Rmu_sc0006033.1_g000002

ARF guanine-nucleotide exchange factor GNOM-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006033.1
OG0028874
Physical Location & Seq
Reverse (-)
7334 .. 9361
2028 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2028 bp
atgtctggccctacaattgctgccatctctgtggtatttgatcacgcagaacatgaagaggtttatcaaacatgcattgatggatttttagctattgcaaagatttcagcatgccaccatcttgaagatgtactagatgatttggttgtgtctctctgtaagttcacaactctgttaaacccatcatcagttgaggaacctgtgctagcctttggtgatgacacaaaagctaggatgtcaactgtgacagttttcaccattgccaataggtatggtgattatattcgcactggttggagaaatattctggactgcatcttaagattgcacaagcttggtcttcttcctgctcgtgtggctagtgatgcagctgatgagtcagagttttctgctgacgcaggtcctggcaagccaataacaaattctctatcttctgttcacatgcctactgtgggtactcctaggagatcttctggattgatgggtcggtttagtcagctcttatctcttgacacagaggagccgagatcacagcccactgaacaacaacttgctgctcatcaacgtacccttcagactattcaaaagtgccacattgacggcatatttactgagagcaaatttctgcaggctgaatccttgttacagcttgcacgtgcattgatttgggcagcagggcgaccgcagaaagggaatagctctccggaggatgaagataccgctgttttctgtttggaattgctgattgctattaccctaaataatagggataggattgtgcttctttggcagggtgtgtatgagcacatatcaaacattgttcagtcaactgtgatgccttgtgccctggtagaaaaggctgtttttggacttcttagaatttgccagcggctgcttccctacaaagaaaaccttgctgatgaactgctgaggtccctgcagcttgtcttaaagcttgatgctcgggtcgccgatgcatactgtgagcaaattactctggaagtcagtcgccttgtgaaagcaaatgcctctcacatcagatcctcgttagggtggcgcacaattacatccctaatctccatcacggcccgccaccccgaagcttctgaggctgggtttgacacactgtccttcattatgtctgatggaacccacttgttgccagccaattatactctatgtgttgatgcgtcgaggcagtttgctgagtctcgtgttgggcagacagagcgatctgtgatcgcattagatcttatggcaggttctgttgattgtttggtaaggtgggcccacgaggctaagcaagctactaatgaggatgaagctgtgaaaatgtctcaggatattggggaaatgtggttgcggcttattcaggggttgagaaaagtttgtttggaccaaagagaagaggttaggaaccatgctttgtcattgttgcagaagtgcttgacagaagttgatgggatccctcttccacaaggtctgtggttacagtgctttgaacttgtaatgttcacaatgcttgatgacttgcttgaaattgcacaaggacactcccaaaaggactaccggaacatggaaggcacacttatctctgccatgaagctcttgtccaaagtgtttctgcagctactatctgacctgtcacaattaacaaccttctgcaaactatggctgggtgttctcagtcgaatggaaaaatatatgaaggtgaaagttagagggaaaaaaagtgacaagcttcaggaccaagtaccagaactacttaagaacaccttggttgtgatgaatttgaagggagtgcttgttcagaggagtgctttaggaggagatagcttgtgggagctaacatggttacatgtaaacaacatttctccatccttgcaatcagaggttttccctgatcaaactttggagcagtcagagaccaagacaggcgaaactgggggaagcctagtatctgatgaagcgggtaaagtagctccaactgaaacgatgtcctctgaagtttctggcactggaggttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0000281 GO:0000578 GO:0000902 GO:0000910 GO:0000911 GO:0001736 GO:0001738 GO:0002009 GO:0003006 GO:0003674 GO:0005085 