Rmu_sc0006964.1_g000004

Serine aminopeptidase, S33

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006964.1
Physical Location & Seq
Reverse (-)
21971 .. 24341
2371 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 390 bp
atgaatcggagacaagtggaatgggagaagaaaagaatcggaggtgatgttgtgctcctatatgcttccaagttgcaagaaattcctaccgttgtcaatgtttctgggtgttatgatctgaagagaggccgtaaagaacgcttgggagaagactttatgcaaagaatcaagaaggaaggattcattgatgttcagcatcagcgtggaagttatcgtgtgactgaggaaagtttgatggatcgcctaagtacagatatccatgaagcatgccttcagattgacaaagattttcgggtgttaactgtccacgggtctgctgatgaaaccgtcgctgttgaagacgcattagagtttgccaagattatacttaccacaaattacataccatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

129

Amino Acids

14.9

Weight (kDa)

5.94

Isoelectric Point (pI)

35.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031381)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0006964.1_g000004
rosa_samantha Rh2AG084100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 246
AcsI RAATTY 1 cut(s) 81
AcuI CTGAAG 2 cut(s) 140, 257
AfaI GTAC 1 cut(s) 250
AgsI TTSAA 1 cut(s) 338
Alw21I GWGCWC 1 cut(s) 57
Alw26I GTCTC 1 cut(s) 4
AlwI GGATC 1 cut(s) 246
AoxI GGCC 1 cut(s) 127
ApoI RAATTY 1 cut(s) 81
AsuHPI GGTGA 1 cut(s) 56
BbsI GAAGAC 2 cut(s) 156, 345
Bbv12I GWGCWC 1 cut(s) 57
BccI CCATC 1 cut(s) 229
BceAI ACGGC 1 cut(s) 114
BcoDI GTCTC 1 cut(s) 4
BmsI GCATC 1 cut(s) 205
BpiI GAAGAC 2 cut(s) 156, 345
BsaJI CCNNGG 1 cut(s) 307
BsaXI ACNNNNNCTCC 2 cut(s) 33, 63
BseDI CCNNGG 1 cut(s) 307
BseMII CTCAG 1 cut(s) 213
BshFI GGCC 1 cut(s) 129
BsiHKAI GWGCWC 1 cut(s) 57
BsmAI GTCTC 1 cut(s) 4
BsnI GGCC 1 cut(s) 129
Bsp1286I GDGCHC 1 cut(s) 57
Bsp143I GATC 2 cut(s) 115, 238
BspANI GGCC 1 cut(s) 129
BspCNI CTCAG 1 cut(s) 214
BspPI GGATC 1 cut(s) 246
BssECI CCNNGG 1 cut(s) 307
BssMI GATC 2 cut(s) 115, 238
Bst4CI ACNGT 3 cut(s) 91, 304, 328
Bst6I CTCTTC 1 cut(s) 116
BstC8I GCNNGC 1 cut(s) 268
BstDEI CTNAG 2 cut(s) 222, 245
BstDSI CCRYGG 1 cut(s) 307
BstKTI GATC 2 cut(s) 118, 241
BstMAI GTCTC 1 cut(s) 4
BstMBI GATC 2 cut(s) 115, 238
BstNSI RCATGY 1 cut(s) 270
BstV2I GAAGAC 2 cut(s) 156, 345
BsuRI GGCC 1 cut(s) 129
BtgI CCRYGG 1 cut(s) 307
Cac8I GCNNGC 1 cut(s) 268
CseI GACGC 1 cut(s) 350
Csp6I GTAC 1 cut(s) 249
