTGATAAGTTTGACGAAGTTTGCACTGGGGATTTTGTTGATGTTCTTCTTGATTTGGAGAGAGATCAGAAGCTCAGTGATTCTGACATGGTTGCTGTTCTTTGGGAAATGATCTTCAGAGGAACTGACACAGTGGCTATTCTGTTAGAGTGGATTCTTGCAAGGATGGTTTTGCACCCTGAAATCCAATCCAAAGCGCAAAGAGAAATAGACTCTGTTGTTGGCTCATCCAGGCCTGTTTCGGGTTCTGACATCCCCAACCTGCCTTACCTCCAAGCCATTGTCAAGGAGTCTTTCAGGGTTCACCCACCTGGTCCTCTCCTCTCATGGGCTCGCATTGCTATCCATGATGTCTATGTGGGGCAGAGCTTCGTCCCAGCTGGGACTACAGCCATGGTGAACATGTGGGCAATCACTCACGATGAGAATGTCTGGTCTGAGCCGGAGAAGTTCAAGCCGGAGCGCTTCATGGATCAGTCGTCTGAGGATGTGAACATCATGGGGTATGATCTGAGGTTGGCGCCTTTCGGCTCTGGAAGGAGGGTTTGCCCTGGAAAAGCTTTGGGTTTGGCCACTGTTCAGCTGTGGCTGGCTCAGTTGCTTCAGAGCTTCAACTGGGTTGAGTCTGATAATGCTCGTGTGGACTTGGATGAGTGTTTGAAGCTGTCTATGGAGATGAAGAGCCCATTGGTTTGCAAAGCTGTTGCTAGGGTTGCTTGA

Protein Analysis

526

Amino Acids

58.65

Weight (kDa)

6.55

Isoelectric Point (pI)

38.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 57 - 508 6.4e-87 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013981)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1128
AccB1I GGYRCC 1 cut(s) 1378
AccI GTMKAC 1 cut(s) 221
AciI CCGC 3 cut(s) 123, 266, 656
AclWI GGATC 1 cut(s) 1338
AcoI YGGCCR 2 cut(s) 240, 1428
AcsI RAATTY 1 cut(s) 717
AcuI CTGAAG 3 cut(s) 522, 958, 1445
AcyI GRCGYC 1 cut(s) 1379
AfaI GTAC 1 cut(s) 437
AfeI AGCGCT 1 cut(s) 1322
AfiI CCNNNNNNNGG 6 cut(s) 133, 170, 194, 749, 1100, 1186
AflIII ACRYGT 1 cut(s) 1260
AgsI TTSAA 9 cut(s) 262, 518, 556, 563, 683, 724, 1312, 1471, 1519
AjnI CCWGG 5 cut(s) 118, 131, 1088, 1168, 1408
AjuI GAANNNNNNNTTGG 2 cut(s) 1529, 1561
Alw21I GWGCWC 2 cut(s) 82, 342
Alw26I GTCTC 3 cut(s) 285, 320, 609
AlwI GGATC 1 cut(s) 1338
Aor51HI AGCGCT 1 cut(s) 1322
AoxI GGCC 7 cut(s) 124, 172, 240, 368, 384, 1091, 1428
ApeKI GCWGC 1 cut(s) 461
ApoI RAATTY 1 cut(s) 717
AspLEI GCGC 3 cut(s) 1057, 1323, 1381
AspS9I GGNCC 4 cut(s) 148, 173, 369, 1172
AsuC2I CCSGG 5 cut(s) 171, 180, 217, 301, 323
AsuHPI GGTGA 7 cut(s) 205, 443, 677, 703, 872, 1154, 1267
AvaII GGWCC 2 cut(s) 148, 1172
BalI TGGCCA 2 cut(s) 242, 1430
BanI GGYRCC 1 cut(s) 1378
BanII GRGCYC 4 cut(s) 139, 342, 1192, 1544
BauI CACGAG 1 cut(s) 1494
BbsI GAAGAC 2 cut(s) 491, 629
Bbv12I GWGCWC 2 cut(s) 82, 342
BbvI GCAGC 1 cut(s) 473
BccI CCATC 4 cut(s) 31, 215, 526, 1018
BceAI ACGGC 1 cut(s) 399
BciT130I CCWGG 5 cut(s) 120, 133, 1090, 1170, 1410
BciVI GTATCC 1 cut(s) 176
BcnI CCSGG 5 cut(s) 171, 180, 217, 301, 323
