Rmu_co8314189.1_g000001
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8314189.1
OG0031038
Physical Location & Seq
Reverse (-)
1 .. 661
661 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8314189.1_g000001.1.cds

Sequence Viewer

Length: 396 bp
atgatggtgtcggcgtcgccgtcgatggtggcgaggagctccttggaggaaatgctggattcgctgcggcggagggacgaggctgagaagcccaaggaattgccgccggcattgccgtcccggcccacttccaaggctcggctgccgtcggcgcgccgctccttgcccaacaacttcaatgccgaggccttaatccggtcgccggagtgggcccccagtgtgaacaagaggaaagagagggattccggggtcaagaggtgtaataatttttgtgtcaagaagacggagaaggacgcggtggagtcgccgtacgttgcgtcggaggaggagcttcagagccggcaaaaggtggcgaagtccgattggggtgacaacgttgcttatttcatcatgaag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000146 GO:0000166 GO:0000278 GO:0000281 GO:0000302 GO:0000910 GO:0001891 GO:0001931 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005826 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005938 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006971 GO:0006979 GO:0006996 GO:0007010 GO:0007015 GO:0007033 GO:0007049 GO:0007154 GO:0008064 GO:0008092 GO:0008104 GO:0008144 GO:0008150 GO:0008360 GO:0009267 GO:0009506 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009636 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010243 GO:0010639 GO:0012505 GO:0014070 GO:0014074 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016459 GO:0016460 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030038 GO:0030048 GO:0030054 GO:0030139 GO:0030554 GO:0030587 GO:0030832 GO:0030833 GO:0030837 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0030898 GO:0031033 GO:0031034 GO:0031152 GO:0031154 GO:0031254 GO:0031268 GO:0031270 GO:0031333 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031982 GO:0032009 GO:0032060 GO:0032153 GO:0032155 GO:0032271 GO:0032272 GO:0032502 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032796 GO:0032956 GO:0032970 GO:0032982 GO:0032991 GO:0033036 GO:0033043 GO:0033275 GO:0033298 GO:0033554 GO:0034461 GO:0034622 GO:0035639 GO:0036094 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0042542 GO:0042594 GO:0042623 GO:0042641 GO:0042802 GO:0042803 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0044877 GO:0045177 GO:0045179 GO:0045335 GO:0046677 GO:0046683 GO:0046847 GO:0046983 GO:0048519 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050982 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051179 GO:0051301 GO:0051493 GO:0051494 GO:0051591 GO:0051606 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0055044 GO:0060327 GO:0060328 GO:0061572 GO:0061640 GO:0065003 GO:0065007 GO:0065008 GO:0070252 GO:0070938 GO:0071496 GO:0071840 GO:0071889 GO:0071944 GO:0090066 GO:0090702 GO:0097159 GO:0097204 GO:0097367 GO:0097435 GO:0097708 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0110053 GO:0120025 GO:0120031 GO:0120036 GO:1901265 GO:1901363 GO:1901698 GO:1901700 GO:1902903 GO:1902904 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ Myosin_N Myosin_head

Protein Analysis

132

Amino Acids

14.94

Weight (kDa)

9.51

Isoelectric Point (pI)

88.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0031038)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8314189.1_g000001 Rmu_sc0000084.1_g000052

