Rmu_sc0019356.1_g000001
NAC Family

inactive serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019356.1
OG0031510
Physical Location & Seq
Reverse (-)
2 .. 468
467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019356.1_g000001.1.cds

Sequence Viewer

Length: 266 bp
atgttgaaattcttgaatcgagtggtgggtggatctgggagcggacccaaagatctgccttacaacatcggcgagccctatccctccgcttggggttcttggactcacttcaggggcacctccaaggacgatgggtctccggtgtccatattttccattagtggaagtaatgctcaggatggccatttggccgccgctcgcaatggcgtcaagcgtctccgtactgtcagacatcccaacatcttatcatttctccacagtactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005813 GO:0005815 GO:0005856 GO:0015630 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

88

Amino Acids

9.48

Weight (kDa)

10.27

Isoelectric Point (pI)

39.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0031510)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8047708.1_g000001 Rmu_sc0019356.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 116
AccBSI CCGCTC 2 cut(s) 42, 197
AciI CCGC 4 cut(s) 42, 87, 192, 195
AclWI GGATC 1 cut(s) 40
AcoI YGGCCR 2 cut(s) 181, 189
AcsI RAATTY 1 cut(s) 8
AcuI CTGAAG 1 cut(s) 94
AcyI GRCGYC 1 cut(s) 207
AfaI GTAC 2 cut(s) 223, 262
AfiI CCNNNNNNNGG 1 cut(s) 90
AgsI TTSAA 2 cut(s) 7, 16
AhdI GACNNNNNGTC 1 cut(s) 133
Alw26I GTCTC 2 cut(s) 141, 221
AlwI GGATC 1 cut(s) 40
AoxI GGCC 2 cut(s) 181, 189
ApoI RAATTY 1 cut(s) 8
AspS9I GGNCC 1 cut(s) 44
AvaII GGWCC 1 cut(s) 44
BaeGI GKGCMC 1 cut(s) 119
BalI TGGCCA 1 cut(s) 183
BanI GGYRCC 1 cut(s) 116
BanII GRGCYC 1 cut(s) 78
BccI CCATC 2 cut(s) 125, 173
BcoDI GTCTC 2 cut(s) 141, 221
BglII AGATCT 1 cut(s) 52
BisI GCNGC 2 cut(s) 192, 195
BlsI GCNGC 2 cut(s) 193, 196
BmcAI AGTACT 1 cut(s) 262
Bme18I GGWCC 1 cut(s) 44
BmeRI GACNNNNNGTC 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 44
BmiI GGNNCC 2 cut(s) 46, 118
Bpu10I CCTNAGC 1 cut(s) 174
BsaHI GRCGYC 1 cut(s) 207
BsaI GGTCTC 1 cut(s) 141
BsaJI CCNNGG 1 cut(s) 123
BsaWI WCCGGW 1 cut(s) 139
Bsc4I CCNNNNNNNGG 1 cut(s) 90
Bse3DI GCAATG 1 cut(s) 208
BseDI CCNNGG 1 cut(s) 123
BseGI GGATG 2 cut(s) 184, 232
BseLI CCNNNNNNNGG 1 cut(s) 90
BseMI GCAATG 1 cut(s) 208
BseMII CTCAG 1 cut(s) 188
BseSI GKGCMC 1 cut(s) 119
BshFI GGCC 2 cut(s) 183, 191
BshNI GGYRCC 1 cut(s) 116
BsiSI CCGG 1 cut(s) 140
BslI CCNNNNNNNGG 1 cut(s) 90
BsmAI GTCTC 2 cut(s) 141, 221
BsmBI CGTCTC 1 cut(s) 221
BsnI GGCC 2 cut(s) 183, 191
Bso31I GGTCTC 1 cut(s) 141
Bsp1286I GDGCHC 2 cut(s) 78, 119
Bsp143I GATC 2 cut(s) 32, 52
BspACI CCGC 4 cut(s) 42, 87, 192, 195
BspANI GGCC 2 cut(s) 183, 191
BspCNI CTCAG 1 cut(s) 187
BspLI GGNNCC 2 cut(s) 46, 118
BspPI GGATC 1 cut(s) 40
BspT107I GGYRCC 1 cut(s) 116
BspTNI GGTCTC 1 cut(s) 141
BsrBI CCGCTC 2 cut(s) 42, 197
BsrDI GCAATG 1 cut(s) 208
BssECI CCNNGG 1 cut(s) 123
BssMI GATC 2 cut(s) 32, 52
BssNI GRCGYC 1 cut(s) 207
BssT1I CCWWGG 1 cut(s) 123
