Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004700.1

Orthogroup ID

OG0030659

Physical Location & Seq

Genomic Coordinates Reverse (-)

70441 .. 70800

Gene Structure 360 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 360 bp

atgatttcttctctcaacgaagactttccatgcctccttccttccttctccccaatcccacttccttctttcttcactccagtgagttacgatctttcgaaggcggttccgatcaacgtcgacagaatcccagtggcggttgtcatcggacatgtgtctattccgaataagttgtcattgctggtggtccagctagttctggcgcctggttcgctaatgaaaacgttttcgaaagagctcaaggcttcccagtcaataatgtctccgacttcagtgatcactttcaatcgaagaaacaaggatgacatgacaaaggagttggaagggccgaatcagcgacggttttgccaacgtcggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001664 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0004857 GO:0005095 GO:0005102 GO:0005488 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005834 GO:0005886 GO:0007154 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0008150 GO:0009898 GO:0009987 GO:0016020 GO:0016247 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0019897 GO:0019898 GO:0023052 GO:0030234 GO:0030695 GO:0031234 GO:0031683 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0034260 GO:0035639 GO:0036094 GO:0043086 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0044877 GO:0048519 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051336 GO:0051346 GO:0051716 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0098772 GO:0098796 GO:0098797 GO:1901265 GO:1901363 GO:1902494 GO:1905360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-alpha

Protein Analysis

119

Amino Acids

13.26

Weight (kDa)

9.62

Isoelectric Point (pI)

62.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0030659)

