Rmu_co8298525.1_g000001

Plant protein 1589 of unknown function (A_thal_3526)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8298525.1
Physical Location & Seq
Reverse (-)
1 .. 363
363 bp
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UTR
Exon/CDS
Intron
Rmu_co8298525.1_g000001.1.cds

Sequence Viewer

Length: 171 bp
atgaagacgttacagagtgggcaagaaatacaatcttcaaaccaagctatacatgatacacaaggtgaccaagtgaaaaaccaaacaaatgaggctcctggaactgattcagcttcaatatcatcttcaggcaacgacaacaagaaagtatcacgccaagatattgaactt
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

57

Amino Acids

6.12

Weight (kDa)

4.7

Isoelectric Point (pI)

63.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031008)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8298525.1_g000001 Rmu_ssc0000135.1_g000039

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 111
AdeI CACNNNGTG 1 cut(s) 65
AgsI TTSAA 3 cut(s) 39, 117, 167
AjnI CCWGG 1 cut(s) 97
AluBI AGCT 2 cut(s) 47, 113
AluI AGCT 2 cut(s) 47, 113
Asp700I GAANNNNTTC 1 cut(s) 106
AsuHPI GGTGA 1 cut(s) 77
BbsI GAAGAC 1 cut(s) 11
BciT130I CCWGG 1 cut(s) 99
Bme1390I CCNGG 1 cut(s) 99
BmiI GGNNCC 1 cut(s) 96
BmrFI CCNGG 1 cut(s) 99
BpiI GAAGAC 1 cut(s) 11
BseBI CCWGG 1 cut(s) 99
BspLI GGNNCC 1 cut(s) 96
Bst2UI CCWGG 1 cut(s) 99
BstEII GGTNACC 1 cut(s) 65
BstNI CCWGG 1 cut(s) 99
BstPI GGTNACC 1 cut(s) 65
BstSCI CCNGG 1 cut(s) 97
BstV2I GAAGAC 1 cut(s) 11
CviAII CATG 1 cut(s) 53
CviJI RGCY 3 cut(s) 47, 95, 113
CviKI_1 RGCY 3 cut(s) 47, 95, 113
DraIII CACNNNGTG 1 cut(s) 65
Eco57I CTGAAG 1 cut(s) 111
Eco91I GGTNACC 1 cut(s) 65
EcoO65I GGTNACC 1 cut(s) 65
EcoRII CCWGG 1 cut(s) 97
FaeI CATG 1 cut(s) 56
FaiI YATR 2 cut(s) 50, 54
FatI CATG 1 cut(s) 52
Hin1II CATG 1 cut(s) 56
HinfI GANTC 1 cut(s) 107
HphI GGTGA 1 cut(s) 77
HpyCH4IV ACGT 1 cut(s) 8
HpySE526I ACGT 1 cut(s) 8
Hsp92II CATG 1 cut(s) 56
LmnI GCTCC 1 cut(s) 100
LpnPI CCDG 3 cut(s) 84, 111, 114
MaeII ACGT 1 cut(s) 8
MaeIII GTNAC 2 cut(s) 9, 65
MboII GAAGA 3 cut(s) 16, 27, 117
MnlI CCTC 1 cut(s) 85
MroXI GAANNNNTTC 1 cut(s) 106
MspR9I CCNGG 1 cut(s) 99
MvaI CCWGG 1 cut(s) 99
NlaIII CATG 1 cut(s) 56
NlaIV GGNNCC 1 cut(s) 96
NmuCI GTSAC 1 cut(s) 65
PdmI GAANNNNTTC 1 cut(s) 106
PfeI GAWTC 1 cut(s) 107
PfoI TCCNGGA 1 cut(s) 97
Psp6I CCWGG 1 cut(s) 97
PspEI GGTNACC 1 cut(s) 65
PspGI CCWGG 1 cut(s) 97
PspN4I GGNNCC 1 cut(s) 96
ScrFI CCNGG 1 cut(s) 99
SetI ASST 4 cut(s) 11, 49, 67, 115
StyD4I CCNGG 1 cut(s) 97
TaiI ACGT 1 cut(s) 11
TfiI GAWTC 1 cut(s) 107
TseFI GTSAC 1 cut(s) 65
Tsp45I GTSAC 1 cut(s) 65
TspDTI ATGAA 1 cut(s) 17
XmnI GAANNNNTTC 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.