Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003351.1

Orthogroup ID

OG0023098

Physical Location & Seq

Genomic Coordinates Reverse (-)

30816 .. 34374

Gene Structure 3559 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

atggccccagaccactcctacgcccagaccaccacagttgattacaccattaacaacccatttgctgcccagtttgtgcgctcttgcgcaaattacagagcccgtgcttcttcgatcaatcgagttttatggacaccttctgggaggcgtcttatcacaggctctcaaaacggggagttcactctctggaatggtgagtcattcaaacatgaattgaggattcagggtcatgatcacgcaatcaggtccatggcgtggagttttgatgatcaagattggatctctggtgatgatgggggcacaatcaggtattggaagagtaacatgattaatgtgctagtcaatgaatctgctcaccatgaatcggttcgggacctgagcttctgtcggactaatttgaagttttgttcatgttccgatgatactacggttaaaatctgggattttgaacggtgccaacaggagaagacattgaccggccatggttggaatgtgacgagtgttgactggcaccccacaaactctctgatagcttcgggtgggtgggacagtgttgtcaaactgtgggatgctaggtcagggagagaactctgttctttttatgatcacaaaaattgggtgcattctgtcaagtggaaccgaaatggtaactggctgctgactgcttccaaggatcaagtcattaagctttacgacttgagggctatgaaggaacttagatctttccgcggccatcagaacaaagtgactgctctagcttggcatcctcttaccgaagattattttgtcagtgggagtagtgatggatccattttccattggcttgttgggcatcatactccccaggttgaaattcctaatgcacacactagcagttacaataataatagtgtgtgggatctccagtggcatcctattggtcatatgatttgtagtggtagcaatgatcgcaccaccaagttttgtcgctcctcgtacactggatgctcaatctgcagcagcaaagaaattgagaagcctctgtcagtttctgatttggtcgcgattgataaaacaagaaatgaagagtcccttataactctgcgctggagatcaagaacaggtgataatgtttctgatgagctagaggaaagaaatacaactgggcttgatttaagcaagaaggagaaagcccggctctccggatcaccttttgtttacttcagccctttcactacagaaatttgggcccatttgaacttcctcgcaatgcgaagcccatctcaagtcacagggcccaaccgcaaagctcagcacgacaactgctcaaatcagcggacactattaaattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

WD40

Protein Analysis

443

Amino Acids

50.66

Weight (kDa)

7.66

Isoelectric Point (pI)

