sodium metabolite cotransporter BASS3
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0282761 |
| rosa_multiflora | Rmu_co8102940.1_g000001 |
| rosa_samantha | Rh6AG262300 Rh6BG265300 Rh6CG264600 Rh6DG257100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 169 |
| AccBSI | CCGCTC | 1 cut(s) | 275 |
| AccII | CGCG | 2 cut(s) | 105, 107 |
| AciI | CCGC | 4 cut(s) | 107, 198, 275, 302 |
| AcyI | GRCGYC | 1 cut(s) | 166 |
| AfaI | GTAC | 1 cut(s) | 63 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 178, 246 |
| AluBI | AGCT | 2 cut(s) | 38, 92 |
| AluI | AGCT | 2 cut(s) | 38, 92 |
| Alw26I | GTCTC | 3 cut(s) | 69, 75, 293 |
| ApeKI | GCWGC | 3 cut(s) | 195, 325, 340 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 213 |
| AspLEI | GCGC | 1 cut(s) | 107 |
| AsuHPI | GGTGA | 1 cut(s) | 289 |
| BbvI | GCAGC | 3 cut(s) | 207, 312, 327 |
| BceAI | ACGGC | 2 cut(s) | 156, 263 |
| BcoDI | GTCTC | 3 cut(s) | 69, 75, 293 |
| BisI | GCNGC | 3 cut(s) | 196, 326, 341 |
| BlpI | GCTNAGC | 1 cut(s) | 350 |
| BlsI | GCNGC | 3 cut(s) | 197, 327, 342 |
| BmiI | GGNNCC | 1 cut(s) | 264 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 350 |
| BsaHI | GRCGYC | 1 cut(s) | 166 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 178, 246 |
| Bse3DI | GCAATG | 1 cut(s) | 311 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 178, 246 |
| BseMI | GCAATG | 1 cut(s) | 311 |
| BseMII | CTCAG | 3 cut(s) | 70, 304, 364 |
| BseXI | GCAGC | 3 cut(s) | 207, 312, 327 |
| Bsh1236I | CGCG | 2 cut(s) | 105, 107 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 178, 246 |
| BsmAI | GTCTC | 3 cut(s) | 69, 75, 293 |
| BsmBI | CGTCTC | 1 cut(s) | 293 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 350 |
| BspACI | CCGC | 4 cut(s) | 107, 198, 275, 302 |
| BspCNI | CTCAG | 3 cut(s) | 71, 303, 363 |
| BspFNI | CGCG | 2 cut(s) | 105, 107 |
| BspLI | GGNNCC | 1 cut(s) | 264 |
| BspQI | GCTCTTC | 1 cut(s) | 99 |
| BsrBI | CCGCTC | 1 cut(s) | 275 |
| BsrDI | GCAATG | 1 cut(s) | 311 |
| BssNI | GRCGYC | 1 cut(s) | 166 |
| Bst6I | CTCTTC | 4 cut(s) | 99, 115, 177, 219 |
| BstACI | GRCGYC | 1 cut(s) | 166 |
| BstC8I | GCNNGC | 1 cut(s) | 356 |
| BstDEI | CTNAG | 3 cut(s) | 79, 290, 350 |
| BstFNI | CGCG | 2 cut(s) | 105, 107 |
| BstHHI | GCGC | 1 cut(s) | 107 |
| BstMAI | GTCTC | 3 cut(s) | 69, 75, 293 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 331, 340, 346, 355 |
| BstNSI | RCATGY | 1 cut(s) | 68 |
| BstUI | CGCG | 2 cut(s) | 105, 107 |
| BstV1I | GCAGC | 3 cut(s) | 207, 312, 327 |
| BtsI | GCAGTG | 1 cut(s) | 329 |
| BtsIMutI | CAGTG | 1 cut(s) | 329 |
| Cac8I | GCNNGC | 1 cut(s) | 356 |
| CfoI | GCGC | 1 cut(s) | 107 |
| Csp6I | GTAC | 1 cut(s) | 62 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 318, 353 |
| CviAII | CATG | 1 cut(s) | 65 |
| CviJI | RGCY | 7 cut(s) | 38, 57, 92, 250, 265, 349, 354 |
| CviKI_1 | RGCY | 7 cut(s) | 38, 57, 92, 250, 265, 349, 354 |
