Polygalacturonase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002510.1_g000010 Rmu_ssc0000125.1_g000024 |
| rosa_rugosa | Rorug05G0595200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 257 |
| AccI | GTMKAC | 2 cut(s) | 8, 41 |
| AciI | CCGC | 2 cut(s) | 124, 147 |
| AclWI | GGATC | 1 cut(s) | 270 |
| AcuI | CTGAAG | 2 cut(s) | 45, 183 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 304 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 37 |
| AjnI | CCWGG | 1 cut(s) | 289 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 40, 72 |
| AluBI | AGCT | 3 cut(s) | 15, 121, 284 |
| AluI | AGCT | 3 cut(s) | 15, 121, 284 |
| AlwI | GGATC | 1 cut(s) | 270 |
| ApeKI | GCWGC | 1 cut(s) | 99 |
| BbvCI | CCTCAGC | 1 cut(s) | 280 |
| BbvI | GCAGC | 1 cut(s) | 111 |
| BceAI | ACGGC | 1 cut(s) | 112 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 31, 65, 293, 327 |
| BciT130I | CCWGG | 1 cut(s) | 291 |
| BfaI | CTAG | 1 cut(s) | 364 |
| BisI | GCNGC | 2 cut(s) | 100, 147 |
| BlsI | GCNGC | 2 cut(s) | 101, 148 |
| Bme1390I | CCNGG | 1 cut(s) | 291 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 37 |
| BmrFI | CCNGG | 1 cut(s) | 291 |
| BmsI | GCATC | 2 cut(s) | 39, 135 |
| Bpu10I | CCTNAGC | 1 cut(s) | 280 |
| BsaJI | CCNNGG | 2 cut(s) | 190, 303 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 304 |
| Bse1I | ACTGG | 1 cut(s) | 187 |
| BseBI | CCWGG | 1 cut(s) | 291 |
| BseDI | CCNNGG | 2 cut(s) | 190, 303 |
| BseGI | GGATG | 1 cut(s) | 54 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 304 |
| BseMII | CTCAG | 1 cut(s) | 294 |
| BseNI | ACTGG | 1 cut(s) | 187 |
| BseXI | GCAGC | 1 cut(s) | 111 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 304 |
| Bsp143I | GATC | 1 cut(s) | 262 |
| Bsp19I | CCATGG | 1 cut(s) | 190 |
| BspACI | CCGC | 2 cut(s) | 124, 147 |
| BspCNI | CTCAG | 1 cut(s) | 293 |
| BspPI | GGATC | 1 cut(s) | 270 |
| BsrI | ACTGG | 1 cut(s) | 187 |
| BssECI | CCNNGG | 2 cut(s) | 190, 303 |
| BssMI | GATC | 1 cut(s) | 262 |
| BssT1I | CCWWGG | 1 cut(s) | 190 |
| Bst2UI | CCWGG | 1 cut(s) | 291 |
| Bst4CI | ACNGT | 3 cut(s) | 71, 116, 138 |
| BstC8I | GCNNGC | 1 cut(s) | 213 |
| BstDEI | CTNAG | 1 cut(s) | 280 |
| BstDSI | CCRYGG | 1 cut(s) | 190 |
| BstF5I | GGATG | 1 cut(s) | 54 |
| BstKTI | GATC | 1 cut(s) | 265 |
| BstMBI | GATC | 1 cut(s) | 262 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 152 |
| BstNI | CCWGG | 1 cut(s) | 291 |
| BstNSI | RCATGY | 1 cut(s) | 37 |
| BstSCI | CCNGG | 1 cut(s) | 289 |
| BstV1I | GCAGC | 1 cut(s) | 111 |
| BtgI | CCRYGG | 1 cut(s) | 190 |
| BtsCI | GGATG | 1 cut(s) | 54 |
| BtsI | GCAGTG | 1 cut(s) | 162 |
| BtsIMutI | CAGTG | 1 cut(s) | 162 |
| Cac8I | GCNNGC | 1 cut(s) | 213 |
| CviAII | CATG | 5 cut(s) | 34, 45, 83, 191, 222 |
| CviJI | RGCY | 7 cut(s) | 15, 25, 121, 146, 284, 297, 338 |
| CviKI_1 | RGCY | 7 cut(s) | 15, 25, 121, 146, 284, 297, 338 |
| DdeI | CTNAG | 1 cut(s) | 280 |
| DpnI | GATC | 1 cut(s) | 264 |
| DpnII | GATC | 1 cut(s) | 262 |
