Rmu_sc0026749.1_g000001

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0026749.1
Physical Location & Seq
Forward (+)
102 .. 464
363 bp
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UTR
Exon/CDS
Intron
Rmu_sc0026749.1_g000001.1.cds

Sequence Viewer

Length: 363 bp
atgaatgaagaagaccccagaacgctgtgggtctcactcgaagatagatttggcaacgtccgtgactccctgcttcctgacctagaagtgagatggcatagcctccacttctgtgatttcaagtcagttcttgactacaactcggaagcacttcgcattaaatccctaatggaattttgtggtaaagagatcataaatgcgatgttgattgagaagactctctctactttccctgtctctgcattgatggttgctaagaactatcgaatagatgtcactacaagacgaattacaaggtttcatgagctcattagagctatgaatgtcactaaaaagcatgaaaacatccttgtgaataactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

120

Amino Acids

14.14

Weight (kDa)

6.91

Isoelectric Point (pI)

41.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031100)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0000824.1_g000005 Rmu_sc0026749.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 173
AgsI TTSAA 1 cut(s) 121
AjuI GAANNNNNNNTTGG 2 cut(s) 33, 65
AleI CACNNNNGTG 1 cut(s) 111
AluBI AGCT 2 cut(s) 307, 317
AluI AGCT 2 cut(s) 307, 317
Alw21I GWGCWC 1 cut(s) 309
Alw26I GTCTC 2 cut(s) 37, 241
ApoI RAATTY 1 cut(s) 173
Asp700I GAANNNNTTC 1 cut(s) 150
BanII GRGCYC 1 cut(s) 309
BbsI GAAGAC 2 cut(s) 18, 221
Bbv12I GWGCWC 1 cut(s) 309
BccI CCATC 2 cut(s) 87, 241
BcoDI GTCTC 2 cut(s) 37, 241
BfaI CTAG 1 cut(s) 83
BpiI GAAGAC 2 cut(s) 18, 221
BsaI GGTCTC 1 cut(s) 37
BseGI GGATG 1 cut(s) 345
BsiHKAI GWGCWC 1 cut(s) 309
BsmAI GTCTC 2 cut(s) 37, 241
Bso31I GGTCTC 1 cut(s) 37
Bsp1286I GDGCHC 1 cut(s) 309
Bsp143I GATC 1 cut(s) 189
BspHI TCATGA 1 cut(s) 301
BspTNI GGTCTC 1 cut(s) 37
BssMI GATC 1 cut(s) 189
BstDEI CTNAG 1 cut(s) 255
BstF5I GGATG 1 cut(s) 345
BstKTI GATC 1 cut(s) 192
BstMAI GTCTC 2 cut(s) 37, 241
BstMBI GATC 1 cut(s) 189
BstV2I GAAGAC 2 cut(s) 18, 221
BtgZI GCGATG 1 cut(s) 215
BtsCI GGATG 1 cut(s) 345
CciI TCATGA 1 cut(s) 301
CviAII CATG 2 cut(s) 302, 338
CviJI RGCY 3 cut(s) 102, 307, 317
CviKI_1 RGCY 3 cut(s) 102, 307, 317
DdeI CTNAG 1 cut(s) 255
DpnI GATC 1 cut(s) 191
DpnII GATC 1 cut(s) 189
Ecl136II GAGCTC 1 cut(s) 307
Eco24I GRGCYC 1 cut(s) 309
Eco31I GGTCTC 1 cut(s) 37
Eco53kI GAGCTC 1 cut(s) 307
EcoICRI GAGCTC 1 cut(s) 307
EcoT38I GRGCYC 1 cut(s) 309
FaeI CATG 2 cut(s) 305, 341
FaiI YATR 5 cut(s) 99, 194, 303, 320, 339
FatI CATG 2 cut(s) 301, 337
FokI GGATG 1 cut(s) 332
FriOI GRGCYC 1 cut(s) 309
FspBI CTAG 1 cut(s) 83
Hin1II CATG 2 cut(s) 305, 341
HinfI GANTC 2 cut(s) 65, 217
Hpy188I TCNGA 1 cut(s) 145
Hpy188III TCNNGA 3 cut(s) 77, 131, 302
HpyCH4IV ACGT 1 cut(s) 57
HpyCH4V TGCA 1 cut(s) 242
HpyF3I CTNAG 1 cut(s) 255
HpySE526I ACGT 1 cut(s) 57
Hsp92II CATG 2 cut(s) 305, 341
Kzo9I GATC 1 cut(s) 189
LpnPI CCDG 4 cut(s) 31, 83, 90, 246
MaeI CTAG 1 cut(s) 83
MaeII ACGT 1 cut(s) 57
MaeIII GTNAC 3 cut(s) 62, 274, 325
MalI GATC 1 cut(s) 191
MboI GATC 1 cut(s) 189
MboII GAAGA 4 cut(s) 20, 23, 53, 226
MhlI GDGCHC 1 cut(s) 309
MluCI AATT 2 cut(s) 173, 288
MlyI GAGTC 2 cut(s) 59, 211
MnlI CCTC 1 cut(s) 113
MroXI GAANNNNTTC 1 cut(s) 150
MseI TTAA 1 cut(s) 159
MslI CAYNNNNRTG 2 cut(s) 111, 350
NdeII GATC 1 cut(s) 189
NlaIII CATG 2 cut(s) 305, 341
NmuCI GTSAC 3 cut(s) 62, 274, 325
OliI CACNNNNGTG 1 cut(s) 111
PagI TCATGA 1 cut(s) 301
PdmI GAANNNNTTC 1 cut(s) 150
PleI GAGTC 2 cut(s) 59, 211
PpsI GAGTC 2 cut(s) 59, 211
Psp124BI GAGCTC 1 cut(s) 309
RseI CAYNNNNRTG 2 cut(s) 111, 350
SacI GAGCTC 1 cut(s) 309
SaqAI TTAA 1 cut(s) 159
Sau3AI GATC 1 cut(s) 189
SchI GAGTC 2 cut(s) 59, 211
SduI GDGCHC 1 cut(s) 309
SetI ASST 5 cut(s) 60, 84, 299, 309, 319
SmiMI CAYNNNNRTG 2 cut(s) 111, 350
Sse9I AATT 2 cut(s) 173, 288
SspMI CTAG 1 cut(s) 83
SstI GAGCTC 1 cut(s) 309
TaiI ACGT 1 cut(s) 60
TaqI TCGA 2 cut(s) 39, 265
TasI AATT 2 cut(s) 173, 288
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TseFI GTSAC 3 cut(s) 62, 274, 325
Tsp45I GTSAC 3 cut(s) 62, 274, 325
TspDTI ATGAA 5 cut(s) 17, 21, 290, 335, 354
TspGWI ACGGA 1 cut(s) 50
XapI RAATTY 1 cut(s) 173
XmnI GAANNNNTTC 1 cut(s) 150
XspI CTAG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.