GO:0005086 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0007049 GO:0007155 GO:0007164 GO:0007275 GO:0007389 GO:0008150 GO:0009605 GO:0009606 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009826 GO:0009880 GO:0009888 GO:0009914 GO:0009926 GO:0009942 GO:0009987 GO:0010008 GO:0010015 GO:0010053 GO:0010054 GO:0010087 GO:0010101 GO:0010102 GO:0010154 GO:0010274 GO:0010311 GO:0010540 GO:0010817 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016197 GO:0019899 GO:0021700 GO:0022402 GO:0022414 GO:0022610 GO:0022622 GO:0030154 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032506 GO:0032509 GO:0032879 GO:0032989 GO:0040007 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0046907 GO:0046983 GO:0048209 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048646 GO:0048729 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051179 GO:0051234 GO:0051301 GO:0051641 GO:0051649 GO:0060341 GO:0060429 GO:0060560 GO:0060627 GO:0060918 GO:0061458 GO:0061640 GO:0065007 GO:0065008 GO:0065009 GO:0071554 GO:0071555 GO:0071695 GO:0071840 GO:0071944 GO:0071985 GO:0090558 GO:0090627 GO:0090696 GO:0090697 GO:0090698 GO:0097708 GO:0098588 GO:0098657 GO:0098772 GO:0098791 GO:0098805 GO:0099402 GO:1902410 GO:1903047 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
Sec7 Sec7_N

Protein Analysis

675

Amino Acids

74.72

Weight (kDa)

5.4

Isoelectric Point (pI)

51.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_28 PF23325 453 - 604 2.5e-13 GBF1-like, tetratrico peptide repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0028874)

Species Orthologous Gene IDs
malus_domestica MD07G1202900.v1.1
rosa_multiflora Rmu_sc0006033.1_g000002

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 389, 1250
AccIII TCCGGA 1 cut(s) 703
AciI CCGC 6 cut(s) 683, 720, 889, 1090, 1363, 1970
AclWI GGATC 3 cut(s) 1035, 1459, 1472
AcsI RAATTY 4 cut(s) 421, 620, 879, 1789
AcuI CTGAAG 3 cut(s) 557, 1727, 2025
AcvI CACGTG 1 cut(s) 656
AfaI GTAC 4 cut(s) 132, 457, 568, 1755
AfiI CCNNNNNNNGG 4 cut(s) 452, 689, 1050, 1576
AflII CTTAAG 2 cut(s) 319, 1766
AflIII ACRYGT 1 cut(s) 1858
AgsI TTSAA 5 cut(s) 125, 584, 1502, 1538, 1795
AhdI GACNNNNNGTC 1 cut(s) 1126
AjnI CCWGG 2 cut(s) 403, 846
AjuI GAANNNNNNNTTGG 2 cut(s) 406, 438
AloI GAACNNNNNNTCC 2 cut(s) 1791, 1823
Alw21I GWGCWC 1 cut(s) 807
Alw26I GTCTC 4 cut(s) 156, 1215, 1341, 1919
AlwI GGATC 3 cut(s) 1035, 1459, 1472
AlwNI CAGNNNCTG 3 cut(s) 404, 892, 1265
Ama87I CYCGRG 1 cut(s) 963
