Rmu_sc0009114.1_g000014

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009114.1
OG0031031
Physical Location & Seq
Forward (+)
45372 .. 48961
3590 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009114.1_g000014.1.cds

Sequence Viewer

Length: 1107 bp
atgagggaggctttcacatatggtggcgtaacaaacccctcagactttctgcctgctttgaaatggtttgggagtggcgccaggtttgagaagaaggtgatggacttgagtaagaggatgaatgcgttcttgcaaggtttgattgatgagcagcagctgagtaaaactacatcaggtcagagtgaagcaagtacgatgatccaccatttactttctctgcaagaatcagagccggaatactacaccgaccaaattatcaaagggcatatactgagtggttctgatgaggagcttaccaagtacgaaaggaggttgaagaaggtccgggaatgctttgggtttggggcgtgtggcggaggagcaacagaatcgggttttgaagacataggagagatcgatcgatgggaagaaggtgtcttgagttttgacgctagaggaggctgggaagactggaagagagaagctgagaataataaaaccctatctgggttgaggttaaaagatgaggacataattggaaaagagagtaaaatttcattaaatgaatcctgttcactccgtgtttccgtgaagcagttttccaaagctggtagtaggctgcttctcaatttcagctttgaggagaatcaattcggaccaaaagccgcttctacacactttaccaaacaccatagcattagcccaaaagtagaagcaggttcaaaagcacctccaaaatcaatcccaaactgggccttattccagactgatccgtcaatcaattgtttgtttgctgatatcgtggatccacggatgggttttagagaacgcctcccatgggtaggcgattctgcaccttcctccatctcctatggagtaaacttttggcgcctcccttggtgtcacagacttcgagtacggcccatgccgcctcttcctttatctcaaagaagccgaggattggtggctactagtggctggaaggtttgggatccaaggaccccaatgaccaatgtcttcgaggtcaggattcagattaggagcggcttcggcaagtctgcagtcagattaagtcgtttcccttcatcatggatggcagcaggcatggtggaactatcttctgtctga

Protein Analysis

368

Amino Acids

41.35

Weight (kDa)

8.86

Isoelectric Point (pI)

47.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0031031)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0000015.1_g000040 Rmu_sc0009114.1_g000014

