Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002307.1_g000015 |
| rosa_samantha | Rh1CG120000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 152 |
| AciI | CCGC | 1 cut(s) | 77 |
| AcsI | RAATTY | 1 cut(s) | 67 |
| AcuI | CTGAAG | 1 cut(s) | 23 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 233, 281 |
| AgsI | TTSAA | 2 cut(s) | 85, 193 |
| AjnI | CCWGG | 1 cut(s) | 226 |
| AluBI | AGCT | 1 cut(s) | 46 |
| AluI | AGCT | 1 cut(s) | 46 |
| AoxI | GGCC | 1 cut(s) | 181 |
| ApeKI | GCWGC | 2 cut(s) | 26, 286 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| AseI | ATTAAT | 1 cut(s) | 132 |
| AspS9I | GGNCC | 2 cut(s) | 181, 236 |
| AsuC2I | CCSGG | 1 cut(s) | 140 |
| AsuHPI | GGTGA | 1 cut(s) | 113 |
| AvaII | GGWCC | 1 cut(s) | 236 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 35, 67 |
| BbvI | GCAGC | 2 cut(s) | 13, 273 |
| BciT130I | CCWGG | 1 cut(s) | 228 |
| BcnI | CCSGG | 1 cut(s) | 140 |
| BisI | GCNGC | 2 cut(s) | 27, 287 |
| BlsI | GCNGC | 2 cut(s) | 28, 288 |
| Bme1390I | CCNGG | 2 cut(s) | 140, 228 |
| Bme18I | GGWCC | 1 cut(s) | 236 |
| BmgT120I | GGNCC | 2 cut(s) | 181, 236 |
| BmrFI | CCNGG | 2 cut(s) | 140, 228 |
| BmrI | ACTGGG | 1 cut(s) | 291 |
| BmsI | GCATC | 2 cut(s) | 64, 112 |
| BmuI | ACTGGG | 1 cut(s) | 291 |
| BpmI | CTGGAG | 1 cut(s) | 153 |
| BpuMI | CCSGG | 1 cut(s) | 140 |
| BsaJI | CCNNGG | 2 cut(s) | 138, 227 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 46, 76 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 233, 281 |
| Bse1I | ACTGG | 2 cut(s) | 239, 286 |
| BseBI | CCWGG | 1 cut(s) | 228 |
| BseDI | CCNNGG | 2 cut(s) | 138, 227 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 233, 281 |
| BseNI | ACTGG | 2 cut(s) | 239, 286 |
| BseXI | GCAGC | 2 cut(s) | 13, 273 |
| Bsh1236I | CGCG | 1 cut(s) | 152 |
| BshFI | GGCC | 1 cut(s) | 183 |
| BsiSI | CCGG | 1 cut(s) | 140 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 233, 281 |
| BsnI | GGCC | 1 cut(s) | 183 |
| Bsp68I | TCGCGA | 1 cut(s) | 152 |
| BspACI | CCGC | 1 cut(s) | 77 |
| BspANI | GGCC | 1 cut(s) | 183 |
| BspFNI | CGCG | 1 cut(s) | 152 |
| BsrI | ACTGG | 2 cut(s) | 239, 286 |
| BssECI | CCNNGG | 2 cut(s) | 138, 227 |
| Bst2UI | CCWGG | 1 cut(s) | 228 |
| Bst4CI | ACNGT | 1 cut(s) | 89 |
| BstC8I | GCNNGC | 2 cut(s) | 10, 185 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 231 |
| BstFNI | CGCG | 1 cut(s) | 152 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 43, 216 |
| BstNI | CCWGG | 1 cut(s) | 228 |
| BstNSI | RCATGY | 1 cut(s) | 12 |
| BstSCI | CCNGG | 2 cut(s) | 138, 226 |
| BstUI | CGCG | 1 cut(s) | 152 |
| BstV1I | GCAGC | 2 cut(s) | 13, 273 |
| BsuRI | GGCC | 1 cut(s) | 183 |
| BtsIMutI | CAGTG | 2 cut(s) | 246, 279 |
| BtuMI | TCGCGA | 1 cut(s) | 152 |
| Cac8I | GCNNGC | 2 cut(s) | 10, 185 |
| Cfr13I | GGNCC | 2 cut(s) | 181, 236 |
| CviAII | CATG | 1 cut(s) | 9 |
| CviJI | RGCY | 3 cut(s) | 46, 183, 286 |