38.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	3 - 130	4.2e-10	WDR5 beta-propeller domain
WD40_Gbeta	PF25391	27 - 242	3.1e-20	G protein beta WD-40 repeat protein
Beta-prop_EML_2	PF23414	28 - 116	3e-06	Echinoderm microtubule-associated protein second beta-propeller
WD40_CDC20-Fz	PF24807	30 - 197	4e-21	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	33 - 184	6.6e-22	WDR3 first beta-propeller domain
Beta-prop_IFT140_1st	PF23383	35 - 121	3.6e-09	IFT140 first beta-propeller
Beta-prop_EIPR1	PF23609	36 - 189	1.2e-06	EIPR1 beta-propeller
Beta-prop_THOC3	PF25174	37 - 107	3.2e-08	THOC3 beta-propeller domain
WD40_Prp19	PF24814	39 - 241	2.3e-30	Prp19 WD40 domain
EIF3I	PF24805	70 - 158	4.3e-08	EIF3I
WD40_MABP1-WDR62_2nd	PF24782	79 - 248	5.6e-12	MABP1/WDR62 second WD40 domain
Beta-prop_TEP1_2nd	PF25047	83 - 274	7.9e-16	TEP-1 second beta-propeller
Beta-prop_WDR5	PF25175	101 - 239	2.2e-30	WDR5 beta-propeller domain
WDR55	PF24796	111 - 275	5.6e-17	WDR55
Beta-prop_WDR36-Utp21_2nd	PF25168	115 - 274	2.2e-17	WDR36/Utp21 second beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	118 - 179	5.3e-07	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	118 - 190	3.5e-09	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	119 - 197	2.7e-17	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	121 - 197	1.5e-10	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	131 - 276	1e-20	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd	PF23393	134 - 222	1.3e-07	WDR90/POC16, second beta-propeller
Beta-prop_SCAP	PF24017	136 - 232	2.6e-06	SCAP Beta-propeller
WD40	PF00400	153 - 190	7.7e-11	WD domain, G-beta repeat
Beta-prop_WDR3_1st	PF25173	154 - 320	3.1e-25	WDR3 first beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	155 - 237	1e-10	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	157 - 274	1.3e-12	WDR3 second beta-propeller domain
Beta-prop_EML	PF23409	159 - 264	7e-08	Echinoderm microtubule-associated protein first beta-propeller
EIF3I	PF24805	164 - 244	6.3e-09	EIF3I
WD40_MABP1-WDR62_2nd	PF24782	168 - 320	6.2e-06	MABP1/WDR62 second WD40 domain
WD40_CDC20-Fz	PF24807	185 - 321	1.9e-20	CDC20/Fizzy WD40 domain
Beta-prop_WDR36-Utp21_1st	PF25171	185 - 316	3e-07	WDR36/Utp21 first beta-propeller
WD40	PF00400	195 - 232	9.1e-08	WD domain, G-beta repeat
Beta-prop_WDR3_2nd	PF25172	197 - 321	4e-09	WDR3 second beta-propeller domain
Beta-prop_WDR5	PF25175	200 - 328	5.2e-17	WDR5 beta-propeller domain
Beta-prop_DCAF4	PF23761	202 - 262	5.5e-06	DDB1- and CUL4-associated factor 4 beta-propeller domain
Beta-prop_THOC3	PF25174	203 - 323	2.5e-22	THOC3 beta-propeller domain
Beta-prop_Aladin	PF25460	206 - 318	3.4e-06	Aladin seven-bladed propeller
WD40_WDHD1_1st	PF24817	207 - 343	8.5e-14	WDHD1 first WD40 domain
WD40	PF00400	237 - 274	8.4e-06	WD domain, G-beta repeat
WD40_Prp19	PF24814	239 - 323	5e-09	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0023098)