| CviQI | GTAC | 1 cut(s) | 62 |
| DdeI | CTNAG | 3 cut(s) | 79, 290, 350 |
| Eam1104I | CTCTTC | 4 cut(s) | 99, 115, 177, 219 |
| EarI | CTCTTC | 4 cut(s) | 99, 115, 177, 219 |
| Esp3I | CGTCTC | 1 cut(s) | 293 |
| FaeI | CATG | 1 cut(s) | 68 |
| FaiI | YATR | 4 cut(s) | 10, 66, 178, 253 |
| FatI | CATG | 1 cut(s) | 64 |
| Fnu4HI | GCNGC | 3 cut(s) | 196, 326, 341 |
| Fsp4HI | GCNGC | 3 cut(s) | 196, 326, 341 |
| GlaI | GCGC | 1 cut(s) | 106 |
| GluI | GCNGC | 3 cut(s) | 196, 326, 341 |
| HhaI | GCGC | 1 cut(s) | 107 |
| Hin1I | GRCGYC | 1 cut(s) | 166 |
| Hin1II | CATG | 1 cut(s) | 68 |
| Hin6I | GCGC | 1 cut(s) | 105 |
| HinP1I | GCGC | 1 cut(s) | 105 |
| HinfI | GANTC | 1 cut(s) | 283 |
| HphI | GGTGA | 1 cut(s) | 289 |
| Hpy166II | GTNNAC | 1 cut(s) | 365 |
| Hpy188I | TCNGA | 2 cut(s) | 133, 146 |
| Hpy188III | TCNNGA | 1 cut(s) | 117 |
| Hpy8I | GTNNAC | 1 cut(s) | 365 |
| Hpy99I | CGWCG | 2 cut(s) | 168, 171 |
| HpyAV | CCTTC | 2 cut(s) | 24, 199 |
| HpyCH4IV | ACGT | 2 cut(s) | 166, 361 |
| HpyCH4V | TGCA | 1 cut(s) | 68 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 331, 340, 346, 355 |
| HpyF3I | CTNAG | 3 cut(s) | 79, 290, 350 |
| HpySE526I | ACGT | 2 cut(s) | 166, 361 |
| Hsp92I | GRCGYC | 1 cut(s) | 166 |
| Hsp92II | CATG | 1 cut(s) | 68 |
| HspAI | GCGC | 1 cut(s) | 105 |
| LguI | GCTCTTC | 1 cut(s) | 99 |
| LmnI | GCTCC | 1 cut(s) | 262 |
| LpnPI | CCDG | 2 cut(s) | 277, 368 |
| Lsp1109I | GCAGC | 3 cut(s) | 207, 312, 327 |
| MaeII | ACGT | 2 cut(s) | 166, 361 |
| MbiI | CCGCTC | 1 cut(s) | 275 |
| MboII | GAAGA | 4 cut(s) | 86, 132, 194, 206 |
| MlyI | GAGTC | 1 cut(s) | 277 |
| MnlI | CCTC | 3 cut(s) | 116, 194, 273 |
| MroXI | GAANNNNTTC | 1 cut(s) | 213 |
| MspA1I | CMGCKG | 1 cut(s) | 198 |
| MvnI | CGCG | 2 cut(s) | 105, 107 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 331, 340, 346, 355 |
| NlaIII | CATG | 1 cut(s) | 68 |
| NlaIV | GGNNCC | 1 cut(s) | 264 |
| NspI | RCATGY | 1 cut(s) | 68 |
| PciSI | GCTCTTC | 1 cut(s) | 99 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 109, 169, 223 |
| PdmI | GAANNNNTTC | 1 cut(s) | 213 |
| PkrI | GCNGC | 3 cut(s) | 197, 327, 342 |
| PleI | GAGTC | 1 cut(s) | 277 |
| PpsI | GAGTC | 1 cut(s) | 277 |
| PspN4I | GGNNCC | 1 cut(s) | 264 |
| RsaI | GTAC | 1 cut(s) | 63 |
| RsaNI | GTAC | 1 cut(s) | 62 |
| SapI | GCTCTTC | 1 cut(s) | 99 |
| SatI | GCNGC | 3 cut(s) | 196, 326, 341 |
| SchI | GAGTC | 1 cut(s) | 277 |
| SetI | ASST | 5 cut(s) | 40, 94, 169, 296, 364 |
| SsiI | CCGC | 4 cut(s) | 107, 198, 275, 302 |
| TaiI | ACGT | 2 cut(s) | 169, 364 |
| TaqI | TCGA | 2 cut(s) | 118, 163 |
| TatI | WGTACW | 1 cut(s) | 61 |
| TscAI | CASTG | 1 cut(s) | 336 |
| TseI | GCWGC | 3 cut(s) | 195, 325, 340 |
| TspDTI | ATGAA | 2 cut(s) | 6, 86 |
| TspRI | CASTG | 1 cut(s) | 336 |
| XceI | RCATGY | 1 cut(s) | 68 |
| XmnI | GAANNNNTTC | 1 cut(s) | 213 |
| ZraI | GACGTC | 1 cut(s) | 167 |