Condensin II non structural maintenance of chromosomes subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000014662 |
| rosa_multiflora | Rmu_sc0000659.1_g000046 |
| rosa_roxburghii | Rroxscaffold_7G00208340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 48 |
| AccII | CGCG | 1 cut(s) | 131 |
| AcsI | RAATTY | 1 cut(s) | 226 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 24, 48, 113 |
| AflIII | ACRYGT | 1 cut(s) | 129 |
| AgsI | TTSAA | 2 cut(s) | 56, 164 |
| AluBI | AGCT | 1 cut(s) | 93 |
| AluI | AGCT | 1 cut(s) | 93 |
| Alw26I | GTCTC | 1 cut(s) | 115 |
| Ama87I | CYCGRG | 1 cut(s) | 304 |
| AoxI | GGCC | 1 cut(s) | 262 |
| ApoI | RAATTY | 1 cut(s) | 226 |
| AspS9I | GGNCC | 1 cut(s) | 262 |
| AsuC2I | CCSGG | 2 cut(s) | 115, 156 |
| AsuHPI | GGTGA | 1 cut(s) | 129 |
| AvaI | CYCGRG | 1 cut(s) | 304 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 195, 228 |
| BcnI | CCSGG | 2 cut(s) | 115, 156 |
| BcoDI | GTCTC | 1 cut(s) | 115 |
| Bme1390I | CCNGG | 2 cut(s) | 115, 156 |
| BmeT110I | CYCGRG | 1 cut(s) | 304 |
| BmgT120I | GGNCC | 1 cut(s) | 262 |
| BmiI | GGNNCC | 1 cut(s) | 29 |
| BmrFI | CCNGG | 2 cut(s) | 115, 156 |
| BmsI | GCATC | 2 cut(s) | 84, 127 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 185, 217 |
| BpmI | CTGGAG | 1 cut(s) | 212 |
| Bpu10I | CCTNAGC | 1 cut(s) | 23 |
| BpuMI | CCSGG | 2 cut(s) | 115, 156 |
| BsaBI | GATNNNNATC | 1 cut(s) | 56 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 150, 180 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 24, 48, 113 |
| Bse1I | ACTGG | 1 cut(s) | 213 |
| Bse3DI | GCAATG | 1 cut(s) | 245 |
| Bse8I | GATNNNNATC | 1 cut(s) | 56 |
| BseGI | GGATG | 2 cut(s) | 118, 256 |
| BseJI | GATNNNNATC | 1 cut(s) | 56 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 24, 48, 113 |
| BseMI | GCAATG | 1 cut(s) | 245 |
| BseNI | ACTGG | 1 cut(s) | 213 |
| BseRI | GAGGAG | 1 cut(s) | 82 |
| BseYI | CCCAGC | 1 cut(s) | 4 |
| Bsh1236I | CGCG | 1 cut(s) | 131 |
| BshFI | GGCC | 1 cut(s) | 264 |
| BsiHKCI | CYCGRG | 1 cut(s) | 304 |
| BsiSI | CCGG | 3 cut(s) | 114, 122, 155 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 24, 48, 113 |
| BsmAI | GTCTC | 1 cut(s) | 115 |
| BsnI | GGCC | 1 cut(s) | 264 |
| BsoBI | CYCGRG | 1 cut(s) | 304 |
| BspANI | GGCC | 1 cut(s) | 264 |
| BspFNI | CGCG | 1 cut(s) | 131 |
| BspLI | GGNNCC | 1 cut(s) | 29 |
| BsrDI | GCAATG | 1 cut(s) | 245 |
| BsrI | ACTGG | 1 cut(s) | 213 |
| Bst4CI | ACNGT | 1 cut(s) | 141 |
| Bst6I | CTCTTC | 1 cut(s) | 59 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 81 |
| BstC8I | GCNNGC | 1 cut(s) | 236 |
| BstDEI | CTNAG | 2 cut(s) | 23, 282 |
| BstF5I | GGATG | 2 cut(s) | 118, 256 |
| BstFNI | CGCG | 1 cut(s) | 131 |
| BstMAI | GTCTC | 1 cut(s) | 115 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 81, 90 |
| BstSCI | CCNGG | 2 cut(s) | 113, 154 |
| BstUI | CGCG | 1 cut(s) | 131 |
| BsuRI | GGCC | 1 cut(s) | 264 |
| BtsCI | GGATG | 2 cut(s) | 118, 256 |
| BtsIMutI | CAGTG | 1 cut(s) | 206 |
