Rmu_sc0002927.1_g000053

Cytosolic purine

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002927.1
OG0031088
Physical Location & Seq
Forward (+)
183712 .. 184325
614 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002927.1_g000053.1.cds

Sequence Viewer

Length: 561 bp
atgggtcgtgccggtcgtccagagagttctagggcgagggaggaggtcgccgctcaaaataggcgcgaggagaggttagcgaacaatagcgccattagcggttctgctgacgagggagagactggtggtggagaaatagagtctgcctgggtgtttagcgacggtactgccgtggatgaaccaggagggcccatgactgtggccgtcgtccaacgtatgaagcggcggttcttccgcctacctagagtggtgaagctgcgtctgccgaccaccgaggaaaaaacttccattctgccagcggggtatgcggcagtgcatgaggccatcttccgccaaggtgtcaccttgccgctactccccaacctccagatcctgttatgcgagtttggcgtcgcctttaggcaggtttgcaccaatctgtggcgtctgctgatggcgctcaactcgctatggcgcttgtctggctacgagggtccaactgtggcggaggtgctgtacttctacgagtttgtgtacgtgaggcgccaaggttgcagcaggcaggtgaatttcagcgcctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
5_nucleotid

Protein Analysis

186

Amino Acids

20.74

Weight (kDa)

8.93

Isoelectric Point (pI)

53.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0031088)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0000673.1_g000011 Rmu_sc0002927.1_g000053

