Rmu_sc0003882.1_g000022

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003882.1
Physical Location & Seq
Reverse (-)
67564 .. 68061
498 bp
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UTR
Exon/CDS
Intron
Rmu_sc0003882.1_g000022.1.cds

Sequence Viewer

Length: 498 bp
atggaaattgctttgggacttgaagcttctgggcagcaattcatttgggttgtcaaaaaagatgaaaacaatggttatgaaagtagtgaggattggtcgcctcaagggtttgagaagaaagttgaaggcaaaggactaatcatacgagggtgggttcctcaagtgcaaattattgaacacctggcagtcggcggctttgtgactcattatgggtggaactctgtgattgaagcaatttctgatgaagttccgatggctatgtggccagcatttgttgaccaattttacaatgagaagctggtgatccaaatacttggcattggggttggtgttggtgtttcaaaatgggctagatttggaggggaaagagtgaagagtgtagctatagagacggtggtgaaacagattatggtgggtgaaaaatcagaggaaatgagaagcagagccaagaaacttagggaaatggcaagaaatagtgtgaaggaaggtggatcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

165

Amino Acids

18.38

Weight (kDa)

5.8

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030342)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0276941
rosa_multiflora Rmu_sc0003882.1_g000022

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 192
AclWI GGATC 1 cut(s) 298
AcoI YGGCCR 1 cut(s) 263
AgsI TTSAA 5 cut(s) 23, 125, 176, 230, 342
AjnI CCWGG 1 cut(s) 180
AluBI AGCT 3 cut(s) 26, 298, 383
AluI AGCT 3 cut(s) 26, 298, 383
Alw26I GTCTC 1 cut(s) 383
AlwI GGATC 1 cut(s) 298
AoxI GGCC 1 cut(s) 263
ApeKI GCWGC 1 cut(s) 34
AsuHPI GGTGA 3 cut(s) 313, 409, 428
BalI TGGCCA 1 cut(s) 265
BbvI GCAGC 1 cut(s) 46
BccI CCATC 1 cut(s) 247
BciT130I CCWGG 1 cut(s) 182
BcoDI GTCTC 1 cut(s) 383
BfaI CTAG 1 cut(s) 351
BfmI CTRYAG 1 cut(s) 384
BisI GCNGC 2 cut(s) 35, 193
BlsI GCNGC 2 cut(s) 36, 194
Bme1390I CCNGG 1 cut(s) 182
BmiI GGNNCC 1 cut(s) 156
BmrFI CCNGG 1 cut(s) 182
BpuEI CTTGAG 2 cut(s) 87, 144
BseBI CCWGG 1 cut(s) 182
BseXI GCAGC 1 cut(s) 46
BshFI GGCC 1 cut(s) 265
BslFI GGGAC 1 cut(s) 30
BsmAI GTCTC 1 cut(s) 383
BsmBI CGTCTC 1 cut(s) 383
BsmFI GGGAC 1 cut(s) 30
BsnI GGCC 1 cut(s) 265
Bsp143I GATC 2 cut(s) 303, 491
BspACI CCGC 1 cut(s) 192
BspANI GGCC 1 cut(s) 265
BspLI GGNNCC 1 cut(s) 156
BspPI GGATC 1 cut(s) 298
BssMI GATC 2 cut(s) 303, 491
Bst2UI CCWGG 1 cut(s) 182
Bst4CI ACNGT 1 cut(s) 394
Bst6I CTCTTC 1 cut(s) 368
BstC8I GCNNGC 1 cut(s) 267
BstDEI CTNAG 1 cut(s) 455
BstKTI GATC 2 cut(s) 306, 494
BstMAI GTCTC 1 cut(s) 383
BstMBI GATC 2 cut(s) 303, 491
BstNI CCWGG 1 cut(s) 182
BstSCI CCNGG 1 cut(s) 180
