Rmu_sc0005567.1_g000001

glutamine synthetase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005567.1
Physical Location & Seq
Forward (+)
163 .. 646
484 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 300 bp
atgagaaatgatggtgggattgaagtaatcaagaaggccattgaaaaactgagcttgcgtcacaaggagcacattgctgcttatggagaaggcaacgagaggagactgactggtcaccatgagaccgctgacatcaacactttctcttggggagtggcgaataggggtgcctccgtccgtgttggtcgtgataccgaaaaacaaggcaaagggtattttgaggacagaaggccagcgtccaacatggatccctatgttgtgacttccatgattgccgagaccaccattctcaccaagtag

Protein Analysis

99

Amino Acids

11.09

Weight (kDa)

9.05

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031343)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0005567.1_g000001 Rmu_sc0041925.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 111
AccB1I GGYRCC 1 cut(s) 167
AciI CCGC 1 cut(s) 126
AclWI GGATC 2 cut(s) 242, 255
AgsI TTSAA 2 cut(s) 23, 44
AluBI AGCT 1 cut(s) 54
AluI AGCT 1 cut(s) 54
Alw21I GWGCWC 1 cut(s) 72
Alw26I GTCTC 3 cut(s) 97, 116, 272
AlwI GGATC 2 cut(s) 242, 255
AoxI GGCC 2 cut(s) 36, 230
ApeKI GCWGC 1 cut(s) 77
AsuHPI GGTGA 2 cut(s) 107, 283
BamHI GGATCC 1 cut(s) 247
BanI GGYRCC 1 cut(s) 167
Bbv12I GWGCWC 1 cut(s) 72
BbvI GCAGC 1 cut(s) 64
BccI CCATC 1 cut(s) 5
BcoDI GTCTC 3 cut(s) 97, 116, 272
BisI GCNGC 1 cut(s) 78
BlsI GCNGC 1 cut(s) 79
BmiI GGNNCC 2 cut(s) 169, 249
BsaI GGTCTC 2 cut(s) 116, 272
Bse1I ACTGG 1 cut(s) 115
Bse3DI GCAATG 1 cut(s) 72
BseMI GCAATG 1 cut(s) 72
BseMII CTCAG 1 cut(s) 41
BseNI ACTGG 1 cut(s) 115
BseRI GAGGAG 1 cut(s) 115
BseXI GCAGC 1 cut(s) 64
BshFI GGCC 2 cut(s) 38, 232
BshNI GGYRCC 1 cut(s) 167
BsiHKAI GWGCWC 1 cut(s) 72
BsmAI GTCTC 3 cut(s) 97, 116, 272
BsnI GGCC 2 cut(s) 38, 232
Bso31I GGTCTC 2 cut(s) 116, 272
Bsp1286I GDGCHC 1 cut(s) 72
Bsp143I GATC 1 cut(s) 247
BspACI CCGC 1 cut(s) 126
BspANI GGCC 2 cut(s) 38, 232
BspCNI CTCAG 1 cut(s) 42
BspLI GGNNCC 2 cut(s) 169, 249
BspPI GGATC 2 cut(s) 242, 255
BspT107I GGYRCC 1 cut(s) 167
BspTNI GGTCTC 2 cut(s) 116, 272
BsrDI GCAATG 1 cut(s) 72
BsrI ACTGG 1 cut(s) 115
BssMI GATC 1 cut(s) 247
BstC8I GCNNGC 2 cut(s) 56, 234
BstDEI CTNAG 1 cut(s) 50
BstEII GGTNACC 1 cut(s) 113
BstKTI GATC 1 cut(s) 250
BstMAI GTCTC 3 cut(s) 97, 116, 272
BstMBI GATC 1 cut(s) 247
BstPI GGTNACC 1 cut(s) 113
BstV1I GCAGC 1 cut(s) 64
BstX2I RGATCY 1 cut(s) 247
BstYI RGATCY 1 cut(s) 247
BsuRI GGCC 2 cut(s) 38, 232
Cac8I GCNNGC 2 cut(s) 56, 234
CseI GACGC 2 cut(s) 47, 225
CviAII CATG 3 cut(s) 119, 244, 268
CviJI RGCY 3 cut(s) 38, 54, 232
CviKI_1 RGCY 3 cut(s) 38, 54, 232
DdeI CTNAG 1 cut(s) 50
DpnI GATC 1 cut(s) 249
DpnII GATC 1 cut(s) 247
DrdI GACNNNNNNGTC 1 cut(s) 111
DseDI GACNNNNNNGTC 1 cut(s) 111
Eco31I GGTCTC 2 cut(s) 116, 272
Eco91I GGTNACC 1 cut(s) 113
EcoO65I GGTNACC 1 cut(s) 113
FaeI CATG 3 cut(s) 122, 247, 271
FaiI YATR 5 cut(s) 84, 120, 245, 255, 269
FatI CATG 3 cut(s) 118, 243, 267
Fnu4HI GCNGC 1 cut(s) 78
Fsp4HI GCNGC 1 cut(s) 78
GluI GCNGC 1 cut(s) 78
HaeIII GGCC 2 cut(s) 38, 232
HgaI GACGC 2 cut(s) 47, 225
Hin1II CATG 3 cut(s) 122, 247, 271
HphI GGTGA 2 cut(s) 107, 283
Hpy188III TCNNGA 2 cut(s) 31, 188
HpyAV CCTTC 3 cut(s) 28, 83, 222
HpyF3I CTNAG 1 cut(s) 50
Hsp92II CATG 3 cut(s) 122, 247, 271
Kzo9I GATC 1 cut(s) 247
LmnI GCTCC 1 cut(s) 67
LpnPI CCDG 2 cut(s) 96, 246
Lsp1109I GCAGC 1 cut(s) 64
MaeIII GTNAC 3 cut(s) 59, 113, 259
MalI GATC 1 cut(s) 249
MboI GATC 1 cut(s) 247
MflI RGATCY 1 cut(s) 247
MhlI GDGCHC 1 cut(s) 72
MmeI TCCRAC 1 cut(s) 264
MnlI CCTC 3 cut(s) 93, 181, 214
MspA1I CMGCKG 1 cut(s) 128
NdeII GATC 1 cut(s) 247
NlaIII CATG 3 cut(s) 122, 247, 271
NlaIV GGNNCC 2 cut(s) 169, 249
NmuCI GTSAC 3 cut(s) 59, 113, 259
PkrI GCNGC 1 cut(s) 79
PspEI GGTNACC 1 cut(s) 113
PspN4I GGNNCC 2 cut(s) 169, 249
PsuI RGATCY 1 cut(s) 247
SatI GCNGC 1 cut(s) 78
Sau3AI GATC 1 cut(s) 247
SduI GDGCHC 1 cut(s) 72
SetI ASST 1 cut(s) 56
SsiI CCGC 1 cut(s) 126
TseFI GTSAC 3 cut(s) 59, 113, 259
TseI GCWGC 1 cut(s) 77
Tsp45I GTSAC 3 cut(s) 59, 113, 259
TspGWI ACGGA 2 cut(s) 163, 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.