Aor13HI TCCGGA 1 cut(s) 703
AoxI GGCC 3 cut(s) 7, 1086, 1287
ApaI GGGCCC 1 cut(s) 1291
ApeKI GCWGC 7 cut(s) 20, 368, 554, 671, 892, 940, 1627
ApoI RAATTY 4 cut(s) 421, 620, 879, 1789
AspA2I CCTAGG 1 cut(s) 461
AspLEI GCGC 1 cut(s) 1059
AspS9I GGNCC 8 cut(s) 8, 401, 933, 1087, 1287, 1288, 1396, 1747
AsuHPI GGTGA 4 cut(s) 227, 247, 287, 1723
AsuNHI GCTAGC 1 cut(s) 205
AvaI CYCGRG 1 cut(s) 963
AvaII GGWCC 4 cut(s) 401, 933, 1396, 1747
AvrII CCTAGG 1 cut(s) 461
BaeGI GKGCMC 2 cut(s) 847, 1291
BaeI ACNNNNGTAYC 2 cut(s) 708, 741
BamHI GGATCC 1 cut(s) 1464
BanII GRGCYC 1 cut(s) 1291
BauI CACGAG 3 cut(s) 351, 1212, 1292
BbrPI CACGTG 1 cut(s) 656
BbsI GAAGAC 1 cut(s) 332
Bbv12I GWGCWC 1 cut(s) 807
BbvCI CCTCAGC 1 cut(s) 929
BbvI GCAGC 7 cut(s) 7, 380, 541, 683, 879, 952, 1639
BccI CCATC 9 cut(s) 32, 74, 126, 190, 475, 1088, 1139, 1454, 1885
BceAI ACGGC 2 cut(s) 616, 1101
BciT130I CCWGG 2 cut(s) 405, 848
BclI TGATCA 2 cut(s) 40, 1903
BcoDI GTCTC 4 cut(s) 156, 1215, 1341, 1919
BfaI CTAG 6 cut(s) 134, 206, 231, 360, 462, 1955
BfmI CTRYAG 3 cut(s) 626, 938, 1625
BfrI CTTAAG 2 cut(s) 319, 1766
BfuAI ACCTGC 2 cut(s) 389, 1250
BglI GCCNNNNNGGC 1 cut(s) 1295
BglII AGATCT 2 cut(s) 467, 1249
BisI GCNGC 9 cut(s) 21, 369, 555, 672, 890, 893, 941, 1364, 1628
BlnI CCTAGG 1 cut(s) 461
BlpI GCTNAGC 1 cut(s) 1299
BlsI GCNGC 9 cut(s) 22, 370, 556, 673, 891, 894, 942, 1365, 1629
Bme1390I CCNGG 2 cut(s) 405, 848
Bme18I GGWCC 4 cut(s) 401, 933, 1396, 1747
BmeRI GACNNNNNGTC 1 cut(s) 1126
BmeT110I CYCGRG 1 cut(s) 963
BmgT120I GGNCC 8 cut(s) 8, 401, 933, 1087, 1287, 1288, 1396, 1747
BmiI GGNNCC 7 cut(s) 198, 522, 935, 1150, 1289, 1418, 1466
BmrFI CCNGG 2 cut(s) 405, 848
BmrI ACTGGG 1 cut(s) 1953
BmsI GCATC 6 cut(s) 324, 355, 825, 949, 964, 1177
BmtI GCTAGC 1 cut(s) 209
BmuI ACTGGG 1 cut(s) 1953
BoxI GACNNNNGTC 1 cut(s) 399
BpiI GAAGAC 1 cut(s) 332
Bpu10I CCTNAGC 1 cut(s) 929
Bpu1102I GCTNAGC 1 cut(s) 1299
BsaAI YACGTR 1 cut(s) 656
BsaI GGTCTC 1 cut(s) 1919
BsaJI CCNNGG 3 cut(s) 461, 846, 1776
BsaWI WCCGGW 2 cut(s) 703, 1569
BsaXI ACNNNNNCTCC 2 cut(s) 1791, 1821
Bsc4I CCNNNNNNNGG 4 cut(s) 452, 689, 1050, 1576
Bse1I ACTGG 3 cut(s) 295, 1948, 2023
Bse3DI GCAATG 1 cut(s) 258
BseAI TCCGGA 1 cut(s) 703
BseBI CCWGG 2 cut(s) 405, 848
BseDI CCNNGG 3 cut(s) 461, 846, 1776
BseGI GGATG 5 cut(s) 240, 715, 1067, 1324, 1877
BseLI CCNNNNNNNGG 4 cut(s) 452, 689, 1050, 1576
BseMI GCAATG 1 cut(s) 258
BseMII CTCAG 6 cut(s) 603, 920, 1098, 1197, 1352, 1699
