Rmu_sc0034781.1_g000002
NAC Family

NAC domain protein, IPR003441 source

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0034781.1
Physical Location & Seq
Reverse (-)
1462 .. 1800
339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0034781.1_g000002.1.cds

Sequence Viewer

Length: 339 bp
atgcaggcctgcgaagccatagagaaaactcctaatctgaacaagcaggaggtggagtgtcatcctctggagatggatgcgagcaggaaaattgcggaagaaccctcaacaacactgattgatgagaagaagaaaaccactgaagaagtcgcaacaaagatcaggtcaaggacgggagggaatgataattcattacatagcagccatattgggacgtcagtgcgttccaaggcagcagcatctaaatatcatggcctgattatcttcattatttcagttgggattcccttggttctaaccatgttcatagcctttagtgggatctggatatcccattag

Protein Analysis

112

Amino Acids

12.31

Weight (kDa)

6.96

Isoelectric Point (pI)

52.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031307)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0004483.1_g000047 Rmu_sc0034781.1_g000002

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 218
AciI CCGC 1 cut(s) 95
AclWI GGATC 1 cut(s) 329
AcuI CTGAAG 1 cut(s) 162
AcyI GRCGYC 1 cut(s) 215
AfiI CCNNNNNNNGG 1 cut(s) 318
AlwI GGATC 1 cut(s) 329
AoxI GGCC 2 cut(s) 6, 253
ApeKI GCWGC 3 cut(s) 201, 233, 236
ArsI GACNNNNNNTTYG 2 cut(s) 149, 181
BbvI GCAGC 3 cut(s) 213, 245, 248
BccI CCATC 1 cut(s) 67
BisI GCNGC 3 cut(s) 202, 234, 237
BlsI GCNGC 3 cut(s) 203, 235, 238
BmsI GCATC 2 cut(s) 67, 248
BpmI CTGGAG 1 cut(s) 89
BsaHI GRCGYC 1 cut(s) 215
BsaJI CCNNGG 2 cut(s) 228, 288
BsaXI ACNNNNNCTCC 2 cut(s) 41, 71
Bsc4I CCNNNNNNNGG 1 cut(s) 318
BseDI CCNNGG 2 cut(s) 228, 288
BseGI GGATG 2 cut(s) 61, 82
BseLI CCNNNNNNNGG 1 cut(s) 318
BseXI GCAGC 3 cut(s) 213, 245, 248
BshFI GGCC 2 cut(s) 8, 255
BslFI GGGAC 1 cut(s) 226
BslI CCNNNNNNNGG 1 cut(s) 318
BsmFI GGGAC 1 cut(s) 226
BsnI GGCC 2 cut(s) 8, 255
Bsp143I GATC 2 cut(s) 159, 321
BspACI CCGC 1 cut(s) 95
BspANI GGCC 2 cut(s) 8, 255
BspPI GGATC 1 cut(s) 329
BssECI CCNNGG 2 cut(s) 228, 288
BssMI GATC 2 cut(s) 159, 321
BssNI GRCGYC 1 cut(s) 215
BssT1I CCWWGG 2 cut(s) 228, 288
BstACI GRCGYC 1 cut(s) 215
BstC8I GCNNGC 3 cut(s) 6, 10, 82
BstF5I GGATG 2 cut(s) 61, 82
BstKTI GATC 2 cut(s) 162, 324
BstMBI GATC 2 cut(s) 159, 321
BstMWI GCNNNNNNNGC 1 cut(s) 14
BstV1I GCAGC 3 cut(s) 213, 245, 248
BstX2I RGATCY 1 cut(s) 321
BstYI RGATCY 1 cut(s) 321
BsuRI GGCC 2 cut(s) 8, 255
BtsCI GGATG 2 cut(s) 61, 82
BtsIMutI CAGTG 3 cut(s) 113, 138, 225
Cac8I GCNNGC 3 cut(s) 6, 10, 82
CviAII CATG 2 cut(s) 251, 301
CviJI RGCY 5 cut(s) 8, 17, 204, 255, 311
CviKI_1 RGCY 5 cut(s) 8, 17, 204, 255, 311
DpnI GATC 2 cut(s) 161, 323
DpnII GATC 2 cut(s) 159, 321
Eco130I CCWWGG 2 cut(s) 228, 288
Eco147I AGGCCT 1 cut(s) 8
Eco32I GATATC 1 cut(s) 330
Eco57I CTGAAG 1 cut(s) 162
EcoRV GATATC 1 cut(s) 330
EcoT14I CCWWGG 2 cut(s) 228, 288
ErhI CCWWGG 2 cut(s) 228, 288
FaeI CATG 2 cut(s) 254, 304
FaiI YATR 6 cut(s) 20, 198, 207, 252, 302, 308
FaqI GGGAC 1 cut(s) 226
FatI CATG 2 cut(s) 250, 300
Fnu4HI GCNGC 3 cut(s) 202, 234, 237
FokI GGATG 2 cut(s) 48, 89
Fsp4HI GCNGC 3 cut(s) 202, 234, 237
GluI GCNGC 3 cut(s) 202, 234, 237
GsuI CTGGAG 1 cut(s) 89
HaeIII GGCC 2 cut(s) 8, 255
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 2 cut(s) 254, 304
HinfI GANTC 1 cut(s) 283
Hpy188I TCNGA 1 cut(s) 39
Hpy188III TCNNGA 2 cut(s) 68, 325
HpyCH4IV ACGT 1 cut(s) 215
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 1 cut(s) 14
HpySE526I ACGT 1 cut(s) 215
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 2 cut(s) 254, 304
Kzo9I GATC 2 cut(s) 159, 321
LpnPI CCDG 7 cut(s) 22, 32, 53, 70, 148, 269, 310
Lsp1109I GCAGC 3 cut(s) 213, 245, 248
LweI GCATC 2 cut(s) 67, 248
MaeII ACGT 1 cut(s) 215
MalI GATC 2 cut(s) 161, 323
MboI GATC 2 cut(s) 159, 321
MboII GAAGA 5 cut(s) 110, 139, 142, 155, 256
MflI RGATCY 1 cut(s) 321
MluCI AATT 2 cut(s) 90, 187
MnlI CCTC 4 cut(s) 43, 75, 115, 170
MwoI GCNNNNNNNGC 1 cut(s) 14
NdeII GATC 2 cut(s) 159, 321
NlaIII CATG 2 cut(s) 254, 304
PceI AGGCCT 1 cut(s) 8
PfeI GAWTC 1 cut(s) 283
PkrI GCNGC 3 cut(s) 203, 235, 238
PsuI RGATCY 1 cut(s) 321
SatI GCNGC 3 cut(s) 202, 234, 237
Sau3AI GATC 2 cut(s) 159, 321
SetI ASST 3 cut(s) 54, 167, 218
SfaNI GCATC 2 cut(s) 67, 248
Sse9I AATT 2 cut(s) 90, 187
SseBI AGGCCT 1 cut(s) 8
SsiI CCGC 1 cut(s) 95
StuI AGGCCT 1 cut(s) 8
StyI CCWWGG 2 cut(s) 228, 288
TaiI ACGT 1 cut(s) 218
TasI AATT 2 cut(s) 90, 187
TfiI GAWTC 1 cut(s) 283
TscAI CASTG 3 cut(s) 120, 145, 225
TseI GCWGC 3 cut(s) 201, 233, 236
TspDTI ATGAA 3 cut(s) 180, 256, 295
TspRI CASTG 3 cut(s) 120, 145, 225
ZraI GACGTC 1 cut(s) 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.