Bst4CI ACNGT 2 cut(s) 226, 260
BstACI GRCGYC 1 cut(s) 207
BstC8I GCNNGC 2 cut(s) 74, 199
BstDEI CTNAG 1 cut(s) 174
BstF5I GGATG 2 cut(s) 184, 232
BstKTI GATC 2 cut(s) 35, 55
BstMAI GTCTC 2 cut(s) 141, 221
BstMBI GATC 2 cut(s) 32, 52
BstSLI GKGCMC 1 cut(s) 119
BstX2I RGATCY 2 cut(s) 32, 52
BstYI RGATCY 2 cut(s) 32, 52
BsuRI GGCC 2 cut(s) 183, 191
BtsCI GGATG 2 cut(s) 184, 232
Cac8I GCNNGC 2 cut(s) 74, 199
Cfr13I GGNCC 1 cut(s) 44
CseI GACGC 2 cut(s) 196, 203
Csp6I GTAC 2 cut(s) 222, 261
CviJI RGCY 3 cut(s) 76, 183, 191
CviKI_1 RGCY 3 cut(s) 76, 183, 191
CviQI GTAC 2 cut(s) 222, 261
DdeI CTNAG 1 cut(s) 174
DpnI GATC 2 cut(s) 34, 54
DpnII GATC 2 cut(s) 32, 52
DriI GACNNNNNGTC 1 cut(s) 133
EaeI YGGCCR 2 cut(s) 181, 189
Eam1105I GACNNNNNGTC 1 cut(s) 133
Eco130I CCWWGG 1 cut(s) 123
Eco24I GRGCYC 1 cut(s) 78
Eco31I GGTCTC 1 cut(s) 141
Eco47I GGWCC 1 cut(s) 44
Eco57I CTGAAG 1 cut(s) 94
EcoT14I CCWWGG 1 cut(s) 123
EcoT38I GRGCYC 1 cut(s) 78
ErhI CCWWGG 1 cut(s) 123
Esp3I CGTCTC 1 cut(s) 221
FaiI YATR 1 cut(s) 149
Fnu4HI GCNGC 2 cut(s) 192, 195
FokI GGATG 2 cut(s) 191, 219
FriOI GRGCYC 1 cut(s) 78
Fsp4HI GCNGC 2 cut(s) 192, 195
GluI GCNGC 2 cut(s) 192, 195
HaeIII GGCC 2 cut(s) 183, 191
HapII CCGG 1 cut(s) 140
HgaI GACGC 2 cut(s) 196, 203
Hin1I GRCGYC 1 cut(s) 207
HinfI GANTC 2 cut(s) 16, 103
HpaII CCGG 1 cut(s) 140
Hpy188I TCNGA 1 cut(s) 230
Hpy188III TCNNGA 2 cut(s) 13, 176
HpyCH4III ACNGT 2 cut(s) 226, 260
HpyF3I CTNAG 1 cut(s) 174
Hsp92I GRCGYC 1 cut(s) 207
Kzo9I GATC 2 cut(s) 32, 52
LmnI GCTCC 1 cut(s) 39
LpnPI CCDG 4 cut(s) 21, 97, 153, 161
MalI GATC 2 cut(s) 34, 54
MbiI CCGCTC 2 cut(s) 42, 197
MboI GATC 2 cut(s) 32, 52
MflI RGATCY 2 cut(s) 32, 52
MhlI GDGCHC 2 cut(s) 78, 119
MlsI TGGCCA 1 cut(s) 183
MluCI AATT 1 cut(s) 8
MluNI TGGCCA 1 cut(s) 183
MlyI GAGTC 1 cut(s) 97
MnlI CCTC 2 cut(s) 94, 130
Mox20I TGGCCA 1 cut(s) 183
MscI TGGCCA 1 cut(s) 183
Msp20I TGGCCA 1 cut(s) 183
MspI CCGG 1 cut(s) 140
NdeII GATC 2 cut(s) 32, 52
NlaIV GGNNCC 2 cut(s) 46, 118
PfeI GAWTC 1 cut(s) 16
PkrI GCNGC 2 cut(s) 193, 196
PleI GAGTC 1 cut(s) 97
PpsI GAGTC 1 cut(s) 97
PspN4I GGNNCC 2 cut(s) 46, 118
PspPI GGNCC 1 cut(s) 44
PsuI RGATCY 2 cut(s) 32, 52
RsaI GTAC 2 cut(s) 223, 262
RsaNI GTAC 2 cut(s) 222, 261
SatI GCNGC 2 cut(s) 192, 195
Sau3AI GATC 2 cut(s) 32, 52
Sau96I GGNCC 1 cut(s) 44
ScaI AGTACT 1 cut(s) 262
SchI GAGTC 1 cut(s) 97
SduI GDGCHC 2 cut(s) 78, 119
SetI ASST 1 cut(s) 122
SinI GGWCC 1 cut(s) 44
Sse9I AATT 1 cut(s) 8
SsiI CCGC 4 cut(s) 42, 87, 192, 195
StyI CCWWGG 1 cut(s) 123
TaaI ACNGT 2 cut(s) 226, 260
TaqI TCGA 1 cut(s) 19
TasI AATT 1 cut(s) 8
TatI WGTACW 1 cut(s) 260
TauI GCSGC 2 cut(s) 194, 197
TfiI GAWTC 1 cut(s) 16
TspGWI ACGGA 1 cut(s) 209
VpaK11BI GGWCC 1 cut(s) 44
XapI RAATTY 1 cut(s) 8
ZrmI AGTACT 1 cut(s) 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.