Rmu_ssc0000239.1_g000010

anion transporter 6

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000239.1
Physical Location & Seq
Reverse (-)
31531 .. 32526
996 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000239.1_g000010.1.cds

Sequence Viewer

Length: 336 bp
atgactctttcttctcttgatctaggattgccccattgggaagttgtgggaattctcactggtggtttagccctttcgagctttgcaatttcaggactttattgtacccatcaagatatatcacccgaatatgcaagcatacttttgggtattaccaatactgttggggcgctacctggagtagtaggcgttgccctcactggctatctacttgattcaactcattcatggagtatgtcattgttccttccatcaatattattctacctgactggtacaattgtttggttggtgtttgccagcagtaagcctcaaacctttacaaagggagattga

Protein Analysis

111

Amino Acids

11.75

Weight (kDa)

4.93

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028575)

Species Orthologous Gene IDs
malus_domestica MD02G1019100.v1.1
rosa_multiflora Rmu_ssc0000239.1_g000010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 51
AfaI GTAC 2 cut(s) 106, 277
AgsI TTSAA 1 cut(s) 219
AjnI CCWGG 1 cut(s) 175
AluBI AGCT 1 cut(s) 81
AluI AGCT 1 cut(s) 81
ApoI RAATTY 1 cut(s) 51
AspLEI GCGC 1 cut(s) 172
AsuHPI GGTGA 1 cut(s) 114
BaeI ACNNNNGTAYC 2 cut(s) 267, 300
BccI CCATC 2 cut(s) 117, 259
BciT130I CCWGG 1 cut(s) 177
BfaI CTAG 1 cut(s) 23
BfoI RGCGCY 1 cut(s) 173
Bme1390I CCNGG 1 cut(s) 177
BmrFI CCNGG 1 cut(s) 177
BpmI CTGGAG 1 cut(s) 198
Bse1I ACTGG 3 cut(s) 64, 205, 277
BseBI CCWGG 1 cut(s) 177
BseNI ACTGG 3 cut(s) 64, 205, 277
Bsp143I GATC 1 cut(s) 19
BsrI ACTGG 3 cut(s) 64, 205, 277
BssMI GATC 1 cut(s) 19
Bst2UI CCWGG 1 cut(s) 177
Bst4CI ACNGT 1 cut(s) 163
BstC8I GCNNGC 2 cut(s) 136, 301
BstH2I RGCGCY 1 cut(s) 173
BstHHI GCGC 1 cut(s) 172
BstKTI GATC 1 cut(s) 22
BstMBI GATC 1 cut(s) 19
BstNI CCWGG 1 cut(s) 177
BstSCI CCNGG 1 cut(s) 175
BtsIMutI CAGTG 2 cut(s) 57, 198
Cac8I GCNNGC 2 cut(s) 136, 301
CfoI GCGC 1 cut(s) 172
Csp6I GTAC 2 cut(s) 105, 276
CviAII CATG 1 cut(s) 228
CviJI RGCY 4 cut(s) 71, 81, 204, 310
CviKI_1 RGCY 4 cut(s) 71, 81, 204, 310
CviQI GTAC 2 cut(s) 105, 276
DpnI GATC 1 cut(s) 21
DpnII GATC 1 cut(s) 19
EcoRI GAATTC 1 cut(s) 51
EcoRII CCWGG 1 cut(s) 175
FaeI CATG 1 cut(s) 231
FaiI YATR 5 cut(s) 119, 132, 140, 229, 236
FatI CATG 1 cut(s) 227
FspBI CTAG 1 cut(s) 23
GlaI GCGC 1 cut(s) 171
GsuI CTGGAG 1 cut(s) 198
HaeII RGCGCY 1 cut(s) 173
HhaI GCGC 1 cut(s) 172
Hin1II CATG 1 cut(s) 231
Hin6I GCGC 1 cut(s) 170
HinP1I GCGC 1 cut(s) 170
HinfI GANTC 2 cut(s) 4, 215
HphI GGTGA 1 cut(s) 114
Hpy188III TCNNGA 3 cut(s) 17, 93, 113
HpyAV CCTTC 1 cut(s) 257
HpyCH4III ACNGT 1 cut(s) 163
HpyCH4V TGCA 2 cut(s) 86, 134
Hsp92II CATG 1 cut(s) 231
HspAI GCGC 1 cut(s) 170
Kzo9I GATC 1 cut(s) 19
LpnPI CCDG 8 cut(s) 45, 78, 162, 186, 189, 258, 281, 313
MaeI CTAG 1 cut(s) 23
MalI GATC 1 cut(s) 21
MboI GATC 1 cut(s) 19
MboII GAAGA 1 cut(s) 3
MfeI CAATTG 1 cut(s) 279
MluCI AATT 3 cut(s) 51, 87, 279
MnlI CCTC 2 cut(s) 206, 321
MspR9I CCNGG 1 cut(s) 177
MunI CAATTG 1 cut(s) 279
MvaI CCWGG 1 cut(s) 177
NdeII GATC 1 cut(s) 19
NlaIII CATG 1 cut(s) 231
PfeI GAWTC 1 cut(s) 215
Psp6I CCWGG 1 cut(s) 175
PspGI CCWGG 1 cut(s) 175
RsaI GTAC 2 cut(s) 106, 277
RsaNI GTAC 2 cut(s) 105, 276
Sau3AI GATC 1 cut(s) 19
ScrFI CCNGG 1 cut(s) 177
SetI ASST 4 cut(s) 83, 178, 270, 320
Sse9I AATT 3 cut(s) 51, 87, 279
SspI AATATT 1 cut(s) 258
SspMI CTAG 1 cut(s) 23
StyD4I CCNGG 1 cut(s) 175
TaaI ACNGT 1 cut(s) 163
TaqI TCGA 1 cut(s) 77
TasI AATT 3 cut(s) 51, 87, 279
TfiI GAWTC 1 cut(s) 215
TscAI CASTG 2 cut(s) 64, 205
TspDTI ATGAA 1 cut(s) 216
TspRI CASTG 2 cut(s) 64, 205
XapI RAATTY 1 cut(s) 51
XspI CTAG 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.