Species	Orthologous Gene IDs
rosa_laevigata	RLG00000006040
rosa_multiflora	Rmu_sc0004700.1_g000020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	202
AccI	GTMKAC	1 cut(s)	120
AciI	CCGC	2 cut(s)	104, 137
AclI	AACGTT	1 cut(s)	224
AcuI	CTGAAG	1 cut(s)	255
AcyI	GRCGYC	1 cut(s)	203
AfiI	CCNNNNNNNGG	1 cut(s)	136
AflIII	ACRYGT	1 cut(s)	151
AgsI	TTSAA	1 cut(s)	286
AjnI	CCWGG	1 cut(s)	205
AleI	CACNNNNGTG	1 cut(s)	80
AluBI	AGCT	2 cut(s)	193, 238
AluI	AGCT	2 cut(s)	193, 238
Alw21I	GWGCWC	1 cut(s)	240
Alw26I	GTCTC	1 cut(s)	267
AoxI	GGCC	1 cut(s)	326
ArsI	GACNNNNNNTTYG	2 cut(s)	158, 190
Asp700I	GAANNNNTTC	1 cut(s)	24
AspLEI	GCGC	1 cut(s)	205
AspS9I	GGNCC	2 cut(s)	187, 326
AsuII	TTCGAA	2 cut(s)	98, 230
AvaII	GGWCC	1 cut(s)	187
BanI	GGYRCC	1 cut(s)	202
BanII	GRGCYC	1 cut(s)	240
BbsI	GAAGAC	1 cut(s)	27
Bbv12I	GWGCWC	1 cut(s)	240
BcgI	CGANNNNNNTGC	1 cut(s)	327
BciT130I	CCWGG	1 cut(s)	207
BclI	TGATCA	1 cut(s)	276
BcoDI	GTCTC	1 cut(s)	267
BfaI	CTAG	1 cut(s)	194
BfoI	RGCGCY	1 cut(s)	206
Bme1390I	CCNGG	1 cut(s)	207
Bme18I	GGWCC	1 cut(s)	187
BmgT120I	GGNCC	2 cut(s)	187, 326
BmiI	GGNNCC	2 cut(s)	108, 204
BmrFI	CCNGG	1 cut(s)	207
BmrI	ACTGGG	2 cut(s)	125, 244
BmuI	ACTGGG	2 cut(s)	125, 244
BoxI	GACNNNNGTC	1 cut(s)	154
BpiI	GAAGAC	1 cut(s)	27
BpmI	CTGGAG	1 cut(s)	63
Bpu14I	TTCGAA	2 cut(s)	98, 230
BpuEI	CTTGAG	1 cut(s)	224
BsaHI	GRCGYC	1 cut(s)	203
Bsc4I	CCNNNNNNNGG	1 cut(s)	136
Bse1I	ACTGG	3 cut(s)	80, 131, 250
Bse3DI	GCAATG	1 cut(s)	176
BseBI	CCWGG	1 cut(s)	207
BseGI	GGATG	1 cut(s)	307
BseLI	CCNNNNNNNGG	1 cut(s)	136
BseMI	GCAATG	1 cut(s)	176
BseNI	ACTGG	3 cut(s)	80, 131, 250
BshFI	GGCC	1 cut(s)	328
BshNI	GGYRCC	1 cut(s)	202
BsiHKAI	GWGCWC	1 cut(s)	240
BslI	CCNNNNNNNGG	1 cut(s)	136
BsmAI	GTCTC	1 cut(s)	267
BsnI	GGCC	1 cut(s)	328
Bsp119I	TTCGAA	2 cut(s)	98, 230
Bsp1286I	GDGCHC	1 cut(s)	240
Bsp143I	GATC	3 cut(s)	91, 111, 276
BspACI	CCGC	2 cut(s)	104, 137
BspANI	GGCC	1 cut(s)	328
BspLI	GGNNCC	2 cut(s)	108, 204
BspT104I	TTCGAA	2 cut(s)	98, 230
BspT107I	GGYRCC	1 cut(s)	202
BsrDI	GCAATG	1 cut(s)	176
BsrI	ACTGG	3 cut(s)	80, 131, 250
BssMI	GATC	3 cut(s)	91, 111, 276
BssNI	GRCGYC	1 cut(s)	203
Bst2UI	CCWGG	1 cut(s)	207
Bst4CI	ACNGT	1 cut(s)	342
BstACI	GRCGYC	1 cut(s)	203
BstBI	TTCGAA	2 cut(s)	98, 230
BstF5I	GGATG	1 cut(s)	307
BstH2I	RGCGCY	1 cut(s)	206
BstHHI	GCGC	1 cut(s)	205
BstKTI	GATC	3 cut(s)	94, 114, 279
BstMAI	GTCTC	1 cut(s)	267
BstMBI	GATC	3 cut(s)	91, 111, 276
BstMWI	GCNNNNNNNGC	2 cut(s)	211, 334
BstNI	CCWGG	1 cut(s)	207
BstNSI	RCATGY	1 cut(s)	155
BstPAI	GACNNNNGTC	1 cut(s)	154
BstSCI	CCNGG	1 cut(s)	205
BstV2I	GAAGAC	1 cut(s)	27
BsuRI	GGCC	1 cut(s)	328
BtsCI	GGATG	1 cut(s)	307
BtsIMutI	CAGTG	3 cut(s)	87, 138, 279
CfoI	GCGC	1 cut(s)	205
Cfr13I	GGNCC	2 cut(s)	187, 326
CviAII	CATG	3 cut(s)	30, 152, 307
CviJI	RGCY	4 cut(s)	193, 238, 245, 328
CviKI_1	RGCY	4 cut(s)	193, 238, 245, 328
DinI	GGCGCC	1 cut(s)	204
DpnI	GATC	3 cut(s)	93, 113, 278
DpnII	GATC	3 cut(s)	91, 111, 276
Ecl136II	GAGCTC	1 cut(s)	238
Eco24I	GRGCYC	1 cut(s)	240
Eco47I	GGWCC	1 cut(s)	187
Eco53kI	GAGCTC	1 cut(s)	238
Eco57I	CTGAAG	1 cut(s)	255
EcoICRI	GAGCTC	1 cut(s)	238