BseNI ACTGG 3 cut(s) 295, 1948, 2023
BseRI GAGGAG 3 cut(s) 533, 1828, 1842
BseSI GKGCMC 2 cut(s) 847, 1291
BseXI GCAGC 7 cut(s) 7, 380, 541, 683, 879, 952, 1639
BseYI CCCAGC 2 cut(s) 1112, 1675
Bsh1285I CGRYCG 1 cut(s) 683
BshFI GGCC 3 cut(s) 9, 1088, 1289
BsiEI CGRYCG 1 cut(s) 683
BsiHKAI GWGCWC 1 cut(s) 807
BsiHKCI CYCGRG 1 cut(s) 963
BsiSI CCGG 2 cut(s) 704, 1570
BslFI GGGAC 1 cut(s) 919
BslI CCNNNNNNNGG 4 cut(s) 452, 689, 1050, 1576
BsmAI GTCTC 4 cut(s) 156, 1215, 1341, 1919
BsmFI GGGAC 1 cut(s) 919
BsnI GGCC 3 cut(s) 9, 1088, 1289
Bso31I GGTCTC 1 cut(s) 1919
BsoBI CYCGRG 1 cut(s) 963
Bsp120I GGGCCC 1 cut(s) 1287
Bsp1286I GDGCHC 3 cut(s) 807, 847, 1291
Bsp13I TCCGGA 1 cut(s) 703
Bsp143I GATC 9 cut(s) 40, 467, 527, 1040, 1232, 1239, 1249, 1464, 1903
Bsp1720I GCTNAGC 1 cut(s) 1299
BspACI CCGC 6 cut(s) 683, 720, 889, 1090, 1363, 1970
BspANI GGCC 3 cut(s) 9, 1088, 1289
BspCNI CTCAG 6 cut(s) 604, 921, 1099, 1198, 1351, 1698
BspEI TCCGGA 1 cut(s) 703
BspLI GGNNCC 7 cut(s) 198, 522, 935, 1150, 1289, 1418, 1466
BspMAI CTGCAG 3 cut(s) 630, 942, 1629
BspMI ACCTGC 2 cut(s) 389, 1250
BspOI GCTAGC 1 cut(s) 209
BspPI GGATC 3 cut(s) 1035, 1459, 1472
BspTI CTTAAG 2 cut(s) 319, 1766
BspTNI GGTCTC 1 cut(s) 1919
BsrDI GCAATG 1 cut(s) 258
BsrI ACTGG 3 cut(s) 295, 1948, 2023
BssECI CCNNGG 3 cut(s) 461, 846, 1776
BssMI GATC 9 cut(s) 40, 467, 527, 1040, 1232, 1239, 1249, 1464, 1903
BssSI CACGAG 3 cut(s) 351, 1212, 1292
BssT1I CCWWGG 2 cut(s) 461, 1776
Bst2BI CACGAG 3 cut(s) 351, 1212, 1292
Bst2UI CCWGG 2 cut(s) 405, 848
Bst4CI ACNGT 7 cut(s) 244, 250, 451, 832, 983, 1128, 1494
Bst6I CTCTTC 3 cut(s) 51, 1401, 1476
BstAFI CTTAAG 2 cut(s) 319, 1766
BstBAI YACGTR 1 cut(s) 656
BstC8I GCNNGC 9 cut(s) 112, 207, 410, 630, 651, 887, 1090, 1164, 1305
BstDEI CTNAG 8 cut(s) 612, 875, 929, 1107, 1206, 1299, 1338, 1685
BstF5I GGATG 5 cut(s) 240, 715, 1067, 1324, 1877
BstHHI GCGC 1 cut(s) 1059
BstKTI GATC 9 cut(s) 43, 470, 530, 1043, 1235, 1242, 1252, 1467, 1906
BstMAI GTCTC 4 cut(s) 156, 1215, 1341, 1919
BstMBI GATC 9 cut(s) 40, 467, 527, 1040, 1232, 1239, 1249, 1464, 1903
BstMCI CGRYCG 1 cut(s) 683
BstMWI GCNNNNNNNGC 8 cut(s) 356, 365, 787, 968, 1109, 1228, 1295, 1304
BstNI CCWGG 2 cut(s) 405, 848
BstNSI RCATGY 4 cut(s) 75, 114, 445, 1862
BstPAI GACNNNNGTC 1 cut(s) 399
BstSCI CCNGG 2 cut(s) 403, 846
BstSFI CTRYAG 3 cut(s) 626, 938, 1625
BstSLI GKGCMC 2 cut(s) 847, 1291
BstV1I GCAGC 7 cut(s) 7, 380, 541, 683, 879, 952, 1639
BstV2I GAAGAC 1 cut(s) 332
BstX2I RGATCY 4 cut(s) 467, 1040, 1249, 1464
BstXI CCANNNNNNTGG 1 cut(s) 31
BstYI RGATCY 4 cut(s) 467, 1040, 1249, 1464
BsuRI GGCC 3 cut(s) 9, 1088, 1289
BtsCI GGATG 5 cut(s) 240, 715, 1067, 1324, 1877
BtsIMutI CAGTG 5 cut(s) 288, 537, 1124, 1499, 2016
BveI ACCTGC 2 cut(s) 389, 1250
Cac8I GCNNGC 9 cut(s) 112, 207, 410, 630, 651, 887, 1090, 1164, 1305
CaiI CAGNNNCTG 3 cut(s) 404, 892, 1265
CfoI GCGC 1 cut(s) 1059
Cfr13I GGNCC 8 cut(s) 8, 401, 933, 1087, 1287, 1288, 1396, 1747
CseI GACGC 2 cut(s) 404, 1179
Csp6I GTAC 4 cut(s) 131, 456, 567, 1754
CspCI CAANNNNNGTGG 2 cut(s) 1466, 1501
CviAII CATG 9 cut(s) 53, 72, 111, 442, 1421, 1576, 1600, 1851, 1859
CviQI GTAC 4 cut(s) 131, 456, 567, 1754
DdeI CTNAG 8 cut(s) 612, 875, 929, 1107, 1206, 1299, 1338, 1685
DpnI GATC 9 cut(s) 42, 469, 529, 1042, 1234, 1241, 1251, 1466, 1905
DpnII GATC 9 cut(s) 40, 467, 527, 1040, 1232, 1239, 1249, 1464, 1903
DriI GACNNNNNGTC 1 cut(s) 1126
Eam1104I CTCTTC 3 cut(s) 51, 1401, 1476
Eam1105I GACNNNNNGTC 1 cut(s) 1126
EarI CTCTTC 3 cut(s) 51, 1401, 1476
Eco130I CCWWGG 2 cut(s) 461, 1776
Eco24I GRGCYC 1 cut(s) 1291
Eco31I GGTCTC 1 cut(s) 1919
Eco47I GGWCC 4 cut(s) 401, 933, 1396, 1747
Eco57I CTGAAG 3 cut(s) 557, 1727, 2025
Eco72I CACGTG 1 cut(s) 656
Eco88I CYCGRG 1 cut(s) 963
EcoO109I RGGNCCY 2 cut(s) 401, 933
EcoRII CCWGG 2 cut(s) 403, 846
EcoT14I CCWWGG 2 cut(s) 461, 1776
EcoT22I ATGCAT 2 cut(s) 77, 979
EcoT38I GRGCYC 1 cut(s) 1291
ErhI CCWWGG 2 cut(s) 461, 1776
FaeI CATG 9 cut(s) 56, 75, 114, 445, 1424, 1579, 1603, 1854, 1862
FalI AAGNNNNNCTT 6 cut(s) 897, 929, 1572, 1604, 1760, 1792
FaqI GGGAC 1 cut(s) 919
FatI CATG 9 cut(s) 52, 71, 110, 441, 1420, 1575, 1599, 1850, 1858
FauI CCCGC 2 cut(s) 1097, 1963
FbaI TGATCA 2 cut(s) 40, 1903
Fnu4HI GCNGC 9 cut(s) 21, 369, 555, 672, 890, 893, 941, 1364, 1628
FokI GGATG 5 cut(s) 247, 722, 1054, 1331, 1864
FriOI GRGCYC 1 cut(s) 1291
Fsp4HI GCNGC 9 cut(s) 21, 369, 555, 672, 890, 893, 941, 1364, 1628
FspBI CTAG 6 cut(s) 134, 206, 231, 360, 462, 1955
GlaI GCGC 1 cut(s) 1058
GluI GCNGC 9 cut(s) 21, 369, 555, 672, 890, 893, 941, 1364, 1628
GsaI CCCAGC 2 cut(s) 1116, 1679
HaeIII GGCC 3 cut(s) 9, 1088, 1289
HapII CCGG 2 cut(s) 704, 1570
HgaI GACGC 2 cut(s) 404, 1179
HhaI GCGC 1 cut(s) 1059
Hin1II CATG 9 cut(s) 56, 75, 114, 445, 1424, 1579, 1603, 1854, 1862
Hin6I GCGC 1 cut(s) 1057
HinP1I GCGC 1 cut(s) 1057
HincII GTYRAC 2 cut(s) 240, 828
HindII GTYRAC 2 cut(s) 240, 828
HindIII AAGCTT 4 cut(s) 332, 953, 1101, 1739