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 532
Acc36I ACCTGC 2 cut(s) 394, 532
AccB1I GGYRCC 1 cut(s) 522
AccB7I CCANNNNNTGG 1 cut(s) 420
AccBSI CCGCTC 1 cut(s) 53
AccII CGCG 1 cut(s) 66
AclWI GGATC 1 cut(s) 364
AcoI YGGCCR 1 cut(s) 201
AcsI RAATTY 1 cut(s) 547
AcyI GRCGYC 3 cut(s) 390, 424, 523
AfaI GTAC 3 cut(s) 166, 497, 515
AfiI CCNNNNNNNGG 1 cut(s) 420
AjnI CCWGG 2 cut(s) 146, 181
AluBI AGCT 1 cut(s) 256
AluI AGCT 1 cut(s) 256
Alw26I GTCTC 1 cut(s) 113
AlwI GGATC 1 cut(s) 364
AlwNI CAGNNNCTG 1 cut(s) 373
AoxI GGCC 3 cut(s) 188, 201, 321
ApaI GGGCCC 1 cut(s) 192
ApeKI GCWGC 2 cut(s) 256, 534
ApoI RAATTY 1 cut(s) 547
AspLEI GCGC 6 cut(s) 66, 92, 439, 456, 525, 557
AspS9I GGNCC 3 cut(s) 188, 189, 473
AsuHPI GGTGA 3 cut(s) 262, 334, 556
AvaII GGWCC 1 cut(s) 473
BaeGI GKGCMC 1 cut(s) 192
BaeI ACNNNNGTAYC 2 cut(s) 156, 189
BanI GGYRCC 1 cut(s) 522
BanII GRGCYC 1 cut(s) 192
BbvI GCAGC 2 cut(s) 243, 546
BccI CCATC 2 cut(s) 332, 427
BceAI ACGGC 2 cut(s) 155, 188
BcgI CGANNNNNNTGC 2 cut(s) 149, 183
BciT130I CCWGG 2 cut(s) 148, 183
BcoDI GTCTC 1 cut(s) 113
BfaI CTAG 2 cut(s) 30, 243
BfoI RGCGCY 5 cut(s) 93, 440, 457, 526, 558
BfuAI ACCTGC 2 cut(s) 394, 532
BisI GCNGC 6 cut(s) 51, 224, 257, 309, 350, 535
BlsI GCNGC 6 cut(s) 52, 225, 258, 310, 351, 536
Bme1390I CCNGG 2 cut(s) 148, 183
Bme18I GGWCC 1 cut(s) 473
BmgT120I GGNCC 3 cut(s) 188, 189, 473
BmiI GGNNCC 3 cut(s) 190, 474, 524
BmrFI CCNGG 2 cut(s) 148, 183
BpmI CTGGAG 1 cut(s) 350
BsaAI YACGTR 1 cut(s) 517
BsaHI GRCGYC 3 cut(s) 390, 424, 523
BsaJI CCNNGG 5 cut(s) 147, 171, 273, 334, 526
BsaXI ACNNNNNCTCC 2 cut(s) 479, 509
Bsc4I CCNNNNNNNGG 1 cut(s) 420
Bse118I RCCGGY 1 cut(s) 11
Bse1I ACTGG 1 cut(s) 127
BseBI CCWGG 2 cut(s) 148, 183
BseDI CCNNGG 5 cut(s) 147, 171, 273, 334, 526
BseGI GGATG 1 cut(s) 181
BseLI CCNNNNNNNGG 1 cut(s) 420
BseNI ACTGG 1 cut(s) 127
BseRI GAGGAG 2 cut(s) 56, 83
BseSI GKGCMC 1 cut(s) 192
BseXI GCAGC 2 cut(s) 243, 546
Bsh1236I CGCG 1 cut(s) 66
Bsh1285I CGRYCG 1 cut(s) 16
BshFI GGCC 3 cut(s) 190, 203, 323
BshNI GGYRCC 1 cut(s) 522
BsiEI CGRYCG 1 cut(s) 16
BsiSI CCGG 1 cut(s) 12
BslI CCNNNNNNNGG 1 cut(s) 420
BsmAI GTCTC 1 cut(s) 113
BsnI GGCC 3 cut(s) 190, 203, 323
Bsp120I GGGCCC 1 cut(s) 188
Bsp1286I GDGCHC 1 cut(s) 192
Bsp143I GATC 1 cut(s) 369
BspANI GGCC 3 cut(s) 190, 203, 323
BspFNI CGCG 1 cut(s) 66
BspLI GGNNCC 3 cut(s) 190, 474, 524
BspMI ACCTGC 2 cut(s) 394, 532
BspPI GGATC 1 cut(s) 364
BspT107I GGYRCC 1 cut(s) 522
BsrBI CCGCTC 1 cut(s) 53
BsrFI RCCGGY 1 cut(s) 11
BsrI ACTGG 1 cut(s) 127
BssAI RCCGGY 1 cut(s) 11
BssECI CCNNGG 5 cut(s) 147, 171, 273, 334, 526
BssMI GATC 1 cut(s) 369
BssNI GRCGYC 3 cut(s) 390, 424, 523