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 751
Acc36I ACCTGC 1 cut(s) 686
AccB1I GGYRCC 2 cut(s) 77, 867
AccBSI CCGCTC 1 cut(s) 1023
AciI CCGC 4 cut(s) 354, 645, 908, 1023
AclWI GGATC 6 cut(s) 193, 743, 779, 792, 965, 978
AcsI RAATTY 1 cut(s) 531
AcyI GRCGYC 2 cut(s) 78, 868
AdeI CACNNNGTG 1 cut(s) 560
AfaI GTAC 3 cut(s) 193, 302, 897
AfiI CCNNNNNNNGG 6 cut(s) 486, 730, 794, 817, 821, 940
AgsI TTSAA 4 cut(s) 61, 316, 380, 702
AhlI ACTAGT 1 cut(s) 950
AjnI CCWGG 1 cut(s) 80
AjuI GAANNNNNNNTTGG 2 cut(s) 631, 663
AluBI AGCT 5 cut(s) 157, 292, 464, 587, 615
AluI AGCT 5 cut(s) 157, 292, 464, 587, 615
AlwI GGATC 6 cut(s) 193, 743, 779, 792, 965, 978
AlwNI CAGNNNCTG 1 cut(s) 157
AoxI GGCC 2 cut(s) 732, 899
ApeKI GCWGC 4 cut(s) 151, 154, 598, 1076
ApoI RAATTY 1 cut(s) 531
Asp700I GAANNNNTTC 2 cut(s) 125, 629
AspLEI GCGC 2 cut(s) 80, 870
AspS9I GGNCC 5 cut(s) 322, 635, 732, 900, 978
AsuC2I CCSGG 1 cut(s) 326
AsuHPI GGTGA 1 cut(s) 109
AvaII GGWCC 3 cut(s) 322, 635, 978
BamHI GGATCC 2 cut(s) 784, 970
BanI GGYRCC 2 cut(s) 77, 867
BbsI GAAGAC 3 cut(s) 387, 453, 988
BbvI GCAGC 4 cut(s) 163, 166, 585, 1088
BccI CCATC 5 cut(s) 94, 396, 787, 851, 1066
BceAI ACGGC 1 cut(s) 914
BcgI CGANNNNNNTGC 2 cut(s) 351, 385
BciT130I CCWGG 1 cut(s) 82
BcnI CCSGG 1 cut(s) 326
BcuI ACTAGT 1 cut(s) 950
BfaI CTAG 2 cut(s) 432, 951
BfmI CTRYAG 1 cut(s) 1038
BfoI RGCGCY 2 cut(s) 81, 871
BfuAI ACCTGC 1 cut(s) 686
BisI GCNGC 7 cut(s) 152, 155, 599, 645, 908, 1024, 1077
BlsI GCNGC 7 cut(s) 153, 156, 600, 646, 909, 1025, 1078
Bme1390I CCNGG 2 cut(s) 82, 326
Bme18I GGWCC 3 cut(s) 322, 635, 978
BmgT120I GGNCC 5 cut(s) 322, 635, 732, 900, 978
BmiI GGNNCC 5 cut(s) 79, 786, 869, 972, 980
BmrFI CCNGG 2 cut(s) 82, 326
BmrI ACTGGG 1 cut(s) 739
BmuI ACTGGG 1 cut(s) 739
BoxI GACNNNNGTC 1 cut(s) 992
BpiI GAAGAC 3 cut(s) 387, 453, 988
BplI GAGNNNNNCTC 2 cut(s) 795, 827
BpuEI CTTGAG 2 cut(s) 127, 439
BpuMI CCSGG 1 cut(s) 326
Bsa29I ATCGAT 2 cut(s) 396, 400
BsaHI GRCGYC 2 cut(s) 78, 868
BsaJI CCNNGG 5 cut(s) 788, 815, 875, 934, 974
Bsc4I CCNNNNNNNGG 6 cut(s) 486, 730, 794, 817, 821, 940
Bse1I ACTGG 2 cut(s) 455, 734
BseBI CCWGG 1 cut(s) 82
BseCI ATCGAT 2 cut(s) 396, 400
BseDI CCNNGG 5 cut(s) 788, 815, 875, 934, 974
BseGI GGATG 3 cut(s) 123, 798, 1077
BseLI CCNNNNNNNGG 6 cut(s) 486, 730, 794, 817, 821, 940
BseMII CTCAG 4 cut(s) 54, 149, 263, 456
BseNI ACTGG 2 cut(s) 455, 734
