Rmu_sc0024194.1_g000001

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0024194.1
Physical Location & Seq
Forward (+)
981 .. 1280
300 bp
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UTR
Exon/CDS
Intron
Rmu_sc0024194.1_g000001.1.cds

Sequence Viewer

Length: 300 bp
atgactcgtcatatggatgattcgctccagtacgagtatatgaatgaagaaaacccccgaaggttgtgggtctcacttgaagaaagatttcgcaatgtccgtgactccctgcttcctacactagaagtgagatggcatagcctccgcttctatgatttcaagtcagttattgactacaacttggaagcacttcgcattaaatcattaatggaattctgtggaacagatatcacagatgcgatgttgattgagaggactctctctaccttccccttctctgctttgatggttgcaaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

99

Amino Acids

11.94

Weight (kDa)

5.34

Isoelectric Point (pI)

61.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031292)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0004058.1_g000025 Rmu_sc0024194.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 145
AcsI RAATTY 1 cut(s) 212
AfaI GTAC 1 cut(s) 32
AgsI TTSAA 2 cut(s) 80, 160
Alw26I GTCTC 1 cut(s) 76
ApoI RAATTY 1 cut(s) 212
AseI ATTAAT 1 cut(s) 206
Asp700I GAANNNNTTC 2 cut(s) 87, 189
BccI CCATC 2 cut(s) 126, 280
BcoDI GTCTC 1 cut(s) 76
BfaI CTAG 1 cut(s) 122
BmsI GCATC 1 cut(s) 226
BpmI CTGGAG 1 cut(s) 11
BsaI GGTCTC 1 cut(s) 76
Bse1I ACTGG 1 cut(s) 28
Bse3DI GCAATG 1 cut(s) 100
BseGI GGATG 1 cut(s) 22
BseMI GCAATG 1 cut(s) 100
BseNI ACTGG 1 cut(s) 28
BsmAI GTCTC 1 cut(s) 76
Bso31I GGTCTC 1 cut(s) 76
BspACI CCGC 1 cut(s) 145
BspTNI GGTCTC 1 cut(s) 76
BsrDI GCAATG 1 cut(s) 100
BsrI ACTGG 1 cut(s) 28
BstF5I GGATG 1 cut(s) 22
BstMAI GTCTC 1 cut(s) 76
BtgZI GCGATG 1 cut(s) 254
BtsCI GGATG 1 cut(s) 22
Csp6I GTAC 1 cut(s) 31
CviJI RGCY 1 cut(s) 141
CviKI_1 RGCY 1 cut(s) 141
CviQI GTAC 1 cut(s) 31
Eco31I GGTCTC 1 cut(s) 76
Eco32I GATATC 1 cut(s) 229
EcoRI GAATTC 1 cut(s) 212
EcoRV GATATC 1 cut(s) 229
FaiI YATR 6 cut(s) 12, 14, 39, 41, 138, 153
FauNDI CATATG 1 cut(s) 12
FokI GGATG 1 cut(s) 29
FspBI CTAG 1 cut(s) 122
GsuI CTGGAG 1 cut(s) 11
HinfI GANTC 4 cut(s) 4, 20, 104, 256
HpyAV CCTTC 3 cut(s) 54, 277, 283
HpyCH4V TGCA 1 cut(s) 293
LmnI GCTCC 1 cut(s) 30
LpnPI CCDG 2 cut(s) 41, 122
LweI GCATC 1 cut(s) 226
MaeI CTAG 1 cut(s) 122
MaeIII GTNAC 1 cut(s) 101
MboII GAAGA 2 cut(s) 59, 92
MluCI AATT 1 cut(s) 212
MlyI GAGTC 2 cut(s) 98, 250
MnlI CCTC 2 cut(s) 152, 246
MroXI GAANNNNTTC 2 cut(s) 87, 189
MseI TTAA 2 cut(s) 198, 206
MslI CAYNNNNRTG 1 cut(s) 15
NdeI CATATG 1 cut(s) 12
NmuCI GTSAC 1 cut(s) 101
PcsI WCGNNNNNNNCGW 1 cut(s) 97
PdmI GAANNNNTTC 2 cut(s) 87, 189
PfeI GAWTC 1 cut(s) 20
PleI GAGTC 2 cut(s) 98, 250
PpsI GAGTC 2 cut(s) 98, 250
PshBI ATTAAT 1 cut(s) 206
RsaI GTAC 1 cut(s) 32
RsaNI GTAC 1 cut(s) 31
RseI CAYNNNNRTG 1 cut(s) 15
SaqAI TTAA 2 cut(s) 198, 206
SchI GAGTC 2 cut(s) 98, 250
SetI ASST 2 cut(s) 65, 269
SfaNI GCATC 1 cut(s) 226
SmiMI CAYNNNNRTG 1 cut(s) 15
Sse9I AATT 1 cut(s) 212
SsiI CCGC 1 cut(s) 145
SspMI CTAG 1 cut(s) 122
TasI AATT 1 cut(s) 212
TfiI GAWTC 1 cut(s) 20
Tru1I TTAA 2 cut(s) 198, 206
Tru9I TTAA 2 cut(s) 198, 206
TseFI GTSAC 1 cut(s) 101
Tsp45I GTSAC 1 cut(s) 101
TspDTI ATGAA 2 cut(s) 56, 60
TspGWI ACGGA 1 cut(s) 89
VspI ATTAAT 1 cut(s) 206
XapI RAATTY 1 cut(s) 212
XmnI GAANNNNTTC 2 cut(s) 87, 189
XspI CTAG 1 cut(s) 122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.