Plant transposon protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002936.1_g000002 Rmu_sc0009208.1_g000028 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 241 |
| AcsI | RAATTY | 1 cut(s) | 200 |
| AcuI | CTGAAG | 1 cut(s) | 81 |
| AfaI | GTAC | 2 cut(s) | 22, 28 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 277 |
| AflIII | ACRYGT | 1 cut(s) | 23 |
| AgsI | TTSAA | 1 cut(s) | 238 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 59 |
| ApoI | RAATTY | 1 cut(s) | 200 |
| AsuC2I | CCSGG | 1 cut(s) | 105 |
| BccI | CCATC | 4 cut(s) | 81, 151, 301, 332 |
| BcnI | CCSGG | 1 cut(s) | 105 |
| BfaI | CTAG | 1 cut(s) | 249 |
| BfmI | CTRYAG | 1 cut(s) | 214 |
| Bme1390I | CCNGG | 1 cut(s) | 105 |
| BmrFI | CCNGG | 1 cut(s) | 105 |
| BmsI | GCATC | 2 cut(s) | 122, 252 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 82, 114 |
| BpmI | CTGGAG | 1 cut(s) | 354 |
| BpuMI | CCSGG | 1 cut(s) | 105 |
| BsaJI | CCNNGG | 1 cut(s) | 104 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 365 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 277 |
| Bse1I | ACTGG | 1 cut(s) | 182 |
| BseDI | CCNNGG | 1 cut(s) | 104 |
| BseGI | GGATG | 2 cut(s) | 225, 312 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 277 |
| BseMII | CTCAG | 1 cut(s) | 285 |
| BseNI | ACTGG | 1 cut(s) | 182 |
| BseYI | CCCAGC | 1 cut(s) | 275 |
| Bsh1285I | CGRYCG | 1 cut(s) | 104 |
| BsiEI | CGRYCG | 1 cut(s) | 104 |
| BsiSI | CCGG | 2 cut(s) | 104, 384 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 277 |
| Bsp1407I | TGTACA | 1 cut(s) | 20 |
| Bsp143I | GATC | 2 cut(s) | 6, 45 |
| BspACI | CCGC | 1 cut(s) | 241 |
| BspCNI | CTCAG | 1 cut(s) | 286 |
| BspHI | TCATGA | 1 cut(s) | 9 |
| BsrGI | TGTACA | 1 cut(s) | 20 |
| BsrI | ACTGG | 1 cut(s) | 182 |
| BssECI | CCNNGG | 1 cut(s) | 104 |
| BssMI | GATC | 2 cut(s) | 6, 45 |
| Bst6I | CTCTTC | 1 cut(s) | 8 |
| BstAUI | TGTACA | 1 cut(s) | 20 |
| BstC8I | GCNNGC | 1 cut(s) | 111 |
| BstDEI | CTNAG | 1 cut(s) | 294 |
| BstF5I | GGATG | 2 cut(s) | 225, 312 |
| BstKTI | GATC | 2 cut(s) | 9, 48 |
| BstMBI | GATC | 2 cut(s) | 6, 45 |
| BstMCI | CGRYCG | 1 cut(s) | 104 |
| BstNSI | RCATGY | 1 cut(s) | 27 |
| BstSCI | CCNGG | 1 cut(s) | 103 |
| BstSFI | CTRYAG | 1 cut(s) | 214 |
| BtsCI | GGATG | 2 cut(s) | 225, 312 |
| BtsIMutI | CAGTG | 1 cut(s) | 196 |
| Cac8I | GCNNGC | 1 cut(s) | 111 |
| CaiI | CAGNNNCTG | 1 cut(s) | 59 |
| CciI | TCATGA | 1 cut(s) | 9 |
| Csp6I | GTAC | 2 cut(s) | 21, 27 |
| CviAII | CATG | 3 cut(s) | 10, 24, 154 |
| CviJI | RGCY | 2 cut(s) | 332, 387 |
| CviKI_1 | RGCY | 2 cut(s) | 332, 387 |
| CviQI | GTAC | 2 cut(s) | 21, 27 |
| DdeI | CTNAG | 1 cut(s) | 294 |
| DpnI | GATC | 2 cut(s) | 8, 47 |
| DpnII | GATC | 2 cut(s) | 6, 45 |