BseRI GAGGAG 4 cut(s) 302, 372, 450, 635
BseXI GCAGC 4 cut(s) 163, 166, 585, 1088
BseYI CCCAGC 1 cut(s) 441
BsgI GTGCAG 1 cut(s) 816
Bsh1285I CGRYCG 1 cut(s) 400
BshFI GGCC 2 cut(s) 734, 901
BshNI GGYRCC 2 cut(s) 77, 867
BshVI ATCGAT 2 cut(s) 396, 400
BsiEI CGRYCG 1 cut(s) 400
BsiSI CCGG 2 cut(s) 233, 325
BslI CCNNNNNNNGG 6 cut(s) 486, 730, 794, 817, 821, 940
BsmI GAATGC 2 cut(s) 127, 335
BsnI GGCC 2 cut(s) 734, 901
Bsp143I GATC 6 cut(s) 198, 393, 397, 748, 784, 970
Bsp19I CCATGG 1 cut(s) 815
BspACI CCGC 4 cut(s) 354, 645, 908, 1023
BspANI GGCC 2 cut(s) 734, 901
BspCNI CTCAG 4 cut(s) 53, 150, 264, 457
BspDI ATCGAT 2 cut(s) 396, 400
BspLI GGNNCC 5 cut(s) 79, 786, 869, 972, 980
BspMAI CTGCAG 1 cut(s) 1042
BspMI ACCTGC 1 cut(s) 686
BspPI GGATC 6 cut(s) 193, 743, 779, 792, 965, 978
BspT107I GGYRCC 2 cut(s) 77, 867
BsrBI CCGCTC 1 cut(s) 1023
BsrI ACTGG 2 cut(s) 455, 734
BssECI CCNNGG 5 cut(s) 788, 815, 875, 934, 974
BssMI GATC 6 cut(s) 198, 393, 397, 748, 784, 970
BssNI GRCGYC 2 cut(s) 78, 868
BssT1I CCWWGG 3 cut(s) 815, 875, 974
Bst2UI CCWGG 1 cut(s) 82
Bst6I CTCTTC 2 cut(s) 449, 918
BstACI GRCGYC 2 cut(s) 78, 868
BstC8I GCNNGC 2 cut(s) 54, 1081
BstDEI CTNAG 4 cut(s) 40, 158, 272, 465
BstDSI CCRYGG 2 cut(s) 788, 815
BstF5I GGATG 3 cut(s) 123, 798, 1077
BstH2I RGCGCY 2 cut(s) 81, 871
BstHHI GCGC 2 cut(s) 80, 870
BstKTI GATC 6 cut(s) 201, 396, 400, 751, 787, 973
BstMBI GATC 6 cut(s) 198, 393, 397, 748, 784, 970
BstMCI CGRYCG 1 cut(s) 400
BstMWI GCNNNNNNNGC 2 cut(s) 907, 1029
BstNI CCWGG 1 cut(s) 82
BstPAI GACNNNNGTC 1 cut(s) 992
BstSCI CCNGG 2 cut(s) 80, 324
BstSFI CTRYAG 1 cut(s) 1038
BstV1I GCAGC 4 cut(s) 163, 166, 585, 1088
BstV2I GAAGAC 3 cut(s) 387, 453, 988
BstX2I RGATCY 2 cut(s) 784, 970
BstYI RGATCY 2 cut(s) 784, 970
Bsu15I ATCGAT 2 cut(s) 396, 400
BsuRI GGCC 2 cut(s) 734, 901
BsuTUI ATCGAT 2 cut(s) 396, 400
BtgI CCRYGG 2 cut(s) 788, 815
BtsCI GGATG 3 cut(s) 123, 798, 1077
BveI ACCTGC 1 cut(s) 686
Cac8I GCNNGC 2 cut(s) 54, 1081
CaiI CAGNNNCTG 1 cut(s) 157
CfoI GCGC 2 cut(s) 80, 870
Cfr13I GGNCC 5 cut(s) 322, 635, 732, 900, 978
ClaI ATCGAT 2 cut(s) 396, 400
CseI GACGC 1 cut(s) 437
Csp6I GTAC 3 cut(s) 192, 301, 896
CviAII CATG 4 cut(s) 816, 904, 1068, 1084
CviQI GTAC 3 cut(s) 192, 301, 896
DdeI CTNAG 4 cut(s) 40, 158, 272, 465
DinI GGCGCC 2 cut(s) 79, 869
DpnI GATC 6 cut(s) 200, 395, 399, 750, 786, 972
DpnII GATC 6 cut(s) 198, 393, 397, 748, 784, 970