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 159
AccII CGCG 2 cut(s) 154, 296
AciI CCGC 5 cut(s) 67, 70, 104, 157, 296
AclI AACGTT 1 cut(s) 375
AcuI CTGAAG 1 cut(s) 317
AcyI GRCGYC 1 cut(s) 14
AfaI GTAC 1 cut(s) 311
AfiI CCNNNNNNNGG 4 cut(s) 138, 195, 202, 346
AgsI TTSAA 1 cut(s) 178
AluBI AGCT 2 cut(s) 39, 331
AluI AGCT 2 cut(s) 39, 331
Alw21I GWGCWC 1 cut(s) 41
AoxI GGCC 3 cut(s) 122, 186, 210
ApaI GGGCCC 1 cut(s) 214
ApeKI GCWGC 2 cut(s) 64, 142
AscI GGCGCGCC 1 cut(s) 152
AspLEI GCGC 2 cut(s) 154, 156
AspS9I GGNCC 3 cut(s) 123, 210, 211
AsuC2I CCSGG 2 cut(s) 121, 247
AsuHPI GGTGA 1 cut(s) 380
BaeGI GKGCMC 1 cut(s) 214
BanII GRGCYC 2 cut(s) 41, 214
BbsI GAAGAC 1 cut(s) 287
Bbv12I GWGCWC 1 cut(s) 41
BbvI GCAGC 2 cut(s) 51, 129
BccI CCATC 1 cut(s) 19
BceAI ACGGC 4 cut(s) 4, 100, 130, 292
BcnI CCSGG 2 cut(s) 121, 247
BglI GCCNNNNNGGC 1 cut(s) 121
BisI GCNGC 5 cut(s) 65, 68, 104, 143, 157
BlsI GCNGC 5 cut(s) 66, 69, 105, 144, 158
Bme1390I CCNGG 2 cut(s) 121, 247
BmgT120I GGNCC 3 cut(s) 123, 210, 211
BmiI GGNNCC 2 cut(s) 212, 213
BmrFI CCNGG 2 cut(s) 121, 247
BmrI ACTGGG 1 cut(s) 210
BmuI ACTGGG 1 cut(s) 210
BpiI GAAGAC 1 cut(s) 287
BpuMI CCSGG 2 cut(s) 121, 247
BsaHI GRCGYC 1 cut(s) 14
BsaJI CCNNGG 5 cut(s) 42, 93, 132, 183, 246
BsaWI WCCGGW 1 cut(s) 195
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 4 cut(s) 138, 195, 202, 346
Bse118I RCCGGY 2 cut(s) 106, 339
Bse1I ACTGG 1 cut(s) 216
Bse3DI GCAATG 1 cut(s) 110
BseDI CCNNGG 5 cut(s) 42, 93, 132, 183, 246
BseLI CCNNNNNNNGG 4 cut(s) 138, 195, 202, 346
BseMI GCAATG 1 cut(s) 110
BseMII CTCAG 1 cut(s) 75
BseNI ACTGG 1 cut(s) 216
BsePI GCGCGC 1 cut(s) 152
BseRI GAGGAG 3 cut(s) 49, 338, 341
BseSI GKGCMC 1 cut(s) 214
BseXI GCAGC 2 cut(s) 51, 129
Bsh1236I CGCG 2 cut(s) 154, 296
Bsh1285I CGRYCG 1 cut(s) 200
BshFI GGCC 3 cut(s) 124, 188, 212
BsiEI CGRYCG 1 cut(s) 200
BsiHKAI GWGCWC 1 cut(s) 41
BsiSI CCGG 6 cut(s) 107, 121, 196, 203, 246, 340
BsiWI CGTACG 1 cut(s) 309
BslFI GGGAC 2 cut(s) 89, 103
BslI CCNNNNNNNGG 4 cut(s) 138, 195, 202, 346
BsmFI GGGAC 2 cut(s) 89, 103
BsnI GGCC 3 cut(s) 124, 188, 212
Bsp120I GGGCCC 1 cut(s) 210
Bsp1286I GDGCHC 2 cut(s) 41, 214
BspACI CCGC 5 cut(s) 67, 70, 104, 157, 296
BspANI GGCC 3 cut(s) 124, 188, 212
BspCNI CTCAG 1 cut(s) 76
BspFNI CGCG 2 cut(s) 154, 296
BspHI TCATGA 1 cut(s) 390
BspLI GGNNCC 2 cut(s) 212, 213
