Rmu_sc0000295.1_g000024

Thymidine

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000295.1
Physical Location & Seq
Forward (+)
132701 .. 133074
374 bp
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UTR
Exon/CDS
Intron
Rmu_sc0000295.1_g000024.1.cds

Sequence Viewer

Length: 291 bp
atgggatatggtcttgaccattttataggggaagctctaatgcaagctgcacaagaagtggctgaggggaagcaagtgaaagattcatcatatagtctgaaactcaatgtatggcaaagagctttctttaccctgaagaagacaaagaaaacgaagaccgaactgattggcggggctgatgtctacataactgtttttctccaacaccgtgtcaatggacaagttctcaatgcgttgtggagtctcataaatctgagtggcaccatttcagaagcagctccagttatttag

Protein Analysis

96

Amino Acids

10.6

Weight (kDa)

9.0

Isoelectric Point (pI)

18.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031061)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0000295.1_g000024
rosa_samantha Rh3AG261200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 260
AccI GTMKAC 1 cut(s) 183
AciI CCGC 1 cut(s) 171
AcuI CTGAAG 1 cut(s) 155
AluBI AGCT 4 cut(s) 35, 47, 122, 278
AluI AGCT 4 cut(s) 35, 47, 122, 278
Alw26I GTCTC 1 cut(s) 248
ApeKI GCWGC 2 cut(s) 47, 275
BanI GGYRCC 1 cut(s) 260
BbsI GAAGAC 2 cut(s) 146, 161
BbvCI CCTCAGC 1 cut(s) 63
BbvI GCAGC 2 cut(s) 34, 287
BcoDI GTCTC 1 cut(s) 248
BisI GCNGC 2 cut(s) 48, 276
BlsI GCNGC 2 cut(s) 49, 277
BmiI GGNNCC 1 cut(s) 262
BpiI GAAGAC 2 cut(s) 146, 161
BpmI CTGGAG 1 cut(s) 264
Bpu10I CCTNAGC 1 cut(s) 63
Bse1I ACTGG 1 cut(s) 281
BseMII CTCAG 2 cut(s) 54, 245
BseNI ACTGG 1 cut(s) 281
BseXI GCAGC 2 cut(s) 34, 287
BsgI GTGCAG 1 cut(s) 33
BshNI GGYRCC 1 cut(s) 260
BsmAI GTCTC 1 cut(s) 248
BspACI CCGC 1 cut(s) 171
BspCNI CTCAG 2 cut(s) 55, 246
BspLI GGNNCC 1 cut(s) 262
BspT107I GGYRCC 1 cut(s) 260
BsrI ACTGG 1 cut(s) 281
Bst4CI ACNGT 2 cut(s) 193, 209
BstC8I GCNNGC 1 cut(s) 45
BstDEI CTNAG 2 cut(s) 63, 254
BstMAI GTCTC 1 cut(s) 248
BstV1I GCAGC 2 cut(s) 34, 287
BstV2I GAAGAC 2 cut(s) 146, 161
Cac8I GCNNGC 1 cut(s) 45
CviJI RGCY 6 cut(s) 35, 47, 62, 122, 176, 278
CviKI_1 RGCY 6 cut(s) 35, 47, 62, 122, 176, 278
DdeI CTNAG 2 cut(s) 63, 254
Eco57I CTGAAG 1 cut(s) 155
FaiI YATR 7 cut(s) 9, 26, 91, 93, 112, 188, 248
FauI CCCGC 1 cut(s) 164
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 2 cut(s) 48, 276
Fsp4HI GCNGC 2 cut(s) 48, 276
GluI GCNGC 2 cut(s) 48, 276
GsuI CTGGAG 1 cut(s) 264
HinfI GANTC 2 cut(s) 83, 241
Hpy166II GTNNAC 1 cut(s) 184
Hpy188I TCNGA 3 cut(s) 99, 255, 271
Hpy188III TCNNGA 1 cut(s) 14
Hpy8I GTNNAC 1 cut(s) 184
HpyCH4III ACNGT 2 cut(s) 193, 209
HpyCH4V TGCA 2 cut(s) 43, 50
HpyF3I CTNAG 2 cut(s) 63, 254
LmnI GCTCC 1 cut(s) 283
LpnPI CCDG 1 cut(s) 146
Lsp1109I GCAGC 2 cut(s) 34, 287
MboII GAAGA 3 cut(s) 148, 151, 166
MlyI GAGTC 1 cut(s) 250
MmeI TCCRAC 1 cut(s) 226
MnlI CCTC 1 cut(s) 58
NlaIV GGNNCC 1 cut(s) 262
PfeI GAWTC 1 cut(s) 83
PkrI GCNGC 2 cut(s) 49, 277
PleI GAGTC 1 cut(s) 249
PpsI GAGTC 1 cut(s) 249
PspN4I GGNNCC 1 cut(s) 262
SatI GCNGC 2 cut(s) 48, 276
SchI GAGTC 1 cut(s) 250
SetI ASST 4 cut(s) 37, 49, 124, 280
SgeI CNNG 8 cut(s) 26, 56, 65, 86, 145, 184, 221, 233
SsiI CCGC 1 cut(s) 171
TaaI ACNGT 2 cut(s) 193, 209
TaqII GACCGA 1 cut(s) 173
TfiI GAWTC 1 cut(s) 83
TseI GCWGC 2 cut(s) 47, 275
TspDTI ATGAA 1 cut(s) 75
XmiI GTMKAC 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.