Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0006064

Physical Location & Seq

Genomic Coordinates Forward (+)

27874787 .. 27876963

Gene Structure 2177 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00022580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGGCAGAAGCTGAGGGCGAACCAGGAAGCTCCATGCATGGAGTCACAGGAAGAGAGCAAACATTTGCATTCTCGGTGGCTTCACCTATTGTCCCGACTGATAACACAGCAAAATTTGACCTGCCAGTTGATTCTGAGCACAAGGCTAAAGTCTTCAAGATTTTCTCTTTGGCCAATCCTCATATGAGAACCTTCCACCTATCTTGGATCTCCTTCTTCACTTGCTTTGTATCGACTTTCGCTGCTGCTCCCTCGTCCCTATCATCCGTGACAACCTCAACCTCACCAAGCAAGACATCGGAAATGCTGGAGTTGCTTCTGTTTCAGGTCAGAAATTTCAATGATTTCCTTCATCAATTTCCTAAAAATTCCATTGCCGATTTGTTGTCTTTGGAAGCTGCTATTAACATATCGATGCTTGTAATGGGCGCAGTATGCGACTTACTTGGACCAAGATATGGGTGTGCATTTCTCGTAATGCTTAGCGCACCCACAGTGTTTTGCATGTCATTTGTAGCAGATGCTGGGGGTTACTTAGCCGTGAGGTTCATGATTGGTTTCTCTCTGGCTACATTTGTTTCTTGCCAGTACTGGATGAGCACCATGTTCAACAGCAAGATCATAGGTTTGGTCAATGGAACAGCAGCAGGGTGGGGTAACATGGGTGGTGGCGCCACTCAGCTCTTGATGCCTCTGGTGTTTGATATTATCGGCCGAGCCGGAGCAACTCCTTTCACTGCTTGGAGAATTGCCTTCTTCATTCCTGGTTGGCTTCATATCATTATGGGCATAATGGTCTTGACTCTTGGCCAAGACTTGCCTGATGGGAATCTTGGTGCCCTACAAAAGAAGGGTGAAGTTGCGAAAGATGAATTTAAAAAGGTGTTGTGGTACGCTATCACAAACTACAGGACGTGGGTCTTTGTCCTTCTCTATGGCTACTCCATGGGCGTTGAGTTGTCAACTGATAATGTCATTGCTGAGTATTTCTATGACAGATTCAACCTCAAGCTTCACACTGCCGGGCTCATTGCCGCCACATTCGGCATGGCCAACTTCCTAGCTCGACCCTTTGGTGGGTATGCTTCCGATCTAGCAGCCAGGTACTTTGGCATGAGGGGCAGGCTGTGGACCCTCTGGATCCTCCAAAGCCTAGGAGGAGTCTTCTGCATCTGGCTTGGCCGAGCCAGCACGCTCCCCATCGCCGTCACGGCCATGATCCTCTTTTCCGTAGGCGCTCAGGCCGCCTGTGGAGCAACTTTTGGAATCATCCCATTCATTTCACGACGATCCCTAGGGATCATATCCGGTCTCACCGGTGCTGGCGGGAACTTTGGCTCCGGACTAACCCAACTCGTGTTTTTCTCATCCTCAGCCTTCTCCACAGGCACTGGTCTATCCTGGATGGGCGTTATGATCGTGTGCTGCACTTTGCCAGTGACTTTGGTTCATTTTCCACAGTGGGGAAGCATGTTCCTCCCAGCTTCTCAACACGTTGAGAAATCTACTGAAGAGTTTTATTATGGGTCTGAGTGGACAGAGGAAGAGAAGCAAAAGGGTTTGCACCAGCAGAGTATCAAGTTTGCAGAGAATAGTAGGTCTGAGCGTGGTAGGCGCGTGGCATCTGCTCCCACTCCACCCAACACCACACCTTCCCATGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008509 GO:0009705 GO:0009987 GO:0010035 GO:0010167 GO:0015075 GO:0015103 GO:0015112 GO:0015318 GO:0015698 GO:0015706 GO:0016020 GO:0022857 GO:0031090 GO:0034220 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0070887 GO:0071229 GO:0071241 GO:0071249 GO:0071705 GO:0071944 GO:0098588 GO:0098656 GO:0098805 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170