Species	Orthologous Gene IDs
rosa_multiflora	Rmu_sc0003351.1_g000010
rosa_roxburghii	Rroxscaffold_3G00243380 Rroxscaffold_3G00243420 Rroxscaffold_3G00243450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1076
AasI	GACNNNNNNGTC	1 cut(s)	554
Acc16I	TGCGCA	1 cut(s)	88
AccB1I	GGYRCC	2 cut(s)	453, 510
AccB7I	CCANNNNNTGG	1 cut(s)	255
AccII	CGCG	2 cut(s)	729, 1043
AccIII	TCCGGA	1 cut(s)	1181
AciI	CCGC	4 cut(s)	727, 729, 1282, 1315
AclWI	GGATC	6 cut(s)	287, 681, 801, 814, 906, 1192
AcoI	YGGCCR	2 cut(s)	478, 730
AcsI	RAATTY	2 cut(s)	852, 1221
AcuI	CTGAAG	1 cut(s)	1186
AcyI	GRCGYC	1 cut(s)	148
AfaI	GTAC	1 cut(s)	977
AfiI	CCNNNNNNNGG	2 cut(s)	255, 364
AgsI	TTSAA	5 cut(s)	205, 400, 449, 851, 1237
AjnI	CCWGG	1 cut(s)	843
AluBI	AGCT	6 cut(s)	381, 533, 688, 758, 1123, 1289
AluI	AGCT	6 cut(s)	381, 533, 688, 758, 1123, 1289
AlwI	GGATC	6 cut(s)	287, 681, 801, 814, 906, 1192
AlwNI	CAGNNNCTG	1 cut(s)	1031
Aor13HI	TCCGGA	1 cut(s)	1181
AoxI	GGCC	5 cut(s)	3, 478, 730, 1227, 1274
ApaI	GGGCCC	2 cut(s)	1231, 1278
ApeKI	GCWGC	4 cut(s)	65, 655, 996, 999
ApoI	RAATTY	2 cut(s)	852, 1221
AseI	ATTAAT	1 cut(s)	330
Asp700I	GAANNNNTTC	1 cut(s)	366
AspLEI	GCGC	3 cut(s)	81, 89, 1086
AspS9I	GGNCC	7 cut(s)	4, 246, 373, 1227, 1228, 1274, 1275
AsuC2I	CCSGG	1 cut(s)	1174
AsuHPI	GGTGA	5 cut(s)	206, 299, 347, 1115, 1179
AvaII	GGWCC	2 cut(s)	246, 373
BaeGI	GKGCMC	3 cut(s)	302, 1231, 1278
BaeI	ACNNNNGTAYC	2 cut(s)	414, 447
BamHI	GGATCC	1 cut(s)	806
BanI	GGYRCC	2 cut(s)	453, 510
BanII	GRGCYC	3 cut(s)	103, 1231, 1278
BbsI	GAAGAC	1 cut(s)	473
BbvI	GCAGC	4 cut(s)	52, 642, 1008, 1011
BccI	CCATC	4 cut(s)	287, 741, 797, 1267
BciT130I	CCWGG	1 cut(s)	845
BclI	TGATCA	3 cut(s)	232, 268, 604
BcnI	CCSGG	1 cut(s)	1174
BfaI	CTAG	5 cut(s)	338, 573, 755, 870, 1124
BfmI	CTRYAG	2 cut(s)	994, 1215
BglII	AGATCT	1 cut(s)	719
BisI	GCNGC	5 cut(s)	66, 656, 730, 997, 1000
BlpI	GCTNAGC	1 cut(s)	1290
BlsI	GCNGC	5 cut(s)	67, 657, 731, 998, 1001
Bme1390I	CCNGG	2 cut(s)	845, 1174
Bme18I	GGWCC	2 cut(s)	246, 373
BmgT120I	GGNCC	7 cut(s)	4, 246, 373, 1227, 1228, 1274, 1275
BmiI	GGNNCC	8 cut(s)	6, 374, 455, 512, 638, 808, 1229, 1276
BmrFI	CCNGG	2 cut(s)	845, 1174
BmrI	ACTGGG	2 cut(s)	64, 1152
BmsI	GCATC	5 cut(s)	559, 772, 841, 919, 974
BmuI	ACTGGG	2 cut(s)	64, 1152
BpiI	GAAGAC	1 cut(s)	473
BpmI	CTGGAG	2 cut(s)	887, 1108
Bpu10I	CCTNAGC	1 cut(s)	377
Bpu1102I	GCTNAGC	1 cut(s)	1290
BpuEI	CTTGAG	2 cut(s)	718, 1248
BpuMI	CCSGG	1 cut(s)	1174
BsaHI	GRCGYC	1 cut(s)	148
BsaJI	CCNNGG	5 cut(s)	249, 481, 669, 727, 843
BsaWI	WCCGGW	1 cut(s)	1181
Bsc4I	CCNNNNNNNGG	2 cut(s)	255, 364
Bse118I	RCCGGY	1 cut(s)	476
Bse1I	ACTGG	6 cut(s)	70, 512, 656, 904, 985, 1147
Bse3DI	GCAATG	2 cut(s)	949, 1254
BseAI	TCCGGA	1 cut(s)	1181
BseBI	CCWGG	1 cut(s)	845
BseDI	CCNNGG	5 cut(s)	249, 481, 669, 727, 843
BseGI	GGATG	4 cut(s)	574, 763, 910, 989
BseLI	CCNNNNNNNGG	2 cut(s)	255, 364
BseMI	GCAATG	2 cut(s)	949, 1254
BseMII	CTCAG	2 cut(s)	368, 1304
BseNI	ACTGG	6 cut(s)	70, 512, 656, 904, 985, 1147
BseRI	GAGGAG	1 cut(s)	961
BseSI	GKGCMC	3 cut(s)	302, 1231, 1278
BseXI	GCAGC	4 cut(s)	52, 642, 1008, 1011
Bsh1236I	CGCG	2 cut(s)	729, 1043
BshFI	GGCC	5 cut(s)	5, 480, 732, 1229, 1276
BshNI	GGYRCC	2 cut(s)	453, 510
BsiSI	CCGG	3 cut(s)	477, 1174, 1182
BslFI	GGGAC	3 cut(s)	386, 560, 1054
BslI	CCNNNNNNNGG	2 cut(s)	255, 364
BsmFI	GGGAC	3 cut(s)	386, 560, 1054
BsmI	GAATGC	1 cut(s)	622
BsnI	GGCC	5 cut(s)	5, 480, 732, 1229, 1276
Bsp120I	GGGCCC	2 cut(s)	1227, 1274
Bsp1286I	GDGCHC	4 cut(s)	103, 302, 1231, 1278
Bsp13I	TCCGGA	1 cut(s)	1181
Bsp1720I	GCTNAGC	1 cut(s)	1290
Bsp19I	CCATGG	2 cut(s)	249, 481
Bsp68I	TCGCGA	1 cut(s)	1043
BspACI	CCGC	4 cut(s)	727, 729, 1282, 1315
BspANI	GGCC	5 cut(s)	5, 480, 732, 1229, 1276
BspCNI	CTCAG	2 cut(s)	369, 1303
BspEI	TCCGGA	1 cut(s)	1181
BspFNI	CGCG	2 cut(s)	729, 1043
BspHI	TCATGA	1 cut(s)	229
BspLI	GGNNCC	8 cut(s)	6, 374, 455, 512, 638, 808, 1229, 1276
BspMAI	CTGCAG	1 cut(s)	998
BspPI	GGATC	6 cut(s)	287, 681, 801, 814, 906, 1192
BspT107I	GGYRCC	2 cut(s)	453, 510
BsrDI	GCAATG	2 cut(s)	949, 1254
BsrFI	RCCGGY	1 cut(s)	476
BsrI	ACTGG	6 cut(s)	70, 512, 656, 904, 985, 1147
BssAI	RCCGGY	1 cut(s)	476
BssECI	CCNNGG	5 cut(s)	249, 481, 669, 727, 843
BssNI	GRCGYC	1 cut(s)	148
BssT1I	CCWWGG	3 cut(s)	249, 481, 669
Bst2UI	CCWGG	1 cut(s)	845
Bst4CI	ACNGT	5 cut(s)	37, 430, 453, 551, 564
Bst6I	CTCTTC	2 cut(s)	311, 1059
BstACI	GRCGYC	1 cut(s)	148
BstDEI	CTNAG	3 cut(s)	377, 716, 1290
BstDSI	CCRYGG	3 cut(s)	249, 481, 727
BstF5I	GGATG	4 cut(s)	574, 763, 910, 989
BstFNI	CGCG	2 cut(s)	729, 1043
BstHHI	GCGC	3 cut(s)	81, 89, 1086
BstMWI	GCNNNNNNNGC	3 cut(s)	829, 948, 993
BstNI	CCWGG	1 cut(s)	845
BstSCI	CCNGG	2 cut(s)	843, 1172
BstSFI	CTRYAG	2 cut(s)	994, 1215
BstSLI	GKGCMC	3 cut(s)	302, 1231, 1278
BstUI	CGCG	2 cut(s)	729, 1043
BstV1I	GCAGC	4 cut(s)	52, 642, 1008, 1011
BstV2I	GAAGAC	1 cut(s)	473
BstX2I	RGATCY	4 cut(s)	279, 719, 806, 898
BstYI	RGATCY	4 cut(s)	279, 719, 806, 898
BsuRI	GGCC	5 cut(s)	5, 480, 732, 1229, 1276
BtgI	CCRYGG	3 cut(s)	249, 481, 727
BtsCI	GGATG	4 cut(s)	574, 763, 910, 989
BtsIMutI	CAGTG	4 cut(s)	556, 796, 911, 978
BtuMI	TCGCGA	1 cut(s)	1043
CaiI	CAGNNNCTG	1 cut(s)	1031
CciI	TCATGA	1 cut(s)	229
CfoI	GCGC	3 cut(s)	81, 89, 1086
Cfr10I	RCCGGY	1 cut(s)	476
Cfr13I	GGNCC	7 cut(s)	4, 246, 373, 1227, 1228, 1274, 1275
Cfr42I	CCGCGG	1 cut(s)	730
CseI	GACGC	1 cut(s)	137
Csp6I	GTAC	1 cut(s)	976
CspCI	CAANNNNNGTGG	2 cut(s)	19, 54
CviAII	CATG	7 cut(s)	209, 230, 250, 325, 359, 411, 482
CviQI	GTAC	1 cut(s)	976
DdeI	CTNAG	3 cut(s)	377, 716, 1290
DrdI	GACNNNNNNGTC	1 cut(s)	554
DseDI	GACNNNNNNGTC	1 cut(s)	554
EaeI	YGGCCR	2 cut(s)	478, 730
Eam1104I	CTCTTC	2 cut(s)	311, 1059
EarI	CTCTTC	2 cut(s)	311, 1059
Eco130I	CCWWGG	3 cut(s)	249, 481, 669
Eco24I	GRGCYC	3 cut(s)	103, 1231, 1278
Eco47I	GGWCC	2 cut(s)	246, 373
Eco57I	CTGAAG	1 cut(s)	1186
EcoO109I	RGGNCCY	2 cut(s)	373, 1274
EcoRII	CCWGG	1 cut(s)	843
EcoT14I	CCWWGG	3 cut(s)	249, 481, 669
EcoT38I	GRGCYC	3 cut(s)	103, 1231, 1278
ErhI	CCWWGG	3 cut(s)	249, 481, 669
FaeI	CATG	7 cut(s)	212, 233, 253, 328, 362, 414, 485
FalI	AAGNNNNNCTT	2 cut(s)	1056, 1088
FaqI	GGGAC	3 cut(s)	386, 560, 1054
FatI	CATG	7 cut(s)	208, 229, 249, 324, 358, 410, 481
FauNDI	CATATG	1 cut(s)	924
FbaI	TGATCA	3 cut(s)	232, 268, 604
Fnu4HI	GCNGC	5 cut(s)	66, 656, 730, 997, 1000
FokI	GGATG	4 cut(s)	581, 750, 897, 996
FriOI	GRGCYC	3 cut(s)	103, 1231, 1278
Fsp4HI	GCNGC	5 cut(s)	66, 656, 730, 997, 1000
FspBI	CTAG	5 cut(s)	338, 573, 755, 870, 1124
FspI	TGCGCA	1 cut(s)	88
GlaI	GCGC	3 cut(s)	80, 88, 1085
GluI	GCNGC	5 cut(s)	66, 656, 730, 997, 1000
GsuI	CTGGAG	2 cut(s)	887, 1108
HaeIII	GGCC	5 cut(s)	5, 480, 732, 1229, 1276
HapII	CCGG	3 cut(s)	477, 1174, 1182
HgaI	GACGC	1 cut(s)	137