BcoDI GTCTC 3 cut(s) 285, 320, 609
BfaI CTAG 2 cut(s) 786, 1566
BfmI CTRYAG 1 cut(s) 1245
BfoI RGCGCY 2 cut(s) 1324, 1382
BfuAI ACCTGC 1 cut(s) 1128
BfuI GTATCC 1 cut(s) 176
BisI GCNGC 2 cut(s) 124, 462
BlsI GCNGC 2 cut(s) 125, 463
BmcAI AGTACT 1 cut(s) 437
Bme18I GGWCC 2 cut(s) 148, 1172
BmgT120I GGNCC 4 cut(s) 148, 173, 369, 1172
BmiI GGNNCC 2 cut(s) 270, 1380
BmrI ACTGGG 2 cut(s) 894, 1483
BmuI ACTGGG 2 cut(s) 894, 1483
BpiI GAAGAC 2 cut(s) 491, 629
BpmI CTGGAG 1 cut(s) 460
BpuEI CTTGAG 2 cut(s) 298, 695
BpuMI CCSGG 5 cut(s) 171, 180, 217, 301, 323
BsaHI GRCGYC 1 cut(s) 1379
BsaI GGTCTC 1 cut(s) 609
BsaJI CCNNGG 3 cut(s) 132, 1251, 1408
Bsc4I CCNNNNNNNGG 6 cut(s) 133, 170, 194, 749, 1100, 1186
Bse1I ACTGG 4 cut(s) 443, 731, 889, 1478
Bse3DI GCAATG 2 cut(s) 417, 1194
BseBI CCWGG 5 cut(s) 120, 133, 1090, 1170, 1410
BseDI CCNNGG 3 cut(s) 132, 1251, 1408
BseGI GGATG 6 cut(s) 531, 1029, 1085, 1110, 1351, 1513
BseLI CCNNNNNNNGG 6 cut(s) 133, 170, 194, 749, 1100, 1186
BseMI GCAATG 2 cut(s) 417, 1194
BseMII CTCAG 7 cut(s) 127, 440, 946, 1287, 1332, 1361, 1466
BseNI ACTGG 4 cut(s) 443, 731, 889, 1478
BseRI GAGGAG 4 cut(s) 332, 466, 554, 1169
BseXI GCAGC 1 cut(s) 473
BseYI CCCAGC 2 cut(s) 1234, 1238
Bsh1285I CGRYCG 1 cut(s) 291
BshFI GGCC 7 cut(s) 126, 174, 242, 370, 386, 1093, 1430
BshNI GGYRCC 1 cut(s) 1378
BsiEI CGRYCG 1 cut(s) 291
BsiHKAI GWGCWC 2 cut(s) 82, 342
BsiSI CCGG 7 cut(s) 171, 180, 216, 301, 323, 1301, 1316
BslFI GGGAC 2 cut(s) 1217, 1255
BslI CCNNNNNNNGG 6 cut(s) 133, 170, 194, 749, 1100, 1186
BsmAI GTCTC 3 cut(s) 285, 320, 609
BsmFI GGGAC 2 cut(s) 1217, 1255
BsmI GAATGC 1 cut(s) 68
BsnI GGCC 7 cut(s) 126, 174, 242, 370, 386, 1093, 1430
Bso31I GGTCTC 1 cut(s) 609
Bsp1286I GDGCHC 5 cut(s) 82, 139, 342, 1192, 1544
Bsp143I GATC 6 cut(s) 309, 825, 922, 969, 1330, 1366
Bsp19I CCATGG 1 cut(s) 1251
BspACI CCGC 3 cut(s) 123, 266, 656
BspANI GGCC 7 cut(s) 126, 174, 242, 370, 386, 1093, 1430
BspCNI CTCAG 7 cut(s) 126, 441, 945, 1288, 1333, 1362, 1465
BspLI GGNNCC 2 cut(s) 270, 1380
BspMI ACCTGC 1 cut(s) 1128
BspPI GGATC 1 cut(s) 1338
BspQI GCTCTTC 1 cut(s) 1532
BspT107I GGYRCC 1 cut(s) 1378
BspTNI GGTCTC 1 cut(s) 609
BsrDI GCAATG 2 cut(s) 417, 1194
BsrI ACTGG 4 cut(s) 443, 731, 889, 1478
BssECI CCNNGG 3 cut(s) 132, 1251, 1408
BssMI GATC 6 cut(s) 309, 825, 922, 969, 1330, 1366
BssNI GRCGYC 1 cut(s) 1379
BssSI CACGAG 1 cut(s) 1494