BssT1I CCWWGG 2 cut(s) 334, 526
Bst2UI CCWGG 2 cut(s) 148, 183
Bst4CI ACNGT 3 cut(s) 164, 199, 481
BstACI GRCGYC 3 cut(s) 390, 424, 523
BstBAI YACGTR 1 cut(s) 517
BstC8I GCNNGC 2 cut(s) 297, 539
BstDSI CCRYGG 1 cut(s) 171
BstF5I GGATG 1 cut(s) 181
BstFNI CGCG 1 cut(s) 66
BstH2I RGCGCY 5 cut(s) 93, 440, 457, 526, 558
BstHHI GCGC 6 cut(s) 66, 92, 439, 456, 525, 557
BstKTI GATC 1 cut(s) 372
BstMAI GTCTC 1 cut(s) 113
BstMBI GATC 1 cut(s) 369
BstMCI CGRYCG 1 cut(s) 16
BstMWI GCNNNNNNNGC 8 cut(s) 96, 262, 305, 387, 436, 445, 462, 531
BstNI CCWGG 2 cut(s) 148, 183
BstSCI CCNGG 2 cut(s) 146, 181
BstSLI GKGCMC 1 cut(s) 192
BstUI CGCG 1 cut(s) 66
BstV1I GCAGC 2 cut(s) 243, 546
BstX2I RGATCY 1 cut(s) 369
BstXI CCANNNNNNTGG 1 cut(s) 199
BstYI RGATCY 1 cut(s) 369
BsuRI GGCC 3 cut(s) 190, 203, 323
BtgI CCRYGG 1 cut(s) 171
BtsCI GGATG 1 cut(s) 181
BtsI GCAGTG 1 cut(s) 318
BtsIMutI CAGTG 1 cut(s) 318
BveI ACCTGC 2 cut(s) 394, 532
Cac8I GCNNGC 2 cut(s) 297, 539
CaiI CAGNNNCTG 1 cut(s) 373
CfoI GCGC 6 cut(s) 66, 92, 439, 456, 525, 557
Cfr10I RCCGGY 1 cut(s) 11
Cfr13I GGNCC 3 cut(s) 188, 189, 473
CseI GACGC 3 cut(s) 248, 379, 413
Csp6I GTAC 3 cut(s) 165, 496, 514
CviAII CATG 2 cut(s) 193, 317
CviJI RGCY 5 cut(s) 190, 203, 256, 323, 465
CviKI_1 RGCY 5 cut(s) 190, 203, 256, 323, 465
CviQI GTAC 3 cut(s) 165, 496, 514
DinI GGCGCC 1 cut(s) 524
DpnI GATC 1 cut(s) 371
DpnII GATC 1 cut(s) 369
EaeI YGGCCR 1 cut(s) 201
EciI GGCGGA 3 cut(s) 224, 320, 500
Eco130I CCWWGG 2 cut(s) 334, 526
Eco24I GRGCYC 1 cut(s) 192
Eco47I GGWCC 1 cut(s) 473
EcoO109I RGGNCCY 1 cut(s) 188
EcoRII CCWGG 2 cut(s) 146, 181
EcoT14I CCWWGG 2 cut(s) 334, 526
EcoT38I GRGCYC 1 cut(s) 192
EgeI GGCGCC 1 cut(s) 524
EheI GGCGCC 1 cut(s) 524
ErhI CCWWGG 2 cut(s) 334, 526
FaeI CATG 2 cut(s) 196, 320
FaiI YATR 6 cut(s) 194, 218, 306, 318, 379, 451
FatI CATG 2 cut(s) 192, 316
FauI CCCGC 1 cut(s) 292
Fnu4HI GCNGC 6 cut(s) 51, 224, 257, 309, 350, 535
FokI GGATG 1 cut(s) 188
FriOI GRGCYC 1 cut(s) 192
Fsp4HI GCNGC 6 cut(s) 51, 224, 257, 309, 350, 535
FspBI CTAG 2 cut(s) 30, 243
GlaI GCGC 6 cut(s) 65, 91, 438, 455, 524, 556
GluI GCNGC 6 cut(s) 51, 224, 257, 309, 350, 535
GsuI CTGGAG 1 cut(s) 350
HaeII RGCGCY 5 cut(s) 93, 440, 457, 526, 558
HaeIII GGCC 3 cut(s) 190, 203, 323
HapII CCGG 1 cut(s) 12
HgaI GACGC 3 cut(s) 248, 379, 413
HhaI GCGC 6 cut(s) 66, 92, 439, 456, 525, 557
Hin1I GRCGYC 3 cut(s) 390, 424, 523
Hin1II CATG 2 cut(s) 196, 320
Hin6I GCGC 6 cut(s) 64, 90, 437, 454, 523, 555
HinP1I GCGC 6 cut(s) 64, 90, 437, 454, 523, 555
HinfI GANTC 1 cut(s) 140
HpaII CCGG 1 cut(s) 12
HphI GGTGA 3 cut(s) 262, 334, 556
Hpy166II GTNNAC 1 cut(s) 514
Hpy188III TCNNGA 2 cut(s) 20, 367
Hpy8I GTNNAC 1 cut(s) 514
Hpy99I CGWCG 3 cut(s) 164, 209, 395
HpyCH4III ACNGT 3 cut(s) 164, 199, 481
HpyCH4IV ACGT 2 cut(s) 214, 516
HpyCH4V TGCA 3 cut(s) 316, 411, 534
HpyF10VI GCNNNNNNNGC 8 cut(s) 96, 262, 305, 387, 436, 445, 462, 531
HpySE526I ACGT 2 cut(s) 214, 516
Hsp92I GRCGYC 3 cut(s) 390, 424, 523
Hsp92II CATG 2 cut(s) 196, 320
HspAI GCGC 6 cut(s) 64, 90, 437, 454, 523, 555
KasI GGCGCC 1 cut(s) 522
Kzo9I GATC 1 cut(s) 369
Lsp1109I GCAGC 2 cut(s) 243, 546
MaeI CTAG 2 cut(s) 30, 243
MaeII ACGT 2 cut(s) 214, 516
MaeIII GTNAC 1 cut(s) 340
MalI GATC 1 cut(s) 371
MbiI CCGCTC 1 cut(s) 53
MboI GATC 1 cut(s) 369
MboII GAAGA 2 cut(s) 223, 319
MflI RGATCY 1 cut(s) 369
MhlI GDGCHC 1 cut(s) 192
MluCI AATT 1 cut(s) 547
Mly113I GGCGCC 1 cut(s) 523
MlyI GAGTC 1 cut(s) 149
MmeI TCCRAC 2 cut(s) 235, 500
MslI CAYNNNNRTG 1 cut(s) 197
MspA1I CMGCKG 1 cut(s) 299
MspI CCGG 1 cut(s) 12
MspR9I CCNGG 2 cut(s) 148, 183
MvaI CCWGG 2 cut(s) 148, 183
MvnI CGCG 1 cut(s) 66
MwoI GCNNNNNNNGC 8 cut(s) 96, 262, 305, 387, 436, 445, 462, 531
NarI GGCGCC 1 cut(s) 523
NdeII GATC 1 cut(s) 369
NlaIII CATG 2 cut(s) 196, 320
NlaIV GGNNCC 3 cut(s) 190, 474, 524
NmuCI GTSAC 1 cut(s) 340
PaqCI CACCTGC 1 cut(s) 532
PcsI WCGNNNNNNNCGW 2 cut(s) 13, 168
PflMI CCANNNNNTGG 1 cut(s) 420
PkrI GCNGC 6 cut(s) 52, 225, 258, 310, 351, 536
PleI GAGTC 1 cut(s) 148
PluTI GGCGCC 1 cut(s) 526
PpsI GAGTC 1 cut(s) 148
Ppu21I YACGTR 1 cut(s) 517
Psp6I CCWGG 2 cut(s) 146, 181
PspGI CCWGG 2 cut(s) 146, 181
PspN4I GGNNCC 3 cut(s) 190, 474, 524
PspOMI GGGCCC 1 cut(s) 188
PspPI GGNCC 3 cut(s) 188, 189, 473
PstNI CAGNNNCTG 1 cut(s) 373
PsuI RGATCY 1 cut(s) 369
RsaI GTAC 3 cut(s) 166, 497, 515
RsaNI GTAC 3 cut(s) 165, 496, 514
RseI CAYNNNNRTG 1 cut(s) 197
SatI GCNGC 6 cut(s) 51, 224, 257, 309, 350, 535
Sau3AI GATC 1 cut(s) 369
Sau96I GGNCC 3 cut(s) 188, 189, 473
SchI GAGTC 1 cut(s) 149
ScrFI CCNGG 2 cut(s) 148, 183
SduI GDGCHC 1 cut(s) 192
SfoI GGCGCC 1 cut(s) 524
SinI GGWCC 1 cut(s) 473
SmiMI CAYNNNNRTG 1 cut(s) 197
Sse9I AATT 1 cut(s) 547
SspDI GGCGCC 1 cut(s) 522
SspMI CTAG 2 cut(s) 30, 243
StyD4I CCNGG 2 cut(s) 146, 181
StyI CCWWGG 2 cut(s) 334, 526
TaaI ACNGT 3 cut(s) 164, 199, 481
TaiI ACGT 2 cut(s) 217, 519
TasI AATT 1 cut(s) 547
TatI WGTACW 1 cut(s) 495
TauI GCSGC 4 cut(s) 53, 226, 311, 352
TscAI CASTG 1 cut(s) 318
TseFI GTSAC 1 cut(s) 340
TseI GCWGC 2 cut(s) 256, 534
Tsp45I GTSAC 1 cut(s) 340
TspDTI ATGAA 2 cut(s) 192, 233
TspRI CASTG 1 cut(s) 318
Van91I CCANNNNNTGG 1 cut(s) 420
VpaK11BI GGWCC 1 cut(s) 473
XapI RAATTY 1 cut(s) 547
XspI CTAG 2 cut(s) 30, 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.