KEGG Pathways

Metabolic & Signaling

ko00910 map00910

Pfam Domains

Protein Families

MFS_1

Protein Analysis

554

Amino Acids

60.32

Weight (kDa)

8.03

Isoelectric Point (pI)

38.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	134 - 449	5e-13	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006064)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08090 AT1G08100 AT3G45060 AT5G60770 AT5G60780
fragaria_vesca	FvH4_3g31240 FvH4_6g02140
malus_domestica	MD11G1141700.v1.1
prunus_persica	Prupe.6G107400_v2.0.a1 Prupe.6G107500_v2.0.a1
pyrus_communis	pycom11g11770 pycom11g11780
rosa_chinensis	RchiOBHm_Chr5g0057851 RchiOBHm_Chr5g0057861
rosa_laevigata	RLG00000035186 RLG00000035188
rosa_multiflora	Rmu_sc0016426.1_g000006
rosa_roxburghii	Rroxscaffold_1G00022580 Rroxscaffold_1G00022600
rosa_rugosa	Rorug05G0310200.1
rosa_samantha	Rh5AG378900 Rh5BG390000 Rh5CG413800 Rh5DG404400 Rh5DG404500
rosa_wichuraiana	Rw5G035680 Rw5G035690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	129
AccB1I	GGYRCC	2 cut(s)	671, 836
AccB7I	CCANNNNNTGG	1 cut(s)	458
AccII	CGCG	1 cut(s)	1617
AccIII	TCCGGA	1 cut(s)	1340
AciI	CCGC	3 cut(s)	1035, 1245, 1326
AclWI	GGATC	6 cut(s)	215, 1135, 1148, 1213, 1284, 1307
AcoI	YGGCCR	6 cut(s)	171, 712, 808, 1050, 1180, 1212
AcsI	RAATTY	4 cut(s)	113, 334, 367, 872
AcuI	CTGAAG	1 cut(s)	1530
AcyI	GRCGYC	1 cut(s)	672
AfaI	GTAC	3 cut(s)	590, 893, 1106
AfiI	CCNNNNNNNGG	4 cut(s)	458, 1076, 1077, 1463
AflIII	ACRYGT	1 cut(s)	1492
AgeI	ACCGGT	1 cut(s)	1316
AgsI	TTSAA	4 cut(s)	157, 340, 610, 1003
AjiI	CACGTC	1 cut(s)	915
AjnI	CCWGG	4 cut(s)	22, 763, 1100, 1400
AloI	GAACNNNNNNTCC	2 cut(s)	1322, 1354
AluBI	AGCT	7 cut(s)	11, 30, 398, 682, 1012, 1064, 1484
AluI	AGCT	7 cut(s)	11, 30, 398, 682, 1012, 1064, 1484
Alw21I	GWGCWC	2 cut(s)	141, 602
Alw26I	GTCTC	1 cut(s)	1316
AlwI	GGATC	6 cut(s)	215, 1135, 1148, 1213, 1284, 1307
AlwNI	CAGNNNCTG	3 cut(s)	11, 524, 1391
Aor13HI	TCCGGA	1 cut(s)	1340
AoxI	GGCC	7 cut(s)	171, 712, 808, 1050, 1180, 1212, 1242
ApeKI	GCWGC	6 cut(s)	242, 245, 398, 644, 1097, 1425
