Rmu_sc0000610.1_g000010

Protein CHAPERONE-LIKE PROTEIN OF POR1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000610.1
Physical Location & Seq
Forward (+)
26320 .. 27344
1025 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 495 bp
atggctttagcaatttcccatgctcttctctgccccaaattgcagtttccccaaaggaatttccgccctaaagctccagccctgagtttctcacctcccaatttcagagcaattccacagaatagaaggatagtgttggccgctgcatctgcagctggaagttctaattcggacagtggtttgaatccgtatgaggttctcggtgtgaacccgattgaggggtttgacatggtcaaggcagcgtataagaaaaaacacaaggaggctgtaagcaatggtgatgaagaagctgctgctagactggagaaagcatatgacaaacttatgatggcacaactaacaaacaggaagaaaggcttgacatttggttcttttaaggtacatgcagtgaagtcaaattttctagttctgattctgttgcggttgaatttaattatcaatacagaaatcaagtggatgttactgcatacatttgaattttcacaactggcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

164

Amino Acids

18.2

Weight (kDa)

9.95

Isoelectric Point (pI)

37.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028033)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g01860
rosa_multiflora Rmu_sc0000610.1_g000010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 64, 141, 421
AcoI YGGCCR 1 cut(s) 138
AcsI RAATTY 4 cut(s) 58, 397, 427, 476
AfaI GTAC 1 cut(s) 381
AfiI CCNNNNNNNGG 2 cut(s) 217, 218
AgsI TTSAA 3 cut(s) 184, 427, 476
AluBI AGCT 3 cut(s) 74, 155, 290
AluI AGCT 3 cut(s) 74, 155, 290
AoxI GGCC 2 cut(s) 138, 489
ApeKI GCWGC 5 cut(s) 143, 152, 239, 290, 293
ApoI RAATTY 4 cut(s) 58, 397, 427, 476
AsuHPI GGTGA 2 cut(s) 84, 290
BbvI GCAGC 5 cut(s) 130, 164, 251, 277, 280
BccI CCATC 1 cut(s) 322
BfaI CTAG 3 cut(s) 297, 404, 493
BfmI CTRYAG 1 cut(s) 150
BisI GCNGC 6 cut(s) 141, 144, 153, 240, 291, 294
BlsI GCNGC 6 cut(s) 142, 145, 154, 241, 292, 295
BmsI GCATC 1 cut(s) 155
BpmI CTGGAG 2 cut(s) 60, 323
Bsc4I CCNNNNNNNGG 2 cut(s) 217, 218
Bse1I ACTGG 2 cut(s) 306, 492
Bse3DI GCAATG 1 cut(s) 280
BseGI GGATG 1 cut(s) 462
BseLI CCNNNNNNNGG 2 cut(s) 217, 218
BseMI GCAATG 1 cut(s) 280
BseMII CTCAG 1 cut(s) 74
BseNI ACTGG 2 cut(s) 306, 492
BseXI GCAGC 5 cut(s) 130, 164, 251, 277, 280
BshFI GGCC 2 cut(s) 140, 491
BslI CCNNNNNNNGG 2 cut(s) 217, 218
BsnI GGCC 2 cut(s) 140, 491
BspACI CCGC 3 cut(s) 64, 141, 421
BspANI GGCC 2 cut(s) 140, 491
BspCNI CTCAG 1 cut(s) 75
BspMAI CTGCAG 1 cut(s) 154
BspQI GCTCTTC 1 cut(s) 30
BsrDI GCAATG 1 cut(s) 280
BsrI ACTGG 2 cut(s) 306, 492
Bst4CI ACNGT 1 cut(s) 176
Bst6I CTCTTC 1 cut(s) 30
BstDEI CTNAG 1 cut(s) 83
BstF5I GGATG 1 cut(s) 462
BstMWI GCNNNNNNNGC 2 cut(s) 149, 152
BstNSI RCATGY 1 cut(s) 386
BstSFI CTRYAG 1 cut(s) 150
BstV1I GCAGC 5 cut(s) 130, 164, 251, 277, 280
BsuRI GGCC 2 cut(s) 140, 491
BtsCI GGATG 1 cut(s) 462
BtsI GCAGTG 1 cut(s) 393
BtsIMutI CAGTG 2 cut(s) 181, 393