HhaI	GCGC	3 cut(s)	81, 89, 1086
Hin1I	GRCGYC	1 cut(s)	148
Hin1II	CATG	7 cut(s)	212, 233, 253, 328, 362, 414, 485
Hin6I	GCGC	3 cut(s)	79, 87, 1084
HinP1I	GCGC	3 cut(s)	79, 87, 1084
HincII	GTYRAC	1 cut(s)	505
HindII	GTYRAC	1 cut(s)	505
HindIII	AAGCTT	1 cut(s)	686
HinfI	GANTC	5 cut(s)	197, 220, 347, 362, 1067
HpaII	CCGG	3 cut(s)	477, 1174, 1182
HphI	GGTGA	5 cut(s)	206, 299, 347, 1115, 1179
Hpy166II	GTNNAC	4 cut(s)	180, 505, 978, 1198
Hpy188I	TCNGA	6 cut(s)	390, 418, 528, 738, 1033, 1117
Hpy188III	TCNNGA	7 cut(s)	187, 230, 272, 371, 1042, 1095, 1182
Hpy8I	GTNNAC	4 cut(s)	180, 505, 978, 1198
HpyAV	CCTTC	3 cut(s)	147, 703, 1156
HpyCH4III	ACNGT	5 cut(s)	37, 430, 453, 551, 564
HpyCH4V	TGCA	3 cut(s)	622, 863, 996
HpyF10VI	GCNNNNNNNGC	3 cut(s)	829, 948, 993
HpyF3I	CTNAG	3 cut(s)	377, 716, 1290
Hsp92I	GRCGYC	1 cut(s)	148
Hsp92II	CATG	7 cut(s)	212, 233, 253, 328, 362, 414, 485
HspAI	GCGC	3 cut(s)	79, 87, 1084
Kpn2I	TCCGGA	1 cut(s)	1181
Ksp22I	TGATCA	3 cut(s)	232, 268, 604
KspI	CCGCGG	1 cut(s)	730
LmnI	GCTCC	1 cut(s)	974
Lsp1109I	GCAGC	4 cut(s)	52, 642, 1008, 1011
LweI	GCATC	5 cut(s)	559, 772, 841, 919, 974
MaeI	CTAG	5 cut(s)	338, 573, 755, 870, 1124
MaeIII	GTNAC	6 cut(s)	320, 493, 647, 745, 875, 1267
MboII	GAAGA	5 cut(s)	102, 328, 478, 788, 1076
MflI	RGATCY	4 cut(s)	279, 719, 806, 898
MhlI	GDGCHC	4 cut(s)	103, 302, 1231, 1278
MluCI	AATT	8 cut(s)	91, 212, 394, 613, 852, 1008, 1221, 1327
MlyI	GAGTC	2 cut(s)	206, 1076
MmeI	TCCRAC	2 cut(s)	368, 467
MnlI	CCTC	8 cut(s)	138, 210, 693, 777, 982, 1029, 1120, 1253
MroI	TCCGGA	1 cut(s)	1181
MroXI	GAANNNNTTC	1 cut(s)	366
MseI	TTAA	6 cut(s)	51, 330, 432, 684, 1154, 1325
MspA1I	CMGCKG	2 cut(s)	729, 1315
MspI	CCGG	3 cut(s)	477, 1174, 1182
MspR9I	CCNGG	2 cut(s)	845, 1174
Mva1269I	GAATGC	1 cut(s)	622
MvaI	CCWGG	1 cut(s)	845
MvnI	CGCG	2 cut(s)	729, 1043
MwoI	GCNNNNNNNGC	3 cut(s)	829, 948, 993
NciI	CCSGG	1 cut(s)	1174
NcoI	CCATGG	2 cut(s)	249, 481
NdeI	CATATG	1 cut(s)	924
NlaIII	CATG	7 cut(s)	212, 233, 253, 328, 362, 414, 485
NlaIV	GGNNCC	8 cut(s)	6, 374, 455, 512, 638, 808, 1229, 1276
NmuCI	GTSAC	3 cut(s)	493, 745, 1267
NruI	TCGCGA	1 cut(s)	1043
NsbI	TGCGCA	1 cut(s)	88
PagI	TCATGA	1 cut(s)	229
PctI	GAATGC	1 cut(s)	622
PdmI	GAANNNNTTC	1 cut(s)	366