BssT1I CCWWGG 1 cut(s) 1251
Bst2BI CACGAG 1 cut(s) 1494
Bst2UI CCWGG 5 cut(s) 120, 133, 1090, 1170, 1410
Bst4CI ACNGT 5 cut(s) 350, 431, 628, 991, 1435
Bst6I CTCTTC 2 cut(s) 773, 1532
BstACI GRCGYC 1 cut(s) 1379
BstC8I GCNNGC 3 cut(s) 249, 1192, 1449
BstDEI CTNAG 7 cut(s) 113, 449, 932, 1296, 1341, 1370, 1452
BstDSI CCRYGG 1 cut(s) 1251
BstF5I GGATG 6 cut(s) 531, 1029, 1085, 1110, 1351, 1513
BstH2I RGCGCY 2 cut(s) 1324, 1382
BstHHI GCGC 3 cut(s) 1057, 1323, 1381
BstKTI GATC 6 cut(s) 312, 828, 925, 972, 1333, 1369
BstMAI GTCTC 3 cut(s) 285, 320, 609
BstMBI GATC 6 cut(s) 309, 825, 922, 969, 1330, 1366
BstMCI CGRYCG 1 cut(s) 291
BstMWI GCNNNNNNNGC 3 cut(s) 248, 1196, 1571
BstNI CCWGG 5 cut(s) 120, 133, 1090, 1170, 1410
BstNSI RCATGY 1 cut(s) 1264
BstSFI CTRYAG 1 cut(s) 1245
BstV1I GCAGC 1 cut(s) 473
BstV2I GAAGAC 2 cut(s) 491, 629
BsuI GTATCC 1 cut(s) 176
BsuRI GGCC 7 cut(s) 126, 174, 242, 370, 386, 1093, 1430
BtgI CCRYGG 1 cut(s) 1251
BtsCI GGATG 6 cut(s) 531, 1029, 1085, 1110, 1351, 1513
BtsIMutI CAGTG 5 cut(s) 200, 882, 940, 996, 1431
BveI ACCTGC 1 cut(s) 1128
Cac8I GCNNGC 3 cut(s) 249, 1192, 1449
CfoI GCGC 3 cut(s) 1057, 1323, 1381
Cfr13I GGNCC 4 cut(s) 148, 173, 369, 1172
CsiI ACCWGGT 1 cut(s) 1168
Csp6I GTAC 1 cut(s) 436
CviAII CATG 7 cut(s) 946, 1185, 1205, 1252, 1261, 1327, 1357
CviQI GTAC 1 cut(s) 436
DdeI CTNAG 7 cut(s) 113, 449, 932, 1296, 1341, 1370, 1452
DinI GGCGCC 1 cut(s) 1380
DpnI GATC 6 cut(s) 311, 827, 924, 971, 1332, 1368
DpnII GATC 6 cut(s) 309, 825, 922, 969, 1330, 1366
EaeI YGGCCR 2 cut(s) 240, 1428
Eam1104I CTCTTC 2 cut(s) 773, 1532
EarI CTCTTC 2 cut(s) 773, 1532
EciI GGCGGA 2 cut(s) 281, 671
Ecl136II GAGCTC 1 cut(s) 340
Eco130I CCWWGG 1 cut(s) 1251
Eco147I AGGCCT 1 cut(s) 1093
Eco24I GRGCYC 4 cut(s) 139, 342, 1192, 1544
Eco31I GGTCTC 1 cut(s) 609
Eco47I GGWCC 2 cut(s) 148, 1172
Eco47III AGCGCT 1 cut(s) 1322
Eco53kI GAGCTC 1 cut(s) 340
Eco57I CTGAAG 3 cut(s) 522, 958, 1445
EcoICRI GAGCTC 1 cut(s) 340
EcoRII CCWGG 5 cut(s) 118, 131, 1088, 1168, 1408
EcoT14I CCWWGG 1 cut(s) 1251
EcoT38I GRGCYC 4 cut(s) 139, 342, 1192, 1544
EgeI GGCGCC 1 cut(s) 1380
EheI GGCGCC 1 cut(s) 1380
ErhI CCWWGG 1 cut(s) 1251
FaeI CATG 7 cut(s) 949, 1188, 1208, 1255, 1264, 1330, 1360
FaqI GGGAC 2 cut(s) 1217, 1255
FatI CATG 7 cut(s) 945, 1184, 1204, 1251, 1260, 1326, 1356
FblI GTMKAC 1 cut(s) 221
