Rmu_sc0025716.1_g000001

Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0025716.1
OG0031120
Physical Location & Seq
Forward (+)
56 .. 506
451 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0025716.1_g000001.1.cds

Sequence Viewer

Length: 330 bp
atggattctgcaactgcagccatgaagcgatctgacaccatagccgaaagcttgcccgacgctctgaggcagagccggtaccatatgaagaggtgttttgctaagttcattgaaaagggaaaaaggataatgaaacttcagcatttgatgaatgaagtggagttagtcatagatgacaaggttgaaatgaaccaagtcttggcaggagtacttggctatatattgtgttcaactcaggaagctgttgttagtcctccacatgttctcttttcaataagaccaaaccctggatattgggaatttgttaaagtcagctctgaggatctctca

Protein Analysis

110

Amino Acids

12.49

Weight (kDa)

6.82

Isoelectric Point (pI)

49.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0031120)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0001208.1_g000095 Rmu_sc0025716.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 78
AccB1I GGYRCC 1 cut(s) 78
AccB7I CCANNNNNTGG 2 cut(s) 199, 287
AcsI RAATTY 1 cut(s) 299
AcuI CTGAAG 1 cut(s) 122
AfaI GTAC 2 cut(s) 80, 210
AfiI CCNNNNNNNGG 2 cut(s) 199, 287
AflIII ACRYGT 1 cut(s) 259
AgsI TTSAA 4 cut(s) 113, 185, 231, 273
AjnI CCWGG 1 cut(s) 286
AjuI GAANNNNNNNTTGG 2 cut(s) 182, 214
AluBI AGCT 3 cut(s) 51, 242, 315
AluI AGCT 3 cut(s) 51, 242, 315
ApeKI GCWGC 1 cut(s) 17
ApoI RAATTY 1 cut(s) 299
Asp718I GGTACC 1 cut(s) 78
BanI GGYRCC 1 cut(s) 78
BbvI GCAGC 1 cut(s) 29
BciT130I CCWGG 1 cut(s) 288
BfmI CTRYAG 1 cut(s) 15
BisI GCNGC 1 cut(s) 18
BlsI GCNGC 1 cut(s) 19
BmcAI AGTACT 1 cut(s) 210
Bme1390I CCNGG 1 cut(s) 288
BmiI GGNNCC 1 cut(s) 80
BmrFI CCNGG 1 cut(s) 288
BplI GAGNNNNNCTC 1 cut(s) 311
BsaJI CCNNGG 1 cut(s) 286
Bsc4I CCNNNNNNNGG 2 cut(s) 199, 287
Bse118I RCCGGY 1 cut(s) 75
BseBI CCWGG 1 cut(s) 288
BseDI CCNNGG 1 cut(s) 286
BseLI CCNNNNNNNGG 2 cut(s) 199, 287
BseMII CTCAG 3 cut(s) 56, 248, 309
BseXI GCAGC 1 cut(s) 29
BshNI GGYRCC 1 cut(s) 78
BsiSI CCGG 1 cut(s) 76
BslI CCNNNNNNNGG 2 cut(s) 199, 287
Bsp143I GATC 2 cut(s) 29, 322
BspCNI CTCAG 3 cut(s) 57, 247, 310
BspLI GGNNCC 1 cut(s) 80
BspMAI CTGCAG 1 cut(s) 19
BspT107I GGYRCC 1 cut(s) 78
BsrFI RCCGGY 1 cut(s) 75
BssAI RCCGGY 1 cut(s) 75
BssECI CCNNGG 1 cut(s) 286
BssMI GATC 2 cut(s) 29, 322
Bst2UI CCWGG 1 cut(s) 288
Bst6I CTCTTC 1 cut(s) 83
BstC8I GCNNGC 1 cut(s) 53
BstDEI CTNAG 4 cut(s) 65, 102, 234, 318
BstKTI GATC 2 cut(s) 32, 325
BstMBI GATC 2 cut(s) 29, 322
BstMWI GCNNNNNNNGC 1 cut(s) 17
BstNI CCWGG 1 cut(s) 288
BstNSI RCATGY 1 cut(s) 263
BstSCI CCNGG 1 cut(s) 286
BstSFI CTRYAG 1 cut(s) 15
BstV1I GCAGC 1 cut(s) 29
BstX2I RGATCY 1 cut(s) 322