DraIII CACNNNGTG 1 cut(s) 560
DrdI GACNNNNNNGTC 1 cut(s) 751
DseDI GACNNNNNNGTC 1 cut(s) 751
Eam1104I CTCTTC 2 cut(s) 449, 918
EarI CTCTTC 2 cut(s) 449, 918
EciI GGCGGA 1 cut(s) 369
Eco130I CCWWGG 3 cut(s) 815, 875, 974
Eco32I GATATC 1 cut(s) 778
Eco47I GGWCC 3 cut(s) 322, 635, 978
EcoO109I RGGNCCY 1 cut(s) 978
EcoRII CCWGG 1 cut(s) 80
EcoRV GATATC 1 cut(s) 778
EcoT14I CCWWGG 3 cut(s) 815, 875, 974
EgeI GGCGCC 2 cut(s) 79, 869
EheI GGCGCC 2 cut(s) 79, 869
ErhI CCWWGG 3 cut(s) 815, 875, 974
FaeI CATG 4 cut(s) 819, 907, 1071, 1087
FatI CATG 4 cut(s) 815, 903, 1067, 1083
FauNDI CATATG 1 cut(s) 19
Fnu4HI GCNGC 7 cut(s) 152, 155, 599, 645, 908, 1024, 1077
FokI GGATG 3 cut(s) 130, 805, 1084
Fsp4HI GCNGC 7 cut(s) 152, 155, 599, 645, 908, 1024, 1077
FspBI CTAG 2 cut(s) 432, 951
GlaI GCGC 2 cut(s) 79, 869
GluI GCNGC 7 cut(s) 152, 155, 599, 645, 908, 1024, 1077
GsaI CCCAGC 1 cut(s) 445
HaeII RGCGCY 2 cut(s) 81, 871
HaeIII GGCC 2 cut(s) 734, 901
HapII CCGG 2 cut(s) 233, 325
HgaI GACGC 1 cut(s) 437
HhaI GCGC 2 cut(s) 80, 870
Hin1I GRCGYC 2 cut(s) 78, 868
Hin1II CATG 4 cut(s) 819, 907, 1071, 1087
Hin6I GCGC 2 cut(s) 78, 868
HinP1I GCGC 2 cut(s) 78, 868
HinfI GANTC 6 cut(s) 224, 368, 545, 625, 827, 1009
HpaII CCGG 2 cut(s) 233, 325
HphI GGTGA 1 cut(s) 109
Hpy166II GTNNAC 2 cut(s) 554, 859
Hpy188I TCNGA 8 cut(s) 43, 180, 229, 283, 635, 1014, 1046, 1106
Hpy188III TCNNGA 3 cut(s) 418, 742, 1006
Hpy8I GTNNAC 2 cut(s) 554, 859
HpyAV CCTTC 6 cut(s) 88, 313, 404, 846, 955, 1071
HpyCH4V TGCA 4 cut(s) 133, 220, 833, 1040
HpyF10VI GCNNNNNNNGC 2 cut(s) 907, 1029
HpyF3I CTNAG 4 cut(s) 40, 158, 272, 465
Hsp92I GRCGYC 2 cut(s) 78, 868
Hsp92II CATG 4 cut(s) 819, 907, 1071, 1087
HspAI GCGC 2 cut(s) 78, 868
KasI GGCGCC 2 cut(s) 77, 867
Kzo9I GATC 6 cut(s) 198, 393, 397, 748, 784, 970
LmnI GCTCC 3 cut(s) 289, 359, 1020
Lsp1109I GCAGC 4 cut(s) 163, 166, 585, 1088
MaeI CTAG 2 cut(s) 432, 951
MaeIII GTNAC 2 cut(s) 28, 881
MalI GATC 6 cut(s) 200, 395, 399, 750, 786, 972
MbiI CCGCTC 1 cut(s) 1023
MboI GATC 6 cut(s) 198, 393, 397, 748, 784, 970
MboII GAAGA 9 cut(s) 103, 328, 392, 419, 458, 466, 905, 988, 1089
MfeI CAATTG 1 cut(s) 760
MflI RGATCY 2 cut(s) 784, 970
MluCI AATT 6 cut(s) 252, 513, 531, 607, 629, 760
Mly113I GGCGCC 2 cut(s) 78, 868
MroXI GAANNNNTTC 2 cut(s) 125, 629
MseI TTAA 3 cut(s) 497, 539, 1049
MspA1I CMGCKG 1 cut(s) 157
MspI CCGG 2 cut(s) 233, 325