Fnu4HI GCNGC 2 cut(s) 124, 462
FokI GGATG 6 cut(s) 538, 1036, 1072, 1097, 1358, 1520
FriOI GRGCYC 4 cut(s) 139, 342, 1192, 1544
Fsp4HI GCNGC 2 cut(s) 124, 462
FspBI CTAG 2 cut(s) 786, 1566
GlaI GCGC 3 cut(s) 1056, 1322, 1380
GluI GCNGC 2 cut(s) 124, 462
GsaI CCCAGC 2 cut(s) 1238, 1242
GsuI CTGGAG 1 cut(s) 460
HaeII RGCGCY 2 cut(s) 1324, 1382
HaeIII GGCC 7 cut(s) 126, 174, 242, 370, 386, 1093, 1430
HapII CCGG 7 cut(s) 171, 180, 216, 301, 323, 1301, 1316
HhaI GCGC 3 cut(s) 1057, 1323, 1381
Hin1I GRCGYC 1 cut(s) 1379
Hin1II CATG 7 cut(s) 949, 1188, 1208, 1255, 1264, 1330, 1360
Hin6I GCGC 3 cut(s) 1055, 1321, 1379
HinP1I GCGC 3 cut(s) 1055, 1321, 1379
HindIII AAGCTT 3 cut(s) 256, 810, 1416
HinfI GANTC 9 cut(s) 5, 445, 456, 544, 938, 1012, 1070, 1148, 1481
HpaII CCGG 7 cut(s) 171, 180, 216, 301, 323, 1301, 1316
HphI GGTGA 7 cut(s) 205, 443, 677, 703, 872, 1154, 1267
Hpy166II GTNNAC 6 cut(s) 200, 222, 1162, 1258, 1351, 1501
Hpy188III TCNNGA 3 cut(s) 908, 1277, 1392
Hpy8I GTNNAC 6 cut(s) 200, 222, 1162, 1258, 1351, 1501
HpyAV CCTTC 9 cut(s) 256, 497, 550, 580, 653, 677, 692, 796, 1389
HpyCH4III ACNGT 5 cut(s) 350, 431, 628, 991, 1435
HpyCH4V TGCA 6 cut(s) 144, 422, 882, 1019, 1033, 1554
HpyF10VI GCNNNNNNNGC 3 cut(s) 248, 1196, 1571
HpyF3I CTNAG 7 cut(s) 113, 449, 932, 1296, 1341, 1370, 1452
Hsp92I GRCGYC 1 cut(s) 1379
Hsp92II CATG 7 cut(s) 949, 1188, 1208, 1255, 1264, 1330, 1360
HspAI GCGC 3 cut(s) 1055, 1321, 1379
KasI GGCGCC 1 cut(s) 1378
Kzo9I GATC 6 cut(s) 309, 825, 922, 969, 1330, 1366
LguI GCTCTTC 1 cut(s) 1532
LmnI GCTCC 3 cut(s) 268, 345, 1318
Lsp1109I GCAGC 1 cut(s) 473
MabI ACCWGGT 1 cut(s) 1168
MaeI CTAG 2 cut(s) 786, 1566
MaeIII GTNAC 1 cut(s) 158
MalI GATC 6 cut(s) 311, 827, 924, 971, 1332, 1368
MboI GATC 6 cut(s) 309, 825, 922, 969, 1330, 1366
MboII GAAGA 9 cut(s) 16, 202, 496, 541, 634, 790, 896, 964, 1549
MhlI GDGCHC 5 cut(s) 82, 139, 342, 1192, 1544
MlsI TGGCCA 2 cut(s) 242, 1430
MluCI AATT 1 cut(s) 717
MluNI TGGCCA 2 cut(s) 242, 1430
Mly113I GGCGCC 1 cut(s) 1379
MlyI GAGTC 3 cut(s) 1064, 1157, 1490
MmeI TCCRAC 2 cut(s) 33, 738
Mox20I TGGCCA 2 cut(s) 242, 1430
MscI TGGCCA 2 cut(s) 242, 1430
MseI TTAA 3 cut(s) 402, 582, 846
Msp20I TGGCCA 2 cut(s) 242, 1430
MspA1I CMGCKG 2 cut(s) 1238, 1441
MspI CCGG 7 cut(s) 171, 180, 216, 301, 323, 1301, 1316
Mva1269I GAATGC 1 cut(s) 68
MvaI CCWGG 5 cut(s) 120, 133, 1090, 1170, 1410