| DriI | GACNNNNNGTC | 1 cut(s) | 37 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 37 |
| Eco130I | CCWWGG | 1 cut(s) | 190 |
| Eco57I | CTGAAG | 2 cut(s) | 45, 183 |
| EcoRII | CCWGG | 1 cut(s) | 289 |
| EcoT14I | CCWWGG | 1 cut(s) | 190 |
| ErhI | CCWWGG | 1 cut(s) | 190 |
| FaeI | CATG | 5 cut(s) | 37, 48, 86, 194, 225 |
| FatI | CATG | 5 cut(s) | 33, 44, 82, 190, 221 |
| FblI | GTMKAC | 2 cut(s) | 8, 41 |
| Fnu4HI | GCNGC | 2 cut(s) | 100, 147 |
| FokI | GGATG | 1 cut(s) | 61 |
| Fsp4HI | GCNGC | 2 cut(s) | 100, 147 |
| FspBI | CTAG | 1 cut(s) | 364 |
| GluI | GCNGC | 2 cut(s) | 100, 147 |
| Hin1II | CATG | 5 cut(s) | 37, 48, 86, 194, 225 |
| HincII | GTYRAC | 3 cut(s) | 9, 31, 42 |
| HindII | GTYRAC | 3 cut(s) | 9, 31, 42 |
| Hpy166II | GTNNAC | 4 cut(s) | 9, 31, 42, 271 |
| Hpy188I | TCNGA | 4 cut(s) | 64, 131, 202, 304 |
| Hpy8I | GTNNAC | 4 cut(s) | 9, 31, 42, 271 |
| HpyCH4III | ACNGT | 3 cut(s) | 71, 116, 138 |
| HpyCH4V | TGCA | 2 cut(s) | 246, 314 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 152 |
| HpyF3I | CTNAG | 1 cut(s) | 280 |
| Hsp92II | CATG | 5 cut(s) | 37, 48, 86, 194, 225 |
| Kzo9I | GATC | 1 cut(s) | 262 |
| LmnI | GCTCC | 2 cut(s) | 126, 152 |
| LpnPI | CCDG | 6 cut(s) | 39, 135, 168, 276, 303, 362 |
| Lsp1109I | GCAGC | 1 cut(s) | 111 |
| LweI | GCATC | 2 cut(s) | 39, 135 |
| MaeI | CTAG | 1 cut(s) | 364 |
| MalI | GATC | 1 cut(s) | 264 |
| MboI | GATC | 1 cut(s) | 262 |
| MboII | GAAGA | 1 cut(s) | 51 |
| MluCI | AATT | 1 cut(s) | 235 |
| MnlI | CCTC | 3 cut(s) | 196, 289, 298 |
| MslI | CAYNNNNRTG | 1 cut(s) | 257 |
| MspA1I | CMGCKG | 1 cut(s) | 284 |
| MspR9I | CCNGG | 1 cut(s) | 291 |
| MvaI | CCWGG | 1 cut(s) | 291 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 152 |
| NcoI | CCATGG | 1 cut(s) | 190 |
| NdeII | GATC | 1 cut(s) | 262 |
| NlaIII | CATG | 5 cut(s) | 37, 48, 86, 194, 225 |
| NmeAIII | GCCGAG | 1 cut(s) | 78 |
| NspI | RCATGY | 1 cut(s) | 37 |
| PkrI | GCNGC | 2 cut(s) | 101, 148 |
| PsiI | TTATAA | 1 cut(s) | 257 |
| Psp6I | CCWGG | 1 cut(s) | 289 |
| PspGI | CCWGG | 1 cut(s) | 289 |
| PvuII | CAGCTG | 1 cut(s) | 284 |
| RseI | CAYNNNNRTG | 1 cut(s) | 257 |
| SalI | GTCGAC | 2 cut(s) | 7, 40 |
| SatI | GCNGC | 2 cut(s) | 100, 147 |
| Sau3AI | GATC | 1 cut(s) | 262 |
| ScrFI | CCNGG | 1 cut(s) | 291 |
| SetI | ASST | 8 cut(s) | 17, 123, 207, 281, 286, 309, 351, 365 |
| SfaNI | GCATC | 2 cut(s) | 39, 135 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 257 |
| Sse9I | AATT | 1 cut(s) | 235 |
| SsiI | CCGC | 2 cut(s) | 124, 147 |
| SspMI | CTAG | 1 cut(s) | 364 |
| StyD4I | CCNGG | 1 cut(s) | 289 |
| StyI | CCWWGG | 1 cut(s) | 190 |
| TaaI | ACNGT | 3 cut(s) | 71, 116, 138 |
| TaqI | TCGA | 3 cut(s) | 8, 19, 41 |
| TasI | AATT | 1 cut(s) | 235 |
| TauI | GCSGC | 1 cut(s) | 149 |
| TscAI | CASTG | 1 cut(s) | 162 |
| TseI | GCWGC | 1 cut(s) | 99 |
| TspDTI | ATGAA | 1 cut(s) | 78 |
| TspRI | CASTG | 1 cut(s) | 162 |
| XceI | RCATGY | 1 cut(s) | 37 |
| XmiI | GTMKAC | 2 cut(s) | 8, 41 |
| XspI | CTAG | 1 cut(s) | 364 |