MspR9I CCNGG 2 cut(s) 82, 326
MunI CAATTG 1 cut(s) 760
Mva1269I GAATGC 2 cut(s) 127, 335
MvaI CCWGG 1 cut(s) 82
MwoI GCNNNNNNNGC 2 cut(s) 907, 1029
NarI GGCGCC 2 cut(s) 78, 868
NciI CCSGG 1 cut(s) 326
NcoI CCATGG 1 cut(s) 815
NdeI CATATG 1 cut(s) 19
NdeII GATC 6 cut(s) 198, 393, 397, 748, 784, 970
NlaIII CATG 4 cut(s) 819, 907, 1071, 1087
NlaIV GGNNCC 5 cut(s) 79, 786, 869, 972, 980
NmeAIII GCCGAG 1 cut(s) 959
NmuCI GTSAC 1 cut(s) 881
PctI GAATGC 2 cut(s) 127, 335
PdmI GAANNNNTTC 2 cut(s) 125, 629
PfeI GAWTC 6 cut(s) 224, 368, 545, 625, 827, 1009
PfoI TCCNGGA 1 cut(s) 324
PkrI GCNGC 7 cut(s) 153, 156, 600, 646, 909, 1025, 1078
Ple19I CGATCG 1 cut(s) 400
PluTI GGCGCC 2 cut(s) 81, 871
PpuMI RGGWCCY 1 cut(s) 978
PshAI GACNNNNGTC 1 cut(s) 992
Psp5II RGGWCCY 1 cut(s) 978
Psp6I CCWGG 1 cut(s) 80
PspFI CCCAGC 1 cut(s) 441
PspGI CCWGG 1 cut(s) 80
PspN4I GGNNCC 5 cut(s) 79, 786, 869, 972, 980
PspPI GGNCC 5 cut(s) 322, 635, 732, 900, 978
PspPPI RGGWCCY 1 cut(s) 978
PstI CTGCAG 1 cut(s) 1042
PstNI CAGNNNCTG 1 cut(s) 157
PsuI RGATCY 2 cut(s) 784, 970
PvuI CGATCG 1 cut(s) 400
PvuII CAGCTG 1 cut(s) 157
RsaI GTAC 3 cut(s) 193, 302, 897
RsaNI GTAC 3 cut(s) 192, 301, 896
SaqAI TTAA 3 cut(s) 497, 539, 1049
SatI GCNGC 7 cut(s) 152, 155, 599, 645, 908, 1024, 1077
Sau3AI GATC 6 cut(s) 198, 393, 397, 748, 784, 970
Sau96I GGNCC 5 cut(s) 322, 635, 732, 900, 978
ScrFI CCNGG 2 cut(s) 82, 326
SfcI CTRYAG 1 cut(s) 1038
SfoI GGCGCC 2 cut(s) 79, 869
SinI GGWCC 3 cut(s) 322, 635, 978
SmlI CTYRAG 2 cut(s) 106, 418
SmoI CTYRAG 2 cut(s) 106, 418
SpeI ACTAGT 1 cut(s) 950
Sse9I AATT 6 cut(s) 252, 513, 531, 607, 629, 760
SsiI CCGC 4 cut(s) 354, 645, 908, 1023
SspDI GGCGCC 2 cut(s) 77, 867
SspMI CTAG 2 cut(s) 432, 951
StyD4I CCNGG 2 cut(s) 80, 324
StyI CCWWGG 3 cut(s) 815, 875, 974
TaqI TCGA 4 cut(s) 396, 400, 892, 999
TasI AATT 6 cut(s) 252, 513, 531, 607, 629, 760
TauI GCSGC 3 cut(s) 647, 910, 1026
TfiI GAWTC 6 cut(s) 224, 368, 545, 625, 827, 1009
Tru1I TTAA 3 cut(s) 497, 539, 1049
Tru9I TTAA 3 cut(s) 497, 539, 1049
TseFI GTSAC 1 cut(s) 881
TseI GCWGC 4 cut(s) 151, 154, 598, 1076
Tsp45I GTSAC 1 cut(s) 881
TspDTI ATGAA 4 cut(s) 134, 525, 558, 1053
TspGWI ACGGA 4 cut(s) 548, 556, 741, 805
VpaK11BI GGWCC 3 cut(s) 322, 635, 978
XapI RAATTY 1 cut(s) 531
XmnI GAANNNNTTC 2 cut(s) 125, 629
XspI CTAG 2 cut(s) 432, 951
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.