CviAII CATG 2 cut(s) 260, 267
CviJI RGCY 1 cut(s) 129
CviKI_1 RGCY 1 cut(s) 129
CviQI GTAC 1 cut(s) 249
DdeI CTNAG 2 cut(s) 222, 245
DpnI GATC 2 cut(s) 117, 240
DpnII GATC 2 cut(s) 115, 238
Eam1104I CTCTTC 1 cut(s) 116
EarI CTCTTC 1 cut(s) 116
Eco32I GATATC 1 cut(s) 256
Eco57I CTGAAG 2 cut(s) 140, 257
EcoRV GATATC 1 cut(s) 256
FaeI CATG 2 cut(s) 263, 270
FaiI YATR 9 cut(s) 61, 63, 114, 158, 261, 268, 365, 383, 388
FalI AAGNNNNNCTT 2 cut(s) 255, 287
FatI CATG 2 cut(s) 259, 266
HaeIII GGCC 1 cut(s) 129
HgaI GACGC 1 cut(s) 350
Hin1II CATG 2 cut(s) 263, 270
HincII GTYRAC 1 cut(s) 300
HindII GTYRAC 1 cut(s) 300
HinfI GANTC 4 cut(s) 4, 36, 165, 180
HpaI GTTAAC 1 cut(s) 300
HphI GGTGA 1 cut(s) 56
Hpy166II GTNNAC 2 cut(s) 300, 307
Hpy188I TCNGA 4 cut(s) 9, 41, 120, 276
Hpy188III TCNNGA 1 cut(s) 169
Hpy8I GTNNAC 2 cut(s) 300, 307
Hpy99I CGWCG 1 cut(s) 332
HpyAV CCTTC 3 cut(s) 166, 170, 281
HpyCH4III ACNGT 3 cut(s) 91, 304, 328
HpyCH4V TGCA 2 cut(s) 76, 160
HpyF3I CTNAG 2 cut(s) 222, 245
Hsp92II CATG 2 cut(s) 263, 270
KspAI GTTAAC 1 cut(s) 300
Kzo9I GATC 2 cut(s) 115, 238
LmnI GCTCC 1 cut(s) 60
LpnPI CCDG 1 cut(s) 90
LweI GCATC 1 cut(s) 205
MaeIII GTNAC 1 cut(s) 217
MalI GATC 2 cut(s) 117, 240
MboI GATC 2 cut(s) 115, 238
MboII GAAGA 4 cut(s) 40, 133, 161, 350
MhlI GDGCHC 1 cut(s) 57
MluCI AATT 2 cut(s) 81, 376
MnlI CCTC 3 cut(s) 35, 119, 217
MseI TTAA 1 cut(s) 299
MslI CAYNNNNRTG 1 cut(s) 201
NdeII GATC 2 cut(s) 115, 238
NlaIII CATG 2 cut(s) 263, 270
NmuCI GTSAC 1 cut(s) 217
NspI RCATGY 1 cut(s) 270
PaeI GCATGC 1 cut(s) 270
PfeI GAWTC 4 cut(s) 4, 36, 165, 180
RsaI GTAC 1 cut(s) 250
RsaNI GTAC 1 cut(s) 249
RseI CAYNNNNRTG 1 cut(s) 201
SaqAI TTAA 1 cut(s) 299
Sau3AI GATC 2 cut(s) 115, 238
SduI GDGCHC 1 cut(s) 57
SetI ASST 1 cut(s) 46
SfaNI GCATC 1 cut(s) 205
SmiMI CAYNNNNRTG 1 cut(s) 201
SphI GCATGC 1 cut(s) 270
Sse9I AATT 2 cut(s) 81, 376
TaaI ACNGT 3 cut(s) 91, 304, 328
TasI AATT 2 cut(s) 81, 376
TatI WGTACW 1 cut(s) 248
TfiI GAWTC 4 cut(s) 4, 36, 165, 180
Tru1I TTAA 1 cut(s) 299
Tru9I TTAA 1 cut(s) 299
TseFI GTSAC 1 cut(s) 217
Tsp45I GTSAC 1 cut(s) 217
TspDTI ATGAA 4 cut(s) 17, 172, 276, 336
XapI RAATTY 1 cut(s) 81
XceI RCATGY 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.