| Eam1104I | CTCTTC | 1 cut(s) | 8 |
| EarI | CTCTTC | 1 cut(s) | 8 |
| Eco57I | CTGAAG | 1 cut(s) | 81 |
| EcoRI | GAATTC | 1 cut(s) | 200 |
| FaeI | CATG | 3 cut(s) | 13, 27, 157 |
| FaiI | YATR | 4 cut(s) | 11, 25, 155, 267 |
| FatI | CATG | 3 cut(s) | 9, 23, 153 |
| FokI | GGATG | 2 cut(s) | 232, 319 |
| FspBI | CTAG | 1 cut(s) | 249 |
| GsaI | CCCAGC | 1 cut(s) | 279 |
| GsuI | CTGGAG | 1 cut(s) | 354 |
| HapII | CCGG | 2 cut(s) | 104, 384 |
| Hin1II | CATG | 3 cut(s) | 13, 27, 157 |
| HinfI | GANTC | 4 cut(s) | 68, 137, 223, 374 |
| HpaII | CCGG | 2 cut(s) | 104, 384 |
| Hpy188I | TCNGA | 2 cut(s) | 295, 336 |
| Hpy188III | TCNNGA | 4 cut(s) | 10, 99, 205, 371 |
| HpyCH4V | TGCA | 2 cut(s) | 38, 113 |
| HpyF3I | CTNAG | 1 cut(s) | 294 |
| Hsp92II | CATG | 3 cut(s) | 13, 27, 157 |
| Kzo9I | GATC | 2 cut(s) | 6, 45 |
| LpnPI | CCDG | 6 cut(s) | 117, 195, 202, 218, 261, 384 |
| LweI | GCATC | 2 cut(s) | 122, 252 |
| MaeI | CTAG | 1 cut(s) | 249 |
| MaeIII | GTNAC | 2 cut(s) | 224, 251 |
| MalI | GATC | 2 cut(s) | 8, 47 |
| MboI | GATC | 2 cut(s) | 6, 45 |
| MboII | GAAGA | 4 cut(s) | 16, 25, 63, 173 |
| MluCI | AATT | 1 cut(s) | 200 |
| MlyI | GAGTC | 2 cut(s) | 232, 368 |
| MmeI | TCCRAC | 1 cut(s) | 284 |
| MnlI | CCTC | 6 cut(s) | 84, 85, 322, 331, 344, 378 |
| MspI | CCGG | 2 cut(s) | 104, 384 |
| MspR9I | CCNGG | 1 cut(s) | 105 |
| NciI | CCSGG | 1 cut(s) | 105 |
| NdeII | GATC | 2 cut(s) | 6, 45 |
| NlaIII | CATG | 3 cut(s) | 13, 27, 157 |
| NmuCI | GTSAC | 1 cut(s) | 224 |
| NspI | RCATGY | 1 cut(s) | 27 |
| PagI | TCATGA | 1 cut(s) | 9 |
| PciI | ACATGT | 1 cut(s) | 23 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 106 |
| PfeI | GAWTC | 2 cut(s) | 68, 137 |
| PleI | GAGTC | 2 cut(s) | 231, 368 |
| PpsI | GAGTC | 2 cut(s) | 231, 368 |
| PscI | ACATGT | 1 cut(s) | 23 |
| PspFI | CCCAGC | 1 cut(s) | 275 |
| PstNI | CAGNNNCTG | 1 cut(s) | 59 |
| RsaI | GTAC | 2 cut(s) | 22, 28 |
| RsaNI | GTAC | 2 cut(s) | 21, 27 |
| Sau3AI | GATC | 2 cut(s) | 6, 45 |
| SchI | GAGTC | 2 cut(s) | 232, 368 |
| ScrFI | CCNGG | 1 cut(s) | 105 |
| SetI | ASST | 4 cut(s) | 258, 273, 323, 370 |
| SfaNI | GCATC | 2 cut(s) | 122, 252 |
| SfcI | CTRYAG | 1 cut(s) | 214 |
| Sse9I | AATT | 1 cut(s) | 200 |
| SsiI | CCGC | 1 cut(s) | 241 |
| SspMI | CTAG | 1 cut(s) | 249 |
| StyD4I | CCNGG | 1 cut(s) | 103 |
| TaqI | TCGA | 3 cut(s) | 100, 116, 327 |
| TasI | AATT | 1 cut(s) | 200 |
| TatI | WGTACW | 1 cut(s) | 20 |
| TfiI | GAWTC | 2 cut(s) | 68, 137 |
| TscAI | CASTG | 1 cut(s) | 196 |
| TseFI | GTSAC | 1 cut(s) | 224 |
| Tsp45I | GTSAC | 1 cut(s) | 224 |
| TspDTI | ATGAA | 2 cut(s) | 17, 26 |
| TspRI | CASTG | 1 cut(s) | 196 |
| XapI | RAATTY | 1 cut(s) | 200 |
| XceI | RCATGY | 1 cut(s) | 27 |
| XspI | CTAG | 1 cut(s) | 249 |