Csp6I GTAC 1 cut(s) 380
CviAII CATG 3 cut(s) 20, 229, 383
CviJI RGCY 9 cut(s) 5, 74, 80, 140, 155, 266, 290, 357, 491
CviKI_1 RGCY 9 cut(s) 5, 74, 80, 140, 155, 266, 290, 357, 491
CviQI GTAC 1 cut(s) 380
DdeI CTNAG 1 cut(s) 83
EaeI YGGCCR 1 cut(s) 138
Eam1104I CTCTTC 1 cut(s) 30
EarI CTCTTC 1 cut(s) 30
EciI GGCGGA 1 cut(s) 53
FaeI CATG 3 cut(s) 23, 232, 386
FaiI YATR 9 cut(s) 21, 192, 230, 246, 313, 315, 326, 384, 468
FalI AAGNNNNNCTT 2 cut(s) 341, 373
FatI CATG 3 cut(s) 19, 228, 382
FauNDI CATATG 1 cut(s) 313
Fnu4HI GCNGC 6 cut(s) 141, 144, 153, 240, 291, 294
FokI GGATG 1 cut(s) 469
Fsp4HI GCNGC 6 cut(s) 141, 144, 153, 240, 291, 294
FspBI CTAG 3 cut(s) 297, 404, 493
GluI GCNGC 6 cut(s) 141, 144, 153, 240, 291, 294
GsuI CTGGAG 2 cut(s) 60, 323
HaeIII GGCC 2 cut(s) 140, 491
Hin1II CATG 3 cut(s) 23, 232, 386
HinfI GANTC 2 cut(s) 184, 412
HphI GGTGA 2 cut(s) 84, 290
Hpy166II GTNNAC 1 cut(s) 208
Hpy188I TCNGA 3 cut(s) 107, 172, 411
Hpy8I GTNNAC 1 cut(s) 208
HpyAV CCTTC 1 cut(s) 120
HpyCH4III ACNGT 1 cut(s) 176
HpyCH4V TGCA 5 cut(s) 43, 146, 152, 386, 466
HpyF10VI GCNNNNNNNGC 2 cut(s) 149, 152
HpyF3I CTNAG 1 cut(s) 83
Hsp92II CATG 3 cut(s) 23, 232, 386
LguI GCTCTTC 1 cut(s) 30
LmnI GCTCC 1 cut(s) 79
LpnPI CCDG 6 cut(s) 90, 95, 141, 287, 331, 473
Lsp1109I GCAGC 5 cut(s) 130, 164, 251, 277, 280
LweI GCATC 1 cut(s) 155
MaeI CTAG 3 cut(s) 297, 404, 493
MaeIII GTNAC 1 cut(s) 459
MboII GAAGA 3 cut(s) 17, 296, 361
MnlI CCTC 4 cut(s) 105, 187, 211, 256
MseI TTAA 2 cut(s) 375, 431
MspA1I CMGCKG 2 cut(s) 143, 155
MwoI GCNNNNNNNGC 2 cut(s) 149, 152
NdeI CATATG 1 cut(s) 313
NlaIII CATG 3 cut(s) 23, 232, 386
NspI RCATGY 1 cut(s) 386
PciSI GCTCTTC 1 cut(s) 30
PfeI GAWTC 2 cut(s) 184, 412
PflFI GACNNNGTC 1 cut(s) 230
PkrI GCNGC 6 cut(s) 142, 145, 154, 241, 292, 295
PstI CTGCAG 1 cut(s) 154
PsyI GACNNNGTC 1 cut(s) 230
PvuII CAGCTG 1 cut(s) 155
RsaI GTAC 1 cut(s) 381
RsaNI GTAC 1 cut(s) 380
SapI GCTCTTC 1 cut(s) 30
SaqAI TTAA 2 cut(s) 375, 431
SatI GCNGC 6 cut(s) 141, 144, 153, 240, 291, 294
SetI ASST 6 cut(s) 76, 97, 157, 198, 292, 381
SfaNI GCATC 1 cut(s) 155
SfcI CTRYAG 1 cut(s) 150
SsiI CCGC 3 cut(s) 64, 141, 421
SspMI CTAG 3 cut(s) 297, 404, 493
TaaI ACNGT 1 cut(s) 176
TauI GCSGC 1 cut(s) 143
TfiI GAWTC 2 cut(s) 184, 412
Tru1I TTAA 2 cut(s) 375, 431
Tru9I TTAA 2 cut(s) 375, 431
TscAI CASTG 2 cut(s) 181, 393
TseI GCWGC 5 cut(s) 143, 152, 239, 290, 293
TspDTI ATGAA 1 cut(s) 297
TspGWI ACGGA 1 cut(s) 177
TspRI CASTG 2 cut(s) 181, 393
Tth111I GACNNNGTC 1 cut(s) 230
XapI RAATTY 4 cut(s) 58, 397, 427, 476
XceI RCATGY 1 cut(s) 386
XspI CTAG 3 cut(s) 297, 404, 493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.