Rmu_sc0017136.1_g000001

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017136.1
Physical Location & Seq
Reverse (-)
1 .. 233
233 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017136.1_g000001.1.cds

Sequence Viewer

Length: 226 bp
atgatgagtaatctgaacaaattggactttgctccattgggaacaactggctctgaatatcacaggtgggttcgtgatgtccgccagcatctccaggccgatggaatcgtggatacgattctaaagcctgggcaagacgtgctaattgttgagcaagctcaagctttggaagcaaatagagcatccttagaggaaaataaggcgaaagccatcagcctaataactc
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

8.33

Weight (kDa)

5.53

Isoelectric Point (pI)

38.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031062)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0000302.1_g000008 Rmu_sc0017136.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 82
AjiI CACGTC 1 cut(s) 139
AjnI CCWGG 2 cut(s) 93, 127
AluBI AGCT 2 cut(s) 158, 164
AluI AGCT 2 cut(s) 158, 164
AoxI GGCC 1 cut(s) 96
BccI CCATC 2 cut(s) 95, 218
BciT130I CCWGG 2 cut(s) 95, 129
BciVI GTATCC 1 cut(s) 106
BfuI GTATCC 1 cut(s) 106
Bme1390I CCNGG 2 cut(s) 95, 129
BmgBI CACGTC 1 cut(s) 139
BmrFI CCNGG 2 cut(s) 95, 129
BmsI GCATC 2 cut(s) 97, 191
BpmI CTGGAG 1 cut(s) 77
BpuEI CTTGAG 1 cut(s) 144
BsaJI CCNNGG 1 cut(s) 128
Bse1I ACTGG 1 cut(s) 52
BseBI CCWGG 2 cut(s) 95, 129
BseDI CCNNGG 1 cut(s) 128
BseGI GGATG 1 cut(s) 182
BseNI ACTGG 1 cut(s) 52
BshFI GGCC 1 cut(s) 98
BsnI GGCC 1 cut(s) 98
BspACI CCGC 1 cut(s) 82
BspANI GGCC 1 cut(s) 98
BsrI ACTGG 1 cut(s) 52
BssECI CCNNGG 1 cut(s) 128
Bst2UI CCWGG 2 cut(s) 95, 129
BstAPI GCANNNNNTGC 1 cut(s) 139
BstC8I GCNNGC 2 cut(s) 86, 156
BstDEI CTNAG 1 cut(s) 187
BstF5I GGATG 1 cut(s) 182
BstMWI GCNNNNNNNGC 3 cut(s) 139, 170, 179
BstNI CCWGG 2 cut(s) 95, 129
BstSCI CCNGG 2 cut(s) 93, 127
BstXI CCANNNNNNTGG 1 cut(s) 101
BsuI GTATCC 1 cut(s) 106
BsuRI GGCC 1 cut(s) 98
BtrI CACGTC 1 cut(s) 139
BtsCI GGATG 1 cut(s) 182
Cac8I GCNNGC 2 cut(s) 86, 156
CviJI RGCY 7 cut(s) 51, 98, 127, 158, 164, 209, 216
CviKI_1 RGCY 7 cut(s) 51, 98, 127, 158, 164, 209, 216
DdeI CTNAG 1 cut(s) 187
EciI GGCGGA 1 cut(s) 71
EcoRII CCWGG 2 cut(s) 93, 127
FokI GGATG 1 cut(s) 169
GsuI CTGGAG 1 cut(s) 77
HaeIII GGCC 1 cut(s) 98
HindIII AAGCTT 1 cut(s) 162
HinfI GANTC 2 cut(s) 105, 118
Hpy188I TCNGA 2 cut(s) 15, 55
Hpy188III TCNNGA 1 cut(s) 74
HpyCH4IV ACGT 1 cut(s) 138
HpyF10VI GCNNNNNNNGC 3 cut(s) 139, 170, 179
HpyF3I CTNAG 1 cut(s) 187
HpySE526I ACGT 1 cut(s) 138
LmnI GCTCC 1 cut(s) 37
LpnPI CCDG 7 cut(s) 33, 49, 80, 98, 107, 114, 141
LweI GCATC 2 cut(s) 97, 191
MaeII ACGT 1 cut(s) 138
MluCI AATT 2 cut(s) 20, 144
MnlI CCTC 1 cut(s) 184
MspR9I CCNGG 2 cut(s) 95, 129
MvaI CCWGG 2 cut(s) 95, 129
MwoI GCNNNNNNNGC 3 cut(s) 139, 170, 179
PfeI GAWTC 2 cut(s) 105, 118
Psp6I CCWGG 2 cut(s) 93, 127
PspGI CCWGG 2 cut(s) 93, 127
ScrFI CCNGG 2 cut(s) 95, 129
SetI ASST 4 cut(s) 68, 141, 160, 166
SfaNI GCATC 2 cut(s) 97, 191
SmlI CTYRAG 1 cut(s) 159
SmoI CTYRAG 1 cut(s) 159
Sse9I AATT 2 cut(s) 20, 144
SsiI CCGC 1 cut(s) 82
StyD4I CCNGG 2 cut(s) 93, 127
TaiI ACGT 1 cut(s) 141
TasI AATT 2 cut(s) 20, 144
TfiI GAWTC 2 cut(s) 105, 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.