Ripening-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0354521 |
| rosa_multiflora | Rmu_sc0002737.1_g000006 Rmu_sc0007640.1_g000002 |
| rosa_samantha | Rh1AG253900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 129 |
| AfaI | GTAC | 1 cut(s) | 224 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 178 |
| AflIII | ACRYGT | 1 cut(s) | 71 |
| AgsI | TTSAA | 1 cut(s) | 202 |
| AleI | CACNNNNGTG | 1 cut(s) | 173 |
| AluBI | AGCT | 2 cut(s) | 44, 105 |
| AluI | AGCT | 2 cut(s) | 44, 105 |
| Alw21I | GWGCWC | 1 cut(s) | 66 |
| ApeKI | GCWGC | 2 cut(s) | 25, 28 |
| AsuHPI | GGTGA | 2 cut(s) | 58, 131 |
| Bbv12I | GWGCWC | 1 cut(s) | 66 |
| BbvI | GCAGC | 2 cut(s) | 12, 15 |
| BccI | CCATC | 3 cut(s) | 116, 140, 242 |
| BisI | GCNGC | 2 cut(s) | 26, 29 |
| BlsI | GCNGC | 2 cut(s) | 27, 30 |
| BmsI | GCATC | 1 cut(s) | 143 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 178 |
| BseGI | GGATG | 1 cut(s) | 234 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 178 |
| BseRI | GAGGAG | 1 cut(s) | 265 |
| BseXI | GCAGC | 2 cut(s) | 12, 15 |
| BsiHKAI | GWGCWC | 1 cut(s) | 66 |
| BsiSI | CCGG | 1 cut(s) | 22 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 178 |
| Bsp1286I | GDGCHC | 1 cut(s) | 66 |
| BspACI | CCGC | 1 cut(s) | 129 |
| BstC8I | GCNNGC | 1 cut(s) | 42 |
| BstF5I | GGATG | 1 cut(s) | 234 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 37 |
| BstNSI | RCATGY | 1 cut(s) | 75 |
| BstV1I | GCAGC | 2 cut(s) | 12, 15 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 245 |
| BtsCI | GGATG | 1 cut(s) | 234 |
| Cac8I | GCNNGC | 1 cut(s) | 42 |
| CseI | GACGC | 1 cut(s) | 103 |
| Csp6I | GTAC | 1 cut(s) | 223 |
| CviAII | CATG | 2 cut(s) | 72, 239 |
| CviJI | RGCY | 3 cut(s) | 25, 44, 105 |
| CviKI_1 | RGCY | 3 cut(s) | 25, 44, 105 |
| CviQI | GTAC | 1 cut(s) | 223 |
| EciI | GGCGGA | 1 cut(s) | 144 |
| FaeI | CATG | 2 cut(s) | 75, 242 |
| FaiI | YATR | 3 cut(s) | 18, 73, 240 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 28, 60, 74, 106 |
| FatI | CATG | 2 cut(s) | 71, 238 |
| Fnu4HI | GCNGC | 2 cut(s) | 26, 29 |
| FokI | GGATG | 1 cut(s) | 221 |
| Fsp4HI | GCNGC | 2 cut(s) | 26, 29 |
| GluI | GCNGC | 2 cut(s) | 26, 29 |
| HapII | CCGG | 1 cut(s) | 22 |
| HgaI | GACGC | 1 cut(s) | 103 |
| Hin1II | CATG | 2 cut(s) | 75, 242 |
| HincII | GTYRAC | 1 cut(s) | 189 |
| HindII | GTYRAC | 1 cut(s) | 189 |
| HindIII | AAGCTT | 1 cut(s) | 42 |
| HpaII | CCGG | 1 cut(s) | 22 |
| HphI | GGTGA | 2 cut(s) | 58, 131 |
| Hpy166II | GTNNAC | 1 cut(s) | 189 |
| Hpy188I | TCNGA | 3 cut(s) | 111, 139, 163 |
| Hpy8I | GTNNAC | 1 cut(s) | 189 |
| HpyAV | CCTTC | 2 cut(s) | 76, 253 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 31 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 37 |
| Hsp92II | CATG | 2 cut(s) | 75, 242 |
| LmnI | GCTCC | 1 cut(s) | 131 |
| LpnPI | CCDG | 3 cut(s) | 35, 177, 186 |
| Lsp1109I | GCAGC | 2 cut(s) | 12, 15 |
| LweI | GCATC | 1 cut(s) | 143 |
| MaeIII | GTNAC | 1 cut(s) | 76 |
| MhlI | GDGCHC | 1 cut(s) | 66 |
| MnlI | CCTC | 2 cut(s) | 207, 243 |
| MslI | CAYNNNNRTG | 3 cut(s) | 139, 173, 243 |
| MspI | CCGG | 1 cut(s) | 22 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 37 |
| NlaIII | CATG | 2 cut(s) | 75, 242 |
| NspI | RCATGY | 1 cut(s) | 75 |
| OliI | CACNNNNGTG | 1 cut(s) | 173 |
| PciI | ACATGT | 1 cut(s) | 71 |
| PkrI | GCNGC | 2 cut(s) | 27, 30 |
| PscI | ACATGT | 1 cut(s) | 71 |
| RsaI | GTAC | 1 cut(s) | 224 |
| RsaNI | GTAC | 1 cut(s) | 223 |
| RseI | CAYNNNNRTG | 3 cut(s) | 139, 173, 243 |
| SatI | GCNGC | 2 cut(s) | 26, 29 |
| SduI | GDGCHC | 1 cut(s) | 66 |
| SetI | ASST | 6 cut(s) | 46, 92, 107, 118, 218, 270 |
| SfaNI | GCATC | 1 cut(s) | 143 |
| SgeI | CNNG | 9 cut(s) | 34, 53, 71, 84, 103, 185, 204, 223, 251 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 139, 173, 243 |
| SsiI | CCGC | 1 cut(s) | 129 |
| TatI | WGTACW | 1 cut(s) | 222 |
| TseI | GCWGC | 2 cut(s) | 25, 28 |
| XceI | RCATGY | 1 cut(s) | 75 |