HinfI GANTC 3 cut(s) 377, 635, 1208
HpaII CCGG 2 cut(s) 704, 1570
HphI GGTGA 4 cut(s) 227, 247, 287, 1723
Hpy166II GTNNAC 6 cut(s) 165, 240, 439, 828, 1515, 1864
Hpy188III TCNNGA 8 cut(s) 122, 308, 474, 509, 704, 998, 1340, 1745
Hpy8I GTNNAC 6 cut(s) 165, 240, 439, 828, 1515, 1864
Hpy99I CGWCG 1 cut(s) 1195
HpyAV CCTTC 6 cut(s) 581, 1141, 1574, 1669, 1702, 1789
HpyCH4III ACNGT 7 cut(s) 244, 250, 451, 832, 983, 1128, 1494
HpyCH4IV ACGT 2 cut(s) 565, 655
HpyF10VI GCNNNNNNNGC 8 cut(s) 356, 365, 787, 968, 1109, 1228, 1295, 1304
HpyF3I CTNAG 8 cut(s) 612, 875, 929, 1107, 1206, 1299, 1338, 1685
HpySE526I ACGT 2 cut(s) 565, 655
Hsp92II CATG 9 cut(s) 56, 75, 114, 445, 1424, 1579, 1603, 1854, 1862
HspAI GCGC 1 cut(s) 1057
Kpn2I TCCGGA 1 cut(s) 703
Ksp22I TGATCA 2 cut(s) 40, 1903
Kzo9I GATC 9 cut(s) 40, 467, 527, 1040, 1232, 1239, 1249, 1464, 1903
LmnI GCTCC 4 cut(s) 520, 1843, 1915, 1987
Lsp1109I GCAGC 7 cut(s) 7, 380, 541, 683, 879, 952, 1639
LweI GCATC 6 cut(s) 324, 355, 825, 949, 964, 1177
MaeI CTAG 6 cut(s) 134, 206, 231, 360, 462, 1955
MaeII ACGT 2 cut(s) 565, 655
MaeIII GTNAC 6 cut(s) 244, 642, 1488, 1644, 1733, 1854
MalI GATC 9 cut(s) 42, 469, 529, 1042, 1234, 1241, 1251, 1466, 1905
MboI GATC 9 cut(s) 40, 467, 527, 1040, 1232, 1239, 1249, 1464, 1903
MboII GAAGA 9 cut(s) 68, 137, 332, 335, 423, 462, 725, 1418, 1463
MfeI CAATTG 1 cut(s) 15
MflI RGATCY 4 cut(s) 467, 1040, 1249, 1464
MhlI GDGCHC 3 cut(s) 807, 847, 1291
MlyI GAGTC 2 cut(s) 386, 1217
MmeI TCCRAC 2 cut(s) 275, 2009
Mph1103I ATGCAT 2 cut(s) 77, 979
MroI TCCGGA 1 cut(s) 703
MseI TTAA 5 cut(s) 176, 320, 950, 1652, 1767
MslI CAYNNNNRTG 1 cut(s) 29
MspA1I CMGCKG 3 cut(s) 371, 722, 889
MspCI CTTAAG 2 cut(s) 319, 1766
MspI CCGG 2 cut(s) 704, 1570
MspR9I CCNGG 2 cut(s) 405, 848
MunI CAATTG 1 cut(s) 15
MvaI CCWGG 2 cut(s) 405, 848
MwoI GCNNNNNNNGC 8 cut(s) 356, 365, 787, 968, 1109, 1228, 1295, 1304
NdeII GATC 9 cut(s) 40, 467, 527, 1040, 1232, 1239, 1249, 1464, 1903
NheI GCTAGC 1 cut(s) 205
NlaIII CATG 9 cut(s) 56, 75, 114, 445, 1424, 1579, 1603, 1854, 1862
NlaIV GGNNCC 7 cut(s) 198, 522, 935, 1150, 1289, 1418, 1466
NmeAIII GCCGAG 1 cut(s) 549
NmuCI GTSAC 3 cut(s) 244, 1644, 1733
NsiI ATGCAT 2 cut(s) 77, 979
NspI RCATGY 4 cut(s) 75, 114, 445, 1862
PaeI GCATGC 1 cut(s) 114
PciI ACATGT 1 cut(s) 1858
PfeI GAWTC 1 cut(s) 635
PkrI GCNGC 9 cut(s) 22, 370, 556, 673, 891, 894, 942, 1365, 1629
PleI GAGTC 2 cut(s) 385, 1216
PmaCI CACGTG 1 cut(s) 656