| Cac8I | GCNNGC | 1 cut(s) | 236 |
| Cfr13I | GGNCC | 1 cut(s) | 262 |
| CviJI | RGCY | 4 cut(s) | 17, 93, 125, 264 |
| CviKI_1 | RGCY | 4 cut(s) | 17, 93, 125, 264 |
| DdeI | CTNAG | 2 cut(s) | 23, 282 |
| Eam1104I | CTCTTC | 1 cut(s) | 59 |
| EarI | CTCTTC | 1 cut(s) | 59 |
| Eco88I | CYCGRG | 1 cut(s) | 304 |
| FaiI | YATR | 3 cut(s) | 47, 49, 344 |
| FauNDI | CATATG | 1 cut(s) | 47 |
| FokI | GGATG | 2 cut(s) | 105, 263 |
| GsaI | CCCAGC | 1 cut(s) | 8 |
| GsuI | CTGGAG | 1 cut(s) | 212 |
| HaeIII | GGCC | 1 cut(s) | 264 |
| HapII | CCGG | 3 cut(s) | 114, 122, 155 |
| HincII | GTYRAC | 1 cut(s) | 258 |
| HindII | GTYRAC | 1 cut(s) | 258 |
| HindIII | AAGCTT | 1 cut(s) | 91 |
| HinfI | GANTC | 5 cut(s) | 52, 99, 194, 200, 269 |
| HpaII | CCGG | 3 cut(s) | 114, 122, 155 |
| HphI | GGTGA | 1 cut(s) | 129 |
| Hpy166II | GTNNAC | 2 cut(s) | 258, 340 |
| Hpy188I | TCNGA | 2 cut(s) | 39, 199 |
| Hpy188III | TCNNGA | 5 cut(s) | 61, 173, 191, 304, 306 |
| Hpy8I | GTNNAC | 2 cut(s) | 258, 340 |
| HpyAV | CCTTC | 1 cut(s) | 241 |
| HpyCH4III | ACNGT | 1 cut(s) | 141 |
| HpyCH4V | TGCA | 1 cut(s) | 224 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 81, 90 |
| HpyF3I | CTNAG | 2 cut(s) | 23, 282 |
| LpnPI | CCDG | 7 cut(s) | 32, 120, 127, 135, 168, 176, 194 |
| LweI | GCATC | 2 cut(s) | 84, 127 |
| MaeIII | GTNAC | 1 cut(s) | 150 |
| MboII | GAAGA | 3 cut(s) | 76, 340, 345 |
| MluCI | AATT | 4 cut(s) | 178, 186, 226, 276 |
| MluI | ACGCGT | 1 cut(s) | 129 |
| MlyI | GAGTC | 2 cut(s) | 194, 203 |
| MmeI | TCCRAC | 2 cut(s) | 123, 177 |
| MnlI | CCTC | 1 cut(s) | 60 |
| MspI | CCGG | 3 cut(s) | 114, 122, 155 |
| MspR9I | CCNGG | 2 cut(s) | 115, 156 |
| MvnI | CGCG | 1 cut(s) | 131 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 81, 90 |
| NciI | CCSGG | 2 cut(s) | 115, 156 |
| NdeI | CATATG | 1 cut(s) | 47 |
| NlaIV | GGNNCC | 1 cut(s) | 29 |
| NmeAIII | GCCGAG | 1 cut(s) | 290 |
| PaeR7I | CTCGAG | 1 cut(s) | 304 |
| PfeI | GAWTC | 3 cut(s) | 52, 99, 269 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 48 |
| PleI | GAGTC | 2 cut(s) | 194, 202 |
| PpsI | GAGTC | 2 cut(s) | 194, 202 |
| PspFI | CCCAGC | 1 cut(s) | 4 |
| PspN4I | GGNNCC | 1 cut(s) | 29 |
| PspPI | GGNCC | 1 cut(s) | 262 |
| Sau96I | GGNCC | 1 cut(s) | 262 |
| SchI | GAGTC | 2 cut(s) | 194, 203 |
| ScrFI | CCNGG | 2 cut(s) | 115, 156 |
| SetI | ASST | 1 cut(s) | 95 |
| SfaNI | GCATC | 2 cut(s) | 84, 127 |
| Sfr274I | CTCGAG | 1 cut(s) | 304 |
| SlaI | CTCGAG | 1 cut(s) | 304 |
| SmlI | CTYRAG | 1 cut(s) | 304 |
| SmoI | CTYRAG | 1 cut(s) | 304 |
| Sse9I | AATT | 4 cut(s) | 178, 186, 226, 276 |
| StyD4I | CCNGG | 2 cut(s) | 113, 154 |
| TaaI | ACNGT | 1 cut(s) | 141 |
| TaqI | TCGA | 2 cut(s) | 203, 305 |
| TasI | AATT | 4 cut(s) | 178, 186, 226, 276 |
| TfiI | GAWTC | 3 cut(s) | 52, 99, 269 |
| TscAI | CASTG | 1 cut(s) | 213 |
| TspRI | CASTG | 1 cut(s) | 213 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 48 |
| XapI | RAATTY | 1 cut(s) | 226 |
| XhoI | CTCGAG | 1 cut(s) | 304 |