EcoRII	CCWGG	1 cut(s)	205
EcoT38I	GRGCYC	1 cut(s)	240
EgeI	GGCGCC	1 cut(s)	204
EheI	GGCGCC	1 cut(s)	204
FaeI	CATG	3 cut(s)	33, 155, 310
FaiI	YATR	3 cut(s)	31, 153, 308
FatI	CATG	3 cut(s)	29, 151, 306
FbaI	TGATCA	1 cut(s)	276
FblI	GTMKAC	1 cut(s)	120
FokI	GGATG	1 cut(s)	314
FriOI	GRGCYC	1 cut(s)	240
FspBI	CTAG	1 cut(s)	194
GlaI	GCGC	1 cut(s)	204
GsuI	CTGGAG	1 cut(s)	63
HaeII	RGCGCY	1 cut(s)	206
HaeIII	GGCC	1 cut(s)	328
HhaI	GCGC	1 cut(s)	205
Hin1I	GRCGYC	1 cut(s)	203
Hin1II	CATG	3 cut(s)	33, 155, 310
Hin6I	GCGC	1 cut(s)	203
HinP1I	GCGC	1 cut(s)	203
HincII	GTYRAC	1 cut(s)	121
HindII	GTYRAC	1 cut(s)	121
HinfI	GANTC	2 cut(s)	126, 331
Hpy166II	GTNNAC	1 cut(s)	121
Hpy188I	TCNGA	4 cut(s)	111, 149, 165, 267
Hpy8I	GTNNAC	1 cut(s)	121
Hpy99I	CGWCG	3 cut(s)	122, 342, 357
HpyAV	CCTTC	6 cut(s)	47, 51, 55, 75, 94, 317
HpyCH4III	ACNGT	1 cut(s)	342
HpyCH4IV	ACGT	3 cut(s)	117, 224, 352
HpyF10VI	GCNNNNNNNGC	2 cut(s)	211, 334
HpySE526I	ACGT	3 cut(s)	117, 224, 352
Hsp92I	GRCGYC	1 cut(s)	203
Hsp92II	CATG	3 cut(s)	33, 155, 310
HspAI	GCGC	1 cut(s)	203
KasI	GGCGCC	1 cut(s)	202
Ksp22I	TGATCA	1 cut(s)	276
Kzo9I	GATC	3 cut(s)	91, 111, 276
LpnPI	CCDG	8 cut(s)	93, 144, 167, 185, 192, 203, 219, 263
MaeI	CTAG	1 cut(s)	194
MaeII	ACGT	3 cut(s)	117, 224, 352
MaeIII	GTNAC	1 cut(s)	86
MalI	GATC	3 cut(s)	93, 113, 278
MboI	GATC	3 cut(s)	91, 111, 276
MboII	GAAGA	3 cut(s)	32, 64, 303
MhlI	GDGCHC	1 cut(s)	240
Mly113I	GGCGCC	1 cut(s)	203
MmeI	TCCRAC	2 cut(s)	290, 300
MnlI	CCTC	1 cut(s)	44
MroXI	GAANNNNTTC	1 cut(s)	24
MslI	CAYNNNNRTG	1 cut(s)	80
MspR9I	CCNGG	1 cut(s)	207
MvaI	CCWGG	1 cut(s)	207
MwoI	GCNNNNNNNGC	2 cut(s)	211, 334
NarI	GGCGCC	1 cut(s)	203
NdeII	GATC	3 cut(s)	91, 111, 276
NlaIII	CATG	3 cut(s)	33, 155, 310
NlaIV	GGNNCC	2 cut(s)	108, 204
NspI	RCATGY	1 cut(s)	155
NspV	TTCGAA	2 cut(s)	98, 230
OliI	CACNNNNGTG	1 cut(s)	80
PciI	ACATGT	1 cut(s)	151
PdmI	GAANNNNTTC	1 cut(s)	24
PfeI	GAWTC	2 cut(s)	126, 331
PluTI	GGCGCC	1 cut(s)	206
PscI	ACATGT	1 cut(s)	151
PshAI	GACNNNNGTC	1 cut(s)	154
Psp124BI	GAGCTC	1 cut(s)	240
Psp1406I	AACGTT	1 cut(s)	224
Psp6I	CCWGG	1 cut(s)	205
PspGI	CCWGG	1 cut(s)	205
PspN4I	GGNNCC	2 cut(s)	108, 204
PspPI	GGNCC	2 cut(s)	187, 326
RseI	CAYNNNNRTG	1 cut(s)	80
SacI	GAGCTC	1 cut(s)	240
SalI	GTCGAC	1 cut(s)	119
Sau3AI	GATC	3 cut(s)	91, 111, 276
Sau96I	GGNCC	2 cut(s)	187, 326
ScrFI	CCNGG	1 cut(s)	207
SduI	GDGCHC	1 cut(s)	240
SetI	ASST	5 cut(s)	120, 195, 227, 240, 355
SfoI	GGCGCC	1 cut(s)	204
SfuI	TTCGAA	2 cut(s)	98, 230
SinI	GGWCC	1 cut(s)	187
SmiMI	CAYNNNNRTG	1 cut(s)	80
SmlI	CTYRAG	1 cut(s)	239
SmoI	CTYRAG	1 cut(s)	239
SsiI	CCGC	2 cut(s)	104, 137
SspDI	GGCGCC	1 cut(s)	202
SspMI	CTAG	1 cut(s)	194
SstI	GAGCTC	1 cut(s)	240
StyD4I	CCNGG	1 cut(s)	205
TaaI	ACNGT	1 cut(s)	342
TaiI	ACGT	3 cut(s)	120, 227, 355
TaqI	TCGA	4 cut(s)	98, 120, 230, 289
TfiI	GAWTC	2 cut(s)	126, 331
TscAI	CASTG	3 cut(s)	87, 138, 279
TspDTI	ATGAA	1 cut(s)	233
TspRI	CASTG	3 cut(s)	87, 138, 279
VpaK11BI	GGWCC	1 cut(s)	187
XceI	RCATGY	1 cut(s)	155
XmiI	GTMKAC	1 cut(s)	120
XmnI	GAANNNNTTC	1 cut(s)	24
XspI	CTAG	1 cut(s)	194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.