BsrBI CCGCTC 1 cut(s) 159
BsrDI GCAATG 1 cut(s) 110
BsrFI RCCGGY 2 cut(s) 106, 339
BsrI ACTGG 1 cut(s) 216
BssAI RCCGGY 2 cut(s) 106, 339
BssECI CCNNGG 5 cut(s) 42, 93, 132, 183, 246
BssHII GCGCGC 1 cut(s) 152
BssNI GRCGYC 1 cut(s) 14
BssT1I CCWWGG 3 cut(s) 42, 93, 132
BstACI GRCGYC 1 cut(s) 14
BstC8I GCNNGC 3 cut(s) 108, 154, 341
BstDEI CTNAG 1 cut(s) 84
BstFNI CGCG 2 cut(s) 154, 296
BstHHI GCGC 2 cut(s) 154, 156
BstMCI CGRYCG 1 cut(s) 200
BstMWI GCNNNNNNNGC 4 cut(s) 61, 112, 121, 151
BstSCI CCNGG 2 cut(s) 119, 245
BstSLI GKGCMC 1 cut(s) 214
BstUI CGCG 2 cut(s) 154, 296
BstV1I GCAGC 2 cut(s) 51, 129
BstV2I GAAGAC 1 cut(s) 287
BsuRI GGCC 3 cut(s) 124, 188, 212
BtsIMutI CAGTG 1 cut(s) 223
Cac8I GCNNGC 3 cut(s) 108, 154, 341
CciI TCATGA 1 cut(s) 390
CfoI GCGC 2 cut(s) 154, 156
Cfr10I RCCGGY 2 cut(s) 106, 339
Cfr13I GGNCC 3 cut(s) 123, 210, 211
CseI GACGC 3 cut(s) 3, 302, 306
Csp6I GTAC 1 cut(s) 310
CviAII CATG 1 cut(s) 391
CviQI GTAC 1 cut(s) 310
DdeI CTNAG 1 cut(s) 84
EciI GGCGGA 1 cut(s) 85
Ecl136II GAGCTC 1 cut(s) 39
Eco130I CCWWGG 3 cut(s) 42, 93, 132
Eco147I AGGCCT 1 cut(s) 188
Eco24I GRGCYC 2 cut(s) 41, 214
Eco53kI GAGCTC 1 cut(s) 39
Eco57I CTGAAG 1 cut(s) 317
EcoICRI GAGCTC 1 cut(s) 39
EcoO109I RGGNCCY 1 cut(s) 211
EcoT14I CCWWGG 3 cut(s) 42, 93, 132
EcoT38I GRGCYC 2 cut(s) 41, 214
ErhI CCWWGG 3 cut(s) 42, 93, 132
FaeI CATG 1 cut(s) 394
FaiI YATR 1 cut(s) 392
FaqI GGGAC 2 cut(s) 89, 103
FatI CATG 1 cut(s) 390
Fnu4HI GCNGC 5 cut(s) 65, 68, 104, 143, 157
FriOI GRGCYC 2 cut(s) 41, 214
Fsp4HI GCNGC 5 cut(s) 65, 68, 104, 143, 157
GlaI GCGC 2 cut(s) 153, 155
GluI GCNGC 5 cut(s) 65, 68, 104, 143, 157
HaeIII GGCC 3 cut(s) 124, 188, 212
HapII CCGG 6 cut(s) 107, 121, 196, 203, 246, 340
HgaI GACGC 3 cut(s) 3, 302, 306
HhaI GCGC 2 cut(s) 154, 156
Hin1I GRCGYC 1 cut(s) 14
Hin1II CATG 1 cut(s) 394
Hin6I GCGC 2 cut(s) 152, 154
HinP1I GCGC 2 cut(s) 152, 154
HinfI GANTC 3 cut(s) 59, 242, 302
HpaII CCGG 6 cut(s) 107, 121, 196, 203, 246, 340
HphI GGTGA 1 cut(s) 380
Hpy166II GTNNAC 1 cut(s) 223
Hpy188I TCNGA 3 cut(s) 322, 336, 361
Hpy188III TCNNGA 3 cut(s) 253, 277, 391
Hpy8I GTNNAC 1 cut(s) 223
Hpy99I CGWCG 4 cut(s) 19, 25, 151, 322
HpyAV CCTTC 1 cut(s) 283
HpyCH4IV ACGT 2 cut(s) 312, 375
HpyF10VI GCNNNNNNNGC 4 cut(s) 61, 112, 121, 151
HpyF3I CTNAG 1 cut(s) 84
HpySE526I ACGT 2 cut(s) 312, 375
Hsp92I GRCGYC 1 cut(s) 14
Hsp92II CATG 1 cut(s) 394
HspAI GCGC 2 cut(s) 152, 154
KroI GCCGGC 2 cut(s) 106, 339
KroNI GCCGGC 2 cut(s) 108, 341
LmnI GCTCC 4 cut(s) 36, 44, 164, 328
LpnPI CCDG 8 cut(s) 41, 120, 134, 209, 216, 229, 259, 353
Lsp1109I GCAGC 2 cut(s) 51, 129
MaeII ACGT 2 cut(s) 312, 375
MaeIII GTNAC 1 cut(s) 368
MbiI CCGCTC 1 cut(s) 159
MboII GAAGA 1 cut(s) 292
MhlI GDGCHC 2 cut(s) 41, 214
MluCI AATT 2 cut(s) 98, 265
MlyI GAGTC 1 cut(s) 311
MmeI TCCRAC 1 cut(s) 300
MroNI GCCGGC 2 cut(s) 106, 339
MseI TTAA 1 cut(s) 191
MspI CCGG 6 cut(s) 107, 121, 196, 203, 246, 340
MspR9I CCNGG 2 cut(s) 121, 247
MvnI CGCG 2 cut(s) 154, 296
MwoI GCNNNNNNNGC 4 cut(s) 61, 112, 121, 151
NaeI GCCGGC 2 cut(s) 108, 341
NciI CCSGG 2 cut(s) 121, 247
NgoMIV GCCGGC 2 cut(s) 106, 339
NlaIII CATG 1 cut(s) 394
NlaIV GGNNCC 2 cut(s) 212, 213
NmeAIII GCCGAG 2 cut(s) 118, 208
NmuCI GTSAC 1 cut(s) 368
PagI TCATGA 1 cut(s) 390
PalAI GGCGCGCC 1 cut(s) 152
PauI GCGCGC 1 cut(s) 152
PceI AGGCCT 1 cut(s) 188
PcsI WCGNNNNNNNCGW 2 cut(s) 17, 29
PdiI GCCGGC 2 cut(s) 108, 341
PfeI GAWTC 2 cut(s) 59, 242
Pfl23II CGTACG 1 cut(s) 309
PkrI GCNGC 5 cut(s) 66, 69, 105, 144, 158
PleI GAGTC 1 cut(s) 310
PpsI GAGTC 1 cut(s) 310
Psp124BI GAGCTC 1 cut(s) 41
Psp1406I AACGTT 1 cut(s) 375
PspLI CGTACG 1 cut(s) 309
PspN4I GGNNCC 2 cut(s) 212, 213
PspOMI GGGCCC 1 cut(s) 210
PspPI GGNCC 3 cut(s) 123, 210, 211
PteI GCGCGC 1 cut(s) 152
RsaI GTAC 1 cut(s) 311
RsaNI GTAC 1 cut(s) 310
SacI GAGCTC 1 cut(s) 41
SaqAI TTAA 1 cut(s) 191
SatI GCNGC 5 cut(s) 65, 68, 104, 143, 157
Sau96I GGNCC 3 cut(s) 123, 210, 211
SchI GAGTC 1 cut(s) 311
ScrFI CCNGG 2 cut(s) 121, 247
SduI GDGCHC 2 cut(s) 41, 214
SetI ASST 6 cut(s) 41, 260, 315, 333, 351, 378
SgsI GGCGCGCC 1 cut(s) 152
Sse9I AATT 2 cut(s) 98, 265
SseBI AGGCCT 1 cut(s) 188
SsiI CCGC 5 cut(s) 67, 70, 104, 157, 296
SstI GAGCTC 1 cut(s) 41
StuI AGGCCT 1 cut(s) 188
StyD4I CCNGG 2 cut(s) 119, 245
StyI CCWWGG 3 cut(s) 42, 93, 132
TaiI ACGT 2 cut(s) 315, 378
TaqI TCGA 1 cut(s) 23
TasI AATT 2 cut(s) 98, 265
TauI GCSGC 3 cut(s) 70, 106, 159
TfiI GAWTC 2 cut(s) 59, 242
Tru1I TTAA 1 cut(s) 191
Tru9I TTAA 1 cut(s) 191
TscAI CASTG 1 cut(s) 223
TseFI GTSAC 1 cut(s) 368
TseI GCWGC 2 cut(s) 64, 142
Tsp45I GTSAC 1 cut(s) 368
TspDTI ATGAA 1 cut(s) 376
TspGWI ACGGA 1 cut(s) 299
TspRI CASTG 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.