Rh2AG084100

Serine aminopeptidase, S33

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
7098131 .. 7099566
1436 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG084100.1

Sequence Viewer

Length: 276 bp
ATGCAAAGAATCAAGAAGGAAGGATTCATTGATGTTCAGCATCAGCGTGGAAGTTATCGTGTGACTGAGGAAAGTTTGATGGATCGCCTAAGTACAGATATCCATGAAGCATGCCTTCAGATTGACAAAGATTTTCGGGTGTTAACTGTCCACGGGTCTGCTGATGAAACCGTCGCTGTTGAAGACGCATTAGATTACCGAAGAAAGCTTGATGGATCGATGTTTAATATATGCATGTGTCATGCCTCAAAGTCGACAGACAATGCAGGGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

91

Amino Acids

10.32

Weight (kDa)

5.45

Isoelectric Point (pI)

37.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0031381)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0006964.1_g000004
rosa_samantha Rh2AG084100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 254
AclWI GGATC 2 cut(s) 90, 223
AcuI CTGAAG 1 cut(s) 101
AfaI GTAC 1 cut(s) 94
AgsI TTSAA 1 cut(s) 182
AluBI AGCT 1 cut(s) 208
AluI AGCT 1 cut(s) 208
AlwI GGATC 2 cut(s) 90, 223
BbsI GAAGAC 1 cut(s) 189
BccI CCATC 2 cut(s) 73, 206
BmsI GCATC 1 cut(s) 49
BpiI GAAGAC 1 cut(s) 189
Bsa29I ATCGAT 1 cut(s) 218
BsaJI CCNNGG 1 cut(s) 151
BseCI ATCGAT 1 cut(s) 218
BseDI CCNNGG 1 cut(s) 151
BseMII CTCAG 1 cut(s) 57
BshVI ATCGAT 1 cut(s) 218
Bsp143I GATC 2 cut(s) 82, 215
BspCNI CTCAG 1 cut(s) 58
BspDI ATCGAT 1 cut(s) 218
BspPI GGATC 2 cut(s) 90, 223
BssECI CCNNGG 1 cut(s) 151
BssMI GATC 2 cut(s) 82, 215
Bst4CI ACNGT 2 cut(s) 148, 172
BstC8I GCNNGC 1 cut(s) 112
BstDEI CTNAG 2 cut(s) 66, 89
BstDSI CCRYGG 1 cut(s) 151
BstKTI GATC 2 cut(s) 85, 218
BstMBI GATC 2 cut(s) 82, 215
BstNSI RCATGY 2 cut(s) 114, 238
BstV2I GAAGAC 1 cut(s) 189
Bsu15I ATCGAT 1 cut(s) 218
BsuTUI ATCGAT 1 cut(s) 218
BtgI CCRYGG 1 cut(s) 151
Cac8I GCNNGC 1 cut(s) 112
ClaI ATCGAT 1 cut(s) 218
CseI GACGC 1 cut(s) 194
Csp6I GTAC 1 cut(s) 93
CviAII CATG 4 cut(s) 104, 111, 235, 242
CviJI RGCY 1 cut(s) 208
CviKI_1 RGCY 1 cut(s) 208
CviQI GTAC 1 cut(s) 93
DdeI CTNAG 2 cut(s) 66, 89
DpnI GATC 2 cut(s) 84, 217
DpnII GATC 2 cut(s) 82, 215
Eco32I GATATC 1 cut(s) 100
Eco57I CTGAAG 1 cut(s) 101
EcoRV GATATC 1 cut(s) 100
EcoT22I ATGCAT 1 cut(s) 236
FaeI CATG 4 cut(s) 107, 114, 238, 245
FaiI YATR 6 cut(s) 105, 112, 230, 232, 236, 243
FalI AAGNNNNNCTT 2 cut(s) 99, 131
FatI CATG 4 cut(s) 103, 110, 234, 241
FblI GTMKAC 1 cut(s) 254
HgaI GACGC 1 cut(s) 194
Hin1II CATG 4 cut(s) 107, 114, 238, 245
HincII GTYRAC 2 cut(s) 144, 255
HindII GTYRAC 2 cut(s) 144, 255
HindIII AAGCTT 1 cut(s) 206
HinfI GANTC 2 cut(s) 9, 24
HpaI GTTAAC 1 cut(s) 144
Hpy166II GTNNAC 3 cut(s) 144, 151, 255
Hpy188I TCNGA 1 cut(s) 120
Hpy188III TCNNGA 2 cut(s) 13, 273
Hpy8I GTNNAC 3 cut(s) 144, 151, 255
Hpy99I CGWCG 1 cut(s) 176
HpyAV CCTTC 3 cut(s) 10, 14, 125
HpyCH4III ACNGT 2 cut(s) 148, 172
HpyCH4V TGCA 3 cut(s) 4, 234, 266
HpyF3I CTNAG 2 cut(s) 66, 89
Hsp92II CATG 4 cut(s) 107, 114, 238, 245
KspAI GTTAAC 1 cut(s) 144
Kzo9I GATC 2 cut(s) 82, 215
LpnPI CCDG 1 cut(s) 252
LweI GCATC 1 cut(s) 49
MaeIII GTNAC 1 cut(s) 61
MalI GATC 2 cut(s) 84, 217
MboI GATC 2 cut(s) 82, 215
MboII GAAGA 2 cut(s) 194, 213
MnlI CCTC 2 cut(s) 61, 256
Mph1103I ATGCAT 1 cut(s) 236
MseI TTAA 2 cut(s) 143, 225
MslI CAYNNNNRTG 1 cut(s) 45
NdeII GATC 2 cut(s) 82, 215
NlaIII CATG 4 cut(s) 107, 114, 238, 245
NmuCI GTSAC 1 cut(s) 61
NsiI ATGCAT 1 cut(s) 236
NspI RCATGY 2 cut(s) 114, 238
PaeI GCATGC 1 cut(s) 114
PfeI GAWTC 2 cut(s) 9, 24
RsaI GTAC 1 cut(s) 94
RsaNI GTAC 1 cut(s) 93
RseI CAYNNNNRTG 1 cut(s) 45
SalI GTCGAC 1 cut(s) 253
SaqAI TTAA 2 cut(s) 143, 225
Sau3AI GATC 2 cut(s) 82, 215
SetI ASST 1 cut(s) 210
SfaNI GCATC 1 cut(s) 49
SmiMI CAYNNNNRTG 1 cut(s) 45
SphI GCATGC 1 cut(s) 114
TaaI ACNGT 2 cut(s) 148, 172
TaqI TCGA 2 cut(s) 218, 254
TatI WGTACW 1 cut(s) 92
TfiI GAWTC 2 cut(s) 9, 24
Tru1I TTAA 2 cut(s) 143, 225
Tru9I TTAA 2 cut(s) 143, 225
TseFI GTSAC 1 cut(s) 61
Tsp45I GTSAC 1 cut(s) 61
TspDTI ATGAA 3 cut(s) 16, 120, 180
XceI RCATGY 2 cut(s) 114, 238
XmiI GTMKAC 1 cut(s) 254
Zsp2I ATGCAT 1 cut(s) 236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.