PmlI CACGTG 1 cut(s) 656
PpsI GAGTC 2 cut(s) 385, 1216
Ppu21I YACGTR 1 cut(s) 656
PpuMI RGGWCCY 2 cut(s) 401, 933
PscI ACATGT 1 cut(s) 1858
PshAI GACNNNNGTC 1 cut(s) 399
Psp5II RGGWCCY 2 cut(s) 401, 933
Psp6I CCWGG 2 cut(s) 403, 846
PspCI CACGTG 1 cut(s) 656
PspFI CCCAGC 2 cut(s) 1112, 1675
PspGI CCWGG 2 cut(s) 403, 846
PspN4I GGNNCC 7 cut(s) 198, 522, 935, 1150, 1289, 1418, 1466
PspOMI GGGCCC 1 cut(s) 1287
PspPI GGNCC 8 cut(s) 8, 401, 933, 1087, 1287, 1288, 1396, 1747
PspPPI RGGWCCY 2 cut(s) 401, 933
PstI CTGCAG 3 cut(s) 630, 942, 1629
PstNI CAGNNNCTG 3 cut(s) 404, 892, 1265
PsuI RGATCY 4 cut(s) 467, 1040, 1249, 1464
PvuII CAGCTG 1 cut(s) 371
RsaI GTAC 4 cut(s) 132, 457, 568, 1755
RsaNI GTAC 4 cut(s) 131, 456, 567, 1754
RseI CAYNNNNRTG 1 cut(s) 29
SaqAI TTAA 5 cut(s) 176, 320, 950, 1652, 1767
SatI GCNGC 9 cut(s) 21, 369, 555, 672, 890, 893, 941, 1364, 1628
Sau3AI GATC 9 cut(s) 40, 467, 527, 1040, 1232, 1239, 1249, 1464, 1903
Sau96I GGNCC 8 cut(s) 8, 401, 933, 1087, 1287, 1288, 1396, 1747
SchI GAGTC 2 cut(s) 386, 1217
ScrFI CCNGG 2 cut(s) 405, 848
SduI GDGCHC 3 cut(s) 807, 847, 1291
SfaNI GCATC 6 cut(s) 324, 355, 825, 949, 964, 1177
SfcI CTRYAG 3 cut(s) 626, 938, 1625
SinI GGWCC 4 cut(s) 401, 933, 1396, 1747
SmiMI CAYNNNNRTG 1 cut(s) 29
SmlI CTYRAG 2 cut(s) 319, 1766
SmoI CTYRAG 2 cut(s) 319, 1766
SphI GCATGC 1 cut(s) 114
SsiI CCGC 6 cut(s) 683, 720, 889, 1090, 1363, 1970
SspI AATATT 1 cut(s) 304
SspMI CTAG 6 cut(s) 134, 206, 231, 360, 462, 1955
StyD4I CCNGG 2 cut(s) 403, 846
StyI CCWWGG 2 cut(s) 461, 1776
TaaI ACNGT 7 cut(s) 244, 250, 451, 832, 983, 1128, 1494
TaiI ACGT 2 cut(s) 568, 658
TaqI TCGA 2 cut(s) 1193, 1690
TatI WGTACW 1 cut(s) 130
TauI GCSGC 2 cut(s) 892, 1366
TfiI GAWTC 1 cut(s) 635
Tru1I TTAA 5 cut(s) 176, 320, 950, 1652, 1767
Tru9I TTAA 5 cut(s) 176, 320, 950, 1652, 1767
TscAI CASTG 5 cut(s) 295, 544, 1131, 1499, 2023
TseFI GTSAC 3 cut(s) 244, 1644, 1733
TseI GCWGC 7 cut(s) 20, 368, 554, 671, 892, 940, 1627
Tsp45I GTSAC 3 cut(s) 244, 1644, 1733
TspDTI ATGAA 9 cut(s) 69, 726, 936, 1123, 1335, 1616, 1721, 1802, 1980
TspRI CASTG 5 cut(s) 295, 544, 1131, 1499, 2023
Vha464I CTTAAG 2 cut(s) 319, 1766
VpaK11BI GGWCC 4 cut(s) 401, 933, 1396, 1747
XapI RAATTY 4 cut(s) 421, 620, 879, 1789
XceI RCATGY 4 cut(s) 75, 114, 445, 1862
XcmI CCANNNNNNNNNTGG 1 cut(s) 1482
XmaJI CCTAGG 1 cut(s) 461
XspI CTAG 6 cut(s) 134, 206, 231, 360, 462, 1955
Zsp2I ATGCAT 2 cut(s) 77, 979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.