PfeI	GAWTC	3 cut(s)	220, 347, 362
PflMI	CCANNNNNTGG	1 cut(s)	255
PkrI	GCNGC	5 cut(s)	67, 657, 731, 998, 1001
PleI	GAGTC	2 cut(s)	205, 1075
PpsI	GAGTC	2 cut(s)	205, 1075
PpuMI	RGGWCCY	1 cut(s)	373
PshBI	ATTAAT	1 cut(s)	330
PsiI	TTATAA	1 cut(s)	1076
Psp5II	RGGWCCY	1 cut(s)	373
Psp6I	CCWGG	1 cut(s)	843
PspGI	CCWGG	1 cut(s)	843
PspN4I	GGNNCC	8 cut(s)	6, 374, 455, 512, 638, 808, 1229, 1276
PspOMI	GGGCCC	2 cut(s)	1227, 1274
PspPI	GGNCC	7 cut(s)	4, 246, 373, 1227, 1228, 1274, 1275
PspPPI	RGGWCCY	1 cut(s)	373
PstI	CTGCAG	1 cut(s)	998
PstNI	CAGNNNCTG	1 cut(s)	1031
PsuI	RGATCY	4 cut(s)	279, 719, 806, 898
RruI	TCGCGA	1 cut(s)	1043
RsaI	GTAC	1 cut(s)	977
RsaNI	GTAC	1 cut(s)	976
SacII	CCGCGG	1 cut(s)	730
SaqAI	TTAA	6 cut(s)	51, 330, 432, 684, 1154, 1325
SatI	GCNGC	5 cut(s)	66, 656, 730, 997, 1000
Sau96I	GGNCC	7 cut(s)	4, 246, 373, 1227, 1228, 1274, 1275
SchI	GAGTC	2 cut(s)	206, 1076
ScrFI	CCNGG	2 cut(s)	845, 1174
SduI	GDGCHC	4 cut(s)	103, 302, 1231, 1278
SfaNI	GCATC	5 cut(s)	559, 772, 841, 919, 974
SfcI	CTRYAG	2 cut(s)	994, 1215
Sfr303I	CCGCGG	1 cut(s)	730
SgrBI	CCGCGG	1 cut(s)	730
SinI	GGWCC	2 cut(s)	246, 373
SmlI	CTYRAG	2 cut(s)	697, 1263
SmoI	CTYRAG	2 cut(s)	697, 1263
Sse9I	AATT	8 cut(s)	91, 212, 394, 613, 852, 1008, 1221, 1327
SsiI	CCGC	4 cut(s)	727, 729, 1282, 1315
SspMI	CTAG	5 cut(s)	338, 573, 755, 870, 1124
StyD4I	CCNGG	2 cut(s)	843, 1172
StyI	CCWWGG	3 cut(s)	249, 481, 669
TaaI	ACNGT	5 cut(s)	37, 430, 453, 551, 564
TaqI	TCGA	2 cut(s)	113, 121
TasI	AATT	8 cut(s)	91, 212, 394, 613, 852, 1008, 1221, 1327
TauI	GCSGC	1 cut(s)	732
TfiI	GAWTC	3 cut(s)	220, 347, 362
Tru1I	TTAA	6 cut(s)	51, 330, 432, 684, 1154, 1325
Tru9I	TTAA	6 cut(s)	51, 330, 432, 684, 1154, 1325
TscAI	CASTG	4 cut(s)	556, 796, 911, 985
TseFI	GTSAC	3 cut(s)	493, 745, 1267
TseI	GCWGC	4 cut(s)	65, 655, 996, 999
Tsp45I	GTSAC	3 cut(s)	493, 745, 1267
TspDTI	ATGAA	6 cut(s)	225, 360, 375, 399, 722, 1077
TspRI	CASTG	4 cut(s)	556, 796, 911, 985
Van91I	CCANNNNNTGG	1 cut(s)	255
VpaK11BI	GGWCC	2 cut(s)	246, 373
VspI	ATTAAT	1 cut(s)	330
XapI	RAATTY	2 cut(s)	852, 1221
XcmI	CCANNNNNNNNNTGG	1 cut(s)	824
XmnI	GAANNNNTTC	1 cut(s)	366
XspI	CTAG	5 cut(s)	338, 573, 755, 870, 1124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.