ApoI	RAATTY	4 cut(s)	113, 334, 367, 872
AsiGI	ACCGGT	1 cut(s)	1316
AspA2I	CCTAGG	2 cut(s)	1153, 1294
AspLEI	GCGC	5 cut(s)	431, 488, 674, 1238, 1617
AspS9I	GGNCC	2 cut(s)	449, 1131
AsuC2I	CCSGG	1 cut(s)	1024
AsuHPI	GGTGA	4 cut(s)	75, 276, 866, 1306
AvaII	GGWCC	2 cut(s)	449, 1131
AvrII	CCTAGG	2 cut(s)	1153, 1294
BaeGI	GKGCMC	1 cut(s)	841
BalI	TGGCCA	3 cut(s)	173, 810, 1052
BamHI	GGATCC	1 cut(s)	1140
BanI	GGYRCC	2 cut(s)	671, 836
BanII	GRGCYC	1 cut(s)	1029
BauI	CACGAG	1 cut(s)	1355
BbsI	GAAGAC	2 cut(s)	145, 1156
Bbv12I	GWGCWC	2 cut(s)	141, 602
BbvCI	CCTCAGC	2 cut(s)	12, 1372
BbvI	GCAGC	6 cut(s)	229, 232, 385, 656, 1109, 1412
BccI	CCATC	3 cut(s)	818, 1208, 1399
BceAI	ACGGC	3 cut(s)	524, 1190, 1227
BciT130I	CCWGG	4 cut(s)	24, 765, 1102, 1402
BcnI	CCSGG	1 cut(s)	1024
BcoDI	GTCTC	1 cut(s)	1316
BfaI	CTAG	4 cut(s)	1061, 1094, 1154, 1295
BfmI	CTRYAG	1 cut(s)	907
BfoI	RGCGCY	2 cut(s)	675, 1239
BfuAI	ACCTGC	1 cut(s)	129
BglI	GCCNNNNNGGC	1 cut(s)	1211
BisI	GCNGC	8 cut(s)	243, 246, 399, 645, 1035, 1098, 1245, 1426
BlnI	CCTAGG	2 cut(s)	1153, 1294
BlpI	GCTNAGC	1 cut(s)	482
BlsI	GCNGC	8 cut(s)	244, 247, 400, 646, 1036, 1099, 1246, 1427
BmcAI	AGTACT	1 cut(s)	590
Bme1390I	CCNGG	5 cut(s)	24, 765, 1024, 1102, 1402
Bme18I	GGWCC	2 cut(s)	449, 1131
BmgBI	CACGTC	1 cut(s)	915
BmgT120I	GGNCC	2 cut(s)	449, 1131
BmiI	GGNNCC	5 cut(s)	673, 838, 1133, 1142, 1339
BmrFI	CCNGG	5 cut(s)	24, 765, 1024, 1102, 1402
BmsI	GCATC	5 cut(s)	405, 511, 678, 1179, 1631
BoxI	GACNNNNGTC	1 cut(s)	917
BpiI	GAAGAC	2 cut(s)	145, 1156
BpmI	CTGGAG	1 cut(s)	329
Bpu10I	CCTNAGC	3 cut(s)	12, 1239, 1372
Bpu1102I	GCTNAGC	1 cut(s)	482
BpuEI	CTTGAG	1 cut(s)	992
BpuMI	CCSGG	1 cut(s)	1024
Bsa29I	ATCGAT	1 cut(s)	413
BsaBI	GATNNNNATC	1 cut(s)	828
BsaHI	GRCGYC	1 cut(s)	672
BsaI	GGTCTC	1 cut(s)	1316
BsaJI	CCNNGG	3 cut(s)	945, 1153, 1294
BsaWI	WCCGGW	3 cut(s)	1307, 1316, 1340
BsaXI	ACNNNNNCTCC	2 cut(s)	1322, 1352
Bsc4I	CCNNNNNNNGG	4 cut(s)	458, 1076, 1077, 1463
Bse118I	RCCGGY	1 cut(s)	1316
Bse1I	ACTGG	5 cut(s)	125, 586, 596, 1396, 1436
Bