Rmu_sc0000202.1_g000015

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000202.1
Physical Location & Seq
Reverse (-)
56729 .. 56995
267 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 267 bp
atgaatgaagaagaccccagaaagttgtggatcccactcgaaaaaagatttcgcaacgtccgtgactccctgcttcctgacctagaagtgaaatggcatagcctccgcttctgtgatttcaagtcagttcttgactacaactcggaagcacttcgcattaaatccttaatggaattctgtggtaaagagatcacagatgcgatgttgattgagaaaaccctctctaccttccccgtctctgcattgatggttgctaagaactattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

88

Amino Acids

10.41

Weight (kDa)

6.57

Isoelectric Point (pI)

44.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031049)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0000202.1_g000015 Rmu_sc0001966.1_g000009

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 106
AclWI GGATC 2 cut(s) 25, 38
AcsI RAATTY 1 cut(s) 173
AgsI TTSAA 1 cut(s) 121
Alw26I GTCTC 1 cut(s) 241
AlwI GGATC 2 cut(s) 25, 38
ApoI RAATTY 1 cut(s) 173
Asp700I GAANNNNTTC 1 cut(s) 150
BamHI GGATCC 1 cut(s) 30
BbsI GAAGAC 1 cut(s) 18
BccI CCATC 1 cut(s) 241
BcoDI GTCTC 1 cut(s) 241
BfaI CTAG 1 cut(s) 83
BmiI GGNNCC 1 cut(s) 32
BmsI GCATC 1 cut(s) 187
BpiI GAAGAC 1 cut(s) 18
BsmAI GTCTC 1 cut(s) 241
BsmBI CGTCTC 1 cut(s) 241
Bsp143I GATC 2 cut(s) 30, 189
BspACI CCGC 1 cut(s) 106
BspLI GGNNCC 1 cut(s) 32
BspPI GGATC 2 cut(s) 25, 38
BssMI GATC 2 cut(s) 30, 189
BstDEI CTNAG 1 cut(s) 255
BstKTI GATC 2 cut(s) 33, 192
BstMAI GTCTC 1 cut(s) 241
BstMBI GATC 2 cut(s) 30, 189
BstV2I GAAGAC 1 cut(s) 18
BstX2I RGATCY 1 cut(s) 30
BstYI RGATCY 1 cut(s) 30
BtgZI GCGATG 1 cut(s) 215
CviJI RGCY 1 cut(s) 102
CviKI_1 RGCY 1 cut(s) 102
DdeI CTNAG 1 cut(s) 255
DpnI GATC 2 cut(s) 32, 191
DpnII GATC 2 cut(s) 30, 189
EcoRI GAATTC 1 cut(s) 173
Esp3I CGTCTC 1 cut(s) 241
FaiI YATR 1 cut(s) 99
FspBI CTAG 1 cut(s) 83
HinfI GANTC 1 cut(s) 65
Hpy188I TCNGA 1 cut(s) 145
Hpy188III TCNNGA 2 cut(s) 77, 131
HpyAV CCTTC 1 cut(s) 238
HpyCH4IV ACGT 1 cut(s) 57
HpyCH4V TGCA 1 cut(s) 242
HpyF3I CTNAG 1 cut(s) 255
HpySE526I ACGT 1 cut(s) 57
Kzo9I GATC 2 cut(s) 30, 189
LpnPI CCDG 3 cut(s) 31, 83, 90
LweI GCATC 1 cut(s) 187
MaeI CTAG 1 cut(s) 83
MaeII ACGT 1 cut(s) 57
MaeIII GTNAC 1 cut(s) 62
MalI GATC 2 cut(s) 32, 191
MboI GATC 2 cut(s) 30, 189
MboII GAAGA 2 cut(s) 20, 23
MflI RGATCY 1 cut(s) 30
MluCI AATT 1 cut(s) 173
MlyI GAGTC 1 cut(s) 59
MnlI CCTC 2 cut(s) 113, 230
MroXI GAANNNNTTC 1 cut(s) 150
MseI TTAA 2 cut(s) 159, 167
NdeII GATC 2 cut(s) 30, 189
NlaIV GGNNCC 1 cut(s) 32
NmuCI GTSAC 1 cut(s) 62
PcsI WCGNNNNNNNCGW 1 cut(s) 58
PdmI GAANNNNTTC 1 cut(s) 150
PleI GAGTC 1 cut(s) 59
PpsI GAGTC 1 cut(s) 59
PspN4I GGNNCC 1 cut(s) 32
PsuI RGATCY 1 cut(s) 30
SaqAI TTAA 2 cut(s) 159, 167
Sau3AI GATC 2 cut(s) 30, 189
SchI GAGTC 1 cut(s) 59
SetI ASST 3 cut(s) 60, 84, 230
SfaNI GCATC 1 cut(s) 187
Sse9I AATT 1 cut(s) 173
SsiI CCGC 1 cut(s) 106
SspMI CTAG 1 cut(s) 83
TaiI ACGT 1 cut(s) 60
TaqI TCGA 1 cut(s) 39
TasI AATT 1 cut(s) 173
Tru1I TTAA 2 cut(s) 159, 167
Tru9I TTAA 2 cut(s) 159, 167
TseFI GTSAC 1 cut(s) 62
Tsp45I GTSAC 1 cut(s) 62
TspDTI ATGAA 2 cut(s) 17, 21
TspGWI ACGGA 1 cut(s) 50
XapI RAATTY 1 cut(s) 173
XmnI GAANNNNTTC 1 cut(s) 150
XspI CTAG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.