| CviKI_1 | RGCY | 3 cut(s) | 46, 183, 286 |
| DraI | TTTAAA | 1 cut(s) | 117 |
| Eco32I | GATATC | 1 cut(s) | 148 |
| Eco47I | GGWCC | 1 cut(s) | 236 |
| Eco57I | CTGAAG | 1 cut(s) | 23 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 231 |
| EcoRII | CCWGG | 1 cut(s) | 226 |
| EcoRV | GATATC | 1 cut(s) | 148 |
| FaeI | CATG | 1 cut(s) | 12 |
| FaiI | YATR | 2 cut(s) | 10, 221 |
| FatI | CATG | 1 cut(s) | 8 |
| Fnu4HI | GCNGC | 2 cut(s) | 27, 287 |
| Fsp4HI | GCNGC | 2 cut(s) | 27, 287 |
| GluI | GCNGC | 2 cut(s) | 27, 287 |
| GsuI | CTGGAG | 1 cut(s) | 153 |
| HaeIII | GGCC | 1 cut(s) | 183 |
| HapII | CCGG | 1 cut(s) | 140 |
| Hin1II | CATG | 1 cut(s) | 12 |
| HindIII | AAGCTT | 1 cut(s) | 44 |
| HpaII | CCGG | 1 cut(s) | 140 |
| HphI | GGTGA | 1 cut(s) | 113 |
| Hpy188I | TCNGA | 3 cut(s) | 42, 73, 253 |
| Hpy188III | TCNNGA | 2 cut(s) | 151, 170 |
| HpyCH4III | ACNGT | 1 cut(s) | 89 |
| HpyCH4V | TGCA | 3 cut(s) | 8, 12, 219 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 43, 216 |
| Hsp92II | CATG | 1 cut(s) | 12 |
| LpnPI | CCDG | 9 cut(s) | 111, 153, 183, 197, 213, 240, 252, 267, 288 |
| Lsp1109I | GCAGC | 2 cut(s) | 13, 273 |
| LweI | GCATC | 2 cut(s) | 64, 112 |
| MboII | GAAGA | 2 cut(s) | 155, 257 |
| MluCI | AATT | 4 cut(s) | 67, 111, 133, 205 |
| MnlI | CCTC | 3 cut(s) | 72, 177, 227 |
| MseI | TTAA | 3 cut(s) | 116, 132, 204 |
| MspI | CCGG | 1 cut(s) | 140 |
| MspR9I | CCNGG | 2 cut(s) | 140, 228 |
| MvaI | CCWGG | 1 cut(s) | 228 |
| MvnI | CGCG | 1 cut(s) | 152 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 43, 216 |
| NciI | CCSGG | 1 cut(s) | 140 |
| NlaIII | CATG | 1 cut(s) | 12 |
| NruI | TCGCGA | 1 cut(s) | 152 |
| NspI | RCATGY | 1 cut(s) | 12 |
| PaeI | GCATGC | 1 cut(s) | 12 |
| PkrI | GCNGC | 2 cut(s) | 28, 288 |
| PshBI | ATTAAT | 1 cut(s) | 132 |
| Psp6I | CCWGG | 1 cut(s) | 226 |
| PspGI | CCWGG | 1 cut(s) | 226 |
| PspPI | GGNCC | 2 cut(s) | 181, 236 |
| RruI | TCGCGA | 1 cut(s) | 152 |
| SaqAI | TTAA | 3 cut(s) | 116, 132, 204 |
| SatI | GCNGC | 2 cut(s) | 27, 287 |
| Sau96I | GGNCC | 2 cut(s) | 181, 236 |
| ScrFI | CCNGG | 2 cut(s) | 140, 228 |
| SetI | ASST | 4 cut(s) | 48, 169, 229, 238 |
| SfaNI | GCATC | 2 cut(s) | 64, 112 |
| SinI | GGWCC | 1 cut(s) | 236 |
| SphI | GCATGC | 1 cut(s) | 12 |
| Sse9I | AATT | 4 cut(s) | 67, 111, 133, 205 |
| SsiI | CCGC | 1 cut(s) | 77 |
| StyD4I | CCNGG | 2 cut(s) | 138, 226 |
| TaaI | ACNGT | 1 cut(s) | 89 |
| TasI | AATT | 4 cut(s) | 67, 111, 133, 205 |
| Tru1I | TTAA | 3 cut(s) | 116, 132, 204 |
| Tru9I | TTAA | 3 cut(s) | 116, 132, 204 |
| TscAI | CASTG | 2 cut(s) | 246, 286 |
| TseI | GCWGC | 2 cut(s) | 26, 286 |
| TspDTI | ATGAA | 1 cut(s) | 270 |
| TspRI | CASTG | 2 cut(s) | 246, 286 |
| VpaK11BI | GGWCC | 1 cut(s) | 236 |
| VspI | ATTAAT | 1 cut(s) | 132 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 231 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XceI | RCATGY | 1 cut(s) | 12 |