BstSFI CTRYAG 1 cut(s) 384
BstV1I GCAGC 1 cut(s) 46
BstXI CCANNNNNNTGG 1 cut(s) 314
BsuRI GGCC 1 cut(s) 265
Cac8I GCNNGC 1 cut(s) 267
CviJI RGCY 8 cut(s) 26, 195, 257, 265, 298, 350, 383, 446
CviKI_1 RGCY 8 cut(s) 26, 195, 257, 265, 298, 350, 383, 446
DdeI CTNAG 1 cut(s) 455
DpnI GATC 2 cut(s) 305, 493
DpnII GATC 2 cut(s) 303, 491
EaeI YGGCCR 1 cut(s) 263
Eam1104I CTCTTC 1 cut(s) 368
EarI CTCTTC 1 cut(s) 368
EcoRII CCWGG 1 cut(s) 180
Esp3I CGTCTC 1 cut(s) 383
FaiI YATR 7 cut(s) 78, 143, 210, 260, 386, 410, 496
FaqI GGGAC 1 cut(s) 30
Fnu4HI GCNGC 2 cut(s) 35, 193
Fsp4HI GCNGC 2 cut(s) 35, 193
FspBI CTAG 1 cut(s) 351
GluI GCNGC 2 cut(s) 35, 193
HaeIII GGCC 1 cut(s) 265
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HindIII AAGCTT 1 cut(s) 24
HinfI GANTC 1 cut(s) 202
HphI GGTGA 3 cut(s) 313, 409, 428
Hpy166II GTNNAC 1 cut(s) 277
Hpy188I TCNGA 3 cut(s) 241, 252, 427
Hpy8I GTNNAC 1 cut(s) 277
HpyAV CCTTC 3 cut(s) 119, 475, 479
HpyCH4III ACNGT 1 cut(s) 394
HpyCH4V TGCA 1 cut(s) 166
HpyF3I CTNAG 1 cut(s) 455
Kzo9I GATC 2 cut(s) 303, 491
LpnPI CCDG 5 cut(s) 15, 167, 194, 279, 284
Lsp1109I GCAGC 1 cut(s) 46
MaeI CTAG 1 cut(s) 351
MaeIII GTNAC 1 cut(s) 199
MalI GATC 2 cut(s) 305, 493
MboI GATC 2 cut(s) 303, 491
MboII GAAGA 2 cut(s) 127, 385
MlsI TGGCCA 1 cut(s) 265
MluCI AATT 5 cut(s) 6, 38, 168, 234, 281
MluNI TGGCCA 1 cut(s) 265
MlyI GAGTC 1 cut(s) 196
MnlI CCTC 6 cut(s) 82, 111, 140, 168, 353, 421
Mox20I TGGCCA 1 cut(s) 265
MscI TGGCCA 1 cut(s) 265
Msp20I TGGCCA 1 cut(s) 265
MspR9I CCNGG 1 cut(s) 182
MvaI CCWGG 1 cut(s) 182
NdeII GATC 2 cut(s) 303, 491
NlaIV GGNNCC 1 cut(s) 156
NmuCI GTSAC 1 cut(s) 199
PkrI GCNGC 2 cut(s) 36, 194
PleI GAGTC 1 cut(s) 196
PpsI GAGTC 1 cut(s) 196
Psp6I CCWGG 1 cut(s) 180
PspGI CCWGG 1 cut(s) 180
PspN4I GGNNCC 1 cut(s) 156
SatI GCNGC 2 cut(s) 35, 193
Sau3AI GATC 2 cut(s) 303, 491
SchI GAGTC 1 cut(s) 196
ScrFI CCNGG 1 cut(s) 182
SetI ASST 5 cut(s) 28, 183, 300, 385, 490
SfcI CTRYAG 1 cut(s) 384
SmlI CTYRAG 2 cut(s) 102, 159
SmoI CTYRAG 2 cut(s) 102, 159
Sse9I AATT 5 cut(s) 6, 38, 168, 234, 281
SsiI CCGC 1 cut(s) 192
SspMI CTAG 1 cut(s) 351
StyD4I CCNGG 1 cut(s) 180
TaaI ACNGT 1 cut(s) 394
TasI AATT 5 cut(s) 6, 38, 168, 234, 281
TauI GCSGC 1 cut(s) 195
TseFI GTSAC 1 cut(s) 199
TseI GCWGC 1 cut(s) 34
Tsp45I GTSAC 1 cut(s) 199
TspDTI ATGAA 4 cut(s) 31, 78, 93, 258
XspI CTAG 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.