BstYI RGATCY 1 cut(s) 322
Cac8I GCNNGC 1 cut(s) 53
Cfr10I RCCGGY 1 cut(s) 75
CseI GACGC 1 cut(s) 68
Csp6I GTAC 2 cut(s) 79, 209
CviAII CATG 2 cut(s) 22, 260
CviJI RGCY 7 cut(s) 20, 44, 51, 75, 216, 242, 315
CviKI_1 RGCY 7 cut(s) 20, 44, 51, 75, 216, 242, 315
CviQI GTAC 2 cut(s) 79, 209
DdeI CTNAG 4 cut(s) 65, 102, 234, 318
DpnI GATC 2 cut(s) 31, 324
DpnII GATC 2 cut(s) 29, 322
Eam1104I CTCTTC 1 cut(s) 83
EarI CTCTTC 1 cut(s) 83
Eco57I CTGAAG 1 cut(s) 122
EcoRII CCWGG 1 cut(s) 286
FaeI CATG 2 cut(s) 25, 263
FaiI YATR 8 cut(s) 23, 41, 84, 86, 170, 219, 221, 261
FatI CATG 2 cut(s) 21, 259
FauNDI CATATG 1 cut(s) 84
Fnu4HI GCNGC 1 cut(s) 18
Fsp4HI GCNGC 1 cut(s) 18
GluI GCNGC 1 cut(s) 18
HapII CCGG 1 cut(s) 76
HgaI GACGC 1 cut(s) 68
Hin1II CATG 2 cut(s) 25, 263
HindIII AAGCTT 1 cut(s) 49
HinfI GANTC 1 cut(s) 5
HpaII CCGG 1 cut(s) 76
Hpy188I TCNGA 3 cut(s) 34, 66, 319
Hpy188III TCNNGA 1 cut(s) 236
Hpy99I CGWCG 1 cut(s) 62
HpyCH4V TGCA 2 cut(s) 11, 17
HpyF10VI GCNNNNNNNGC 1 cut(s) 17
HpyF3I CTNAG 4 cut(s) 65, 102, 234, 318
Hsp92II CATG 2 cut(s) 25, 263
KpnI GGTACC 1 cut(s) 82
Kzo9I GATC 2 cut(s) 29, 322
LpnPI CCDG 5 cut(s) 89, 189, 221, 273, 300
Lsp1109I GCAGC 1 cut(s) 29
MalI GATC 2 cut(s) 31, 324
MboI GATC 2 cut(s) 29, 322
MboII GAAGA 1 cut(s) 100
MflI RGATCY 1 cut(s) 322
MluCI AATT 1 cut(s) 299
MnlI CCTC 4 cut(s) 60, 84, 264, 313
MseI TTAA 1 cut(s) 306
MspI CCGG 1 cut(s) 76
MspR9I CCNGG 1 cut(s) 288
MvaI CCWGG 1 cut(s) 288
MwoI GCNNNNNNNGC 1 cut(s) 17
NdeI CATATG 1 cut(s) 84
NdeII GATC 2 cut(s) 29, 322
NlaIII CATG 2 cut(s) 25, 263
NlaIV GGNNCC 1 cut(s) 80
NspI RCATGY 1 cut(s) 263
PciI ACATGT 1 cut(s) 259
PfeI GAWTC 1 cut(s) 5
PflMI CCANNNNNTGG 2 cut(s) 199, 287
PkrI GCNGC 1 cut(s) 19
PscI ACATGT 1 cut(s) 259
Psp6I CCWGG 1 cut(s) 286
PspGI CCWGG 1 cut(s) 286
PspN4I GGNNCC 1 cut(s) 80
PstI CTGCAG 1 cut(s) 19
PsuI RGATCY 1 cut(s) 322
RsaI GTAC 2 cut(s) 80, 210
RsaNI GTAC 2 cut(s) 79, 209
SaqAI TTAA 1 cut(s) 306
SatI GCNGC 1 cut(s) 18
Sau3AI GATC 2 cut(s) 29, 322
ScaI AGTACT 1 cut(s) 210
ScrFI CCNGG 1 cut(s) 288
SetI ASST 5 cut(s) 53, 95, 183, 244, 317
SfcI CTRYAG 1 cut(s) 15
Sse9I AATT 1 cut(s) 299
StyD4I CCNGG 1 cut(s) 286
TasI AATT 1 cut(s) 299
TatI WGTACW 1 cut(s) 208
TfiI GAWTC 1 cut(s) 5
Tru1I TTAA 1 cut(s) 306
Tru9I TTAA 1 cut(s) 306
TseI GCWGC 1 cut(s) 17
TspDTI ATGAA 7 cut(s) 38, 97, 101, 146, 164, 168, 203
Van91I CCANNNNNTGG 2 cut(s) 199, 287
XapI RAATTY 1 cut(s) 299
XceI RCATGY 1 cut(s) 263
ZrmI AGTACT 1 cut(s) 210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.