MwoI GCNNNNNNNGC 3 cut(s) 248, 1196, 1571
NarI GGCGCC 1 cut(s) 1379
NciI CCSGG 5 cut(s) 171, 180, 217, 301, 323
NcoI CCATGG 1 cut(s) 1251
NdeII GATC 6 cut(s) 309, 825, 922, 969, 1330, 1366
NlaIII CATG 7 cut(s) 949, 1188, 1208, 1255, 1264, 1330, 1360
NlaIV GGNNCC 2 cut(s) 270, 1380
NspI RCATGY 1 cut(s) 1264
PceI AGGCCT 1 cut(s) 1093
PciI ACATGT 1 cut(s) 1260
PciSI GCTCTTC 1 cut(s) 1532
PctI GAATGC 1 cut(s) 68
PfeI GAWTC 6 cut(s) 5, 445, 456, 544, 938, 1012
PkrI GCNGC 2 cut(s) 125, 463
PleI GAGTC 3 cut(s) 1064, 1156, 1489
PluTI GGCGCC 1 cut(s) 1382
PpsI GAGTC 3 cut(s) 1064, 1156, 1489
PscI ACATGT 1 cut(s) 1260
Psp124BI GAGCTC 1 cut(s) 342
Psp6I CCWGG 5 cut(s) 118, 131, 1088, 1168, 1408
PspFI CCCAGC 2 cut(s) 1234, 1238
PspGI CCWGG 5 cut(s) 118, 131, 1088, 1168, 1408
PspN4I GGNNCC 2 cut(s) 270, 1380
PspPI GGNCC 4 cut(s) 148, 173, 369, 1172
PvuII CAGCTG 2 cut(s) 1238, 1441
RsaI GTAC 1 cut(s) 437
RsaNI GTAC 1 cut(s) 436
SacI GAGCTC 1 cut(s) 342
SapI GCTCTTC 1 cut(s) 1532
SaqAI TTAA 3 cut(s) 402, 582, 846
SatI GCNGC 2 cut(s) 124, 462
Sau3AI GATC 6 cut(s) 309, 825, 922, 969, 1330, 1366
Sau96I GGNCC 4 cut(s) 148, 173, 369, 1172
ScaI AGTACT 1 cut(s) 437
SchI GAGTC 3 cut(s) 1064, 1157, 1490
SduI GDGCHC 5 cut(s) 82, 139, 342, 1192, 1544
SexAI ACCWGGT 1 cut(s) 1168
SfcI CTRYAG 1 cut(s) 1245
SfoI GGCGCC 1 cut(s) 1380
SinI GGWCC 2 cut(s) 148, 1172
SmlI CTYRAG 2 cut(s) 313, 674
SmoI CTYRAG 2 cut(s) 313, 674
Sse9I AATT 1 cut(s) 717
SseBI AGGCCT 1 cut(s) 1093
SsiI CCGC 3 cut(s) 123, 266, 656
SspDI GGCGCC 1 cut(s) 1378
SspMI CTAG 2 cut(s) 786, 1566
SstI GAGCTC 1 cut(s) 342
StuI AGGCCT 1 cut(s) 1093
StyI CCWWGG 1 cut(s) 1251
TaaI ACNGT 5 cut(s) 350, 431, 628, 991, 1435
TaqII GACCGA 2 cut(s) 277, 281
TasI AATT 1 cut(s) 717
TatI WGTACW 1 cut(s) 435
TauI GCSGC 1 cut(s) 126
TfiI GAWTC 6 cut(s) 5, 445, 456, 544, 938, 1012
Tru1I TTAA 3 cut(s) 402, 582, 846
Tru9I TTAA 3 cut(s) 402, 582, 846
TscAI CASTG 5 cut(s) 207, 889, 940, 996, 1438
TseI GCWGC 1 cut(s) 461
TspDTI ATGAA 9 cut(s) 16, 79, 393, 542, 584, 635, 815, 1315, 1550
TspGWI ACGGA 2 cut(s) 85, 732
TspRI CASTG 5 cut(s) 207, 889, 940, 996, 1438
VpaK11BI GGWCC 2 cut(s) 148, 1172
XapI RAATTY 1 cut(s) 717
XceI RCATGY 1 cut(s) 1264
XcmI CCANNNNNNNNNTGG 1 cut(s) 58
XmiI GTMKAC 1 cut(s) 221
XspI CTAG 2 cut(s) 786, 1566
ZrmI AGTACT 1 cut(s) 437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.