Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0003662.1_g000002 Rmu_sc0042062.1_g000001 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 7, 210 |
| AcoI | YGGCCR | 1 cut(s) | 362 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 278, 279, 318 |
| AgsI | TTSAA | 1 cut(s) | 50 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 251, 283 |
| AluBI | AGCT | 5 cut(s) | 89, 142, 149, 251, 335 |
| AluI | AGCT | 5 cut(s) | 89, 142, 149, 251, 335 |
| Alw26I | GTCTC | 1 cut(s) | 350 |
| AoxI | GGCC | 2 cut(s) | 106, 362 |
| ApeKI | GCWGC | 2 cut(s) | 80, 174 |
| AsuHPI | GGTGA | 3 cut(s) | 109, 156, 220 |
| BalI | TGGCCA | 1 cut(s) | 364 |
| BbvI | GCAGC | 2 cut(s) | 92, 161 |
| BccI | CCATC | 2 cut(s) | 71, 281 |
| BclI | TGATCA | 2 cut(s) | 243, 325 |
| BcoDI | GTCTC | 1 cut(s) | 350 |
| BfmI | CTRYAG | 1 cut(s) | 232 |
| BisI | GCNGC | 2 cut(s) | 81, 175 |
| BlsI | GCNGC | 2 cut(s) | 82, 176 |
| BmrI | ACTGGG | 1 cut(s) | 179 |
| BmsI | GCATC | 1 cut(s) | 164 |
| BmuI | ACTGGG | 1 cut(s) | 179 |
| BoxI | GACNNNNGTC | 1 cut(s) | 36 |
| BsaBI | GATNNNNATC | 1 cut(s) | 287 |
| BsaJI | CCNNGG | 1 cut(s) | 213 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 278, 279, 318 |
| Bse1I | ACTGG | 1 cut(s) | 174 |
| Bse8I | GATNNNNATC | 1 cut(s) | 287 |
| BseDI | CCNNGG | 1 cut(s) | 213 |
| BseJI | GATNNNNATC | 1 cut(s) | 287 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 278, 279, 318 |
| BseNI | ACTGG | 1 cut(s) | 174 |
| BseRI | GAGGAG | 2 cut(s) | 49, 122 |
| BseXI | GCAGC | 2 cut(s) | 92, 161 |
| BshFI | GGCC | 2 cut(s) | 108, 364 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 278, 279, 318 |
| BsmAI | GTCTC | 1 cut(s) | 350 |
| BsmBI | CGTCTC | 1 cut(s) | 350 |
| BsnI | GGCC | 2 cut(s) | 108, 364 |
| Bsp143I | GATC | 3 cut(s) | 243, 303, 325 |
| Bsp19I | CCATGG | 1 cut(s) | 213 |
| BspACI | CCGC | 2 cut(s) | 7, 210 |
| BspANI | GGCC | 2 cut(s) | 108, 364 |
| BsrI | ACTGG | 1 cut(s) | 174 |
| BssECI | CCNNGG | 1 cut(s) | 213 |
| BssMI | GATC | 3 cut(s) | 243, 303, 325 |
| BssT1I | CCWWGG | 1 cut(s) | 213 |
| Bst6I | CTCTTC | 1 cut(s) | 116 |
| BstDSI | CCRYGG | 1 cut(s) | 213 |
| BstKTI | GATC | 3 cut(s) | 246, 306, 328 |
| BstMAI | GTCTC | 1 cut(s) | 350 |
| BstMBI | GATC | 3 cut(s) | 243, 303, 325 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 86 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 36 |
| BstSFI | CTRYAG | 1 cut(s) | 232 |
| BstV1I | GCAGC | 2 cut(s) | 92, 161 |
| BsuRI | GGCC | 2 cut(s) | 108, 364 |
| BtgI | CCRYGG | 1 cut(s) | 213 |
| BtsIMutI | CAGTG | 1 cut(s) | 167 |
| CseI | GACGC | 1 cut(s) | 332 |
| CviAII | CATG | 3 cut(s) | 214, 241, 340 |
| CviJI | RGCY | 9 cut(s) | 83, 89, 108, 142, 149, 174, 251, 335, 364 |
| CviKI_1 | RGCY | 9 cut(s) | 83, 89, 108, 142, 149, 174, 251, 335, 364 |
| DpnI | GATC | 3 cut(s) | 245, 305, 327 |
| DpnII | GATC | 3 cut(s) | 243, 303, 325 |
| EaeI | YGGCCR | 1 cut(s) | 362 |
| Eam1104I | CTCTTC | 1 cut(s) | 116 |
| EarI | CTCTTC | 1 cut(s) | 116 |
| Eco130I | CCWWGG | 1 cut(s) | 213 |
| Eco147I | AGGCCT | 1 cut(s) | 108 |
| EcoT14I | CCWWGG | 1 cut(s) | 213 |
| ErhI | CCWWGG | 1 cut(s) | 213 |
| Esp3I | CGTCTC | 1 cut(s) | 350 |
| FaeI | CATG | 3 cut(s) | 217, 244, 343 |
| FaiI | YATR | 9 cut(s) | 23, 146, 215, 242, 288, 294, 300, 302, 341 |
| FatI | CATG | 3 cut(s) | 213, 240, 339 |
| FauNDI | CATATG | 1 cut(s) | 300 |
| FbaI | TGATCA | 2 cut(s) | 243, 325 |
| Fnu4HI | GCNGC | 2 cut(s) | 81, 175 |
| Fsp4HI | GCNGC | 2 cut(s) | 81, 175 |
| GluI | GCNGC | 2 cut(s) | 81, 175 |
| HaeIII | GGCC | 2 cut(s) | 108, 364 |
| HgaI | GACGC | 1 cut(s) | 332 |
| Hin1II | CATG | 3 cut(s) | 217, 244, 343 |
| HindIII | AAGCTT | 1 cut(s) | 87 |
| HinfI | GANTC | 1 cut(s) | 283 |
| HphI | GGTGA | 3 cut(s) | 109, 156, 220 |
| Hpy188I | TCNGA | 4 cut(s) | 31, 248, 330, 383 |
| Hpy188III | TCNNGA | 2 cut(s) | 94, 307 |
| Hpy99I | CGWCG | 1 cut(s) | 42 |
| HpyAV | CCTTC | 1 cut(s) | 44 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 86 |
| Hsp92II | CATG | 3 cut(s) | 217, 244, 343 |
| Ksp22I | TGATCA | 2 cut(s) | 243, 325 |
| Kzo9I | GATC | 3 cut(s) | 243, 303, 325 |
| LpnPI | CCDG | 6 cut(s) | 90, 107, 134, 155, 244, 346 |
| Lsp1109I | GCAGC | 2 cut(s) | 92, 161 |
| LweI | GCATC | 1 cut(s) | 164 |
| MaeIII | GTNAC | 1 cut(s) | 307 |
| MalI | GATC | 3 cut(s) | 245, 305, 327 |
| MboI | GATC | 3 cut(s) | 243, 303, 325 |
| MboII | GAAGA | 3 cut(s) | 38, 103, 106 |
| MlsI | TGGCCA | 1 cut(s) | 364 |
| MluNI | TGGCCA | 1 cut(s) | 364 |
| MnlI | CCTC | 7 cut(s) | 27, 63, 70, 119, 138, 143, 188 |
| Mox20I | TGGCCA | 1 cut(s) | 364 |
| MscI | TGGCCA | 1 cut(s) | 364 |
| Msp20I | TGGCCA | 1 cut(s) | 364 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 86 |
| NcoI | CCATGG | 1 cut(s) | 213 |
| NdeI | CATATG | 1 cut(s) | 300 |
| NdeII | GATC | 3 cut(s) | 243, 303, 325 |
| NlaIII | CATG | 3 cut(s) | 217, 244, 343 |
| NmuCI | GTSAC | 1 cut(s) | 307 |
| PceI | AGGCCT | 1 cut(s) | 108 |
| PfeI | GAWTC | 1 cut(s) | 283 |
| PkrI | GCNGC | 2 cut(s) | 82, 176 |
| PshAI | GACNNNNGTC | 1 cut(s) | 36 |
| SatI | GCNGC | 2 cut(s) | 81, 175 |
| Sau3AI | GATC | 3 cut(s) | 243, 303, 325 |
| SetI | ASST | 9 cut(s) | 36, 55, 91, 130, 144, 151, 233, 253, 337 |
| SfaNI | GCATC | 1 cut(s) | 164 |
| SfcI | CTRYAG | 1 cut(s) | 232 |
| SseBI | AGGCCT | 1 cut(s) | 108 |
| SsiI | CCGC | 2 cut(s) | 7, 210 |
| StuI | AGGCCT | 1 cut(s) | 108 |
| StyI | CCWWGG | 1 cut(s) | 213 |
| TaqI | TCGA | 1 cut(s) | 75 |
| TfiI | GAWTC | 1 cut(s) | 283 |
| TscAI | CASTG | 1 cut(s) | 174 |
| TseFI | GTSAC | 1 cut(s) | 307 |
| TseI | GCWGC | 2 cut(s) | 80, 174 |
| Tsp45I | GTSAC | 1 cut(s) | 307 |
| TspDTI | ATGAA | 2 cut(s) | 17, 275 |
| TspGWI | ACGGA | 1 cut(s) | 367 |
| TspRI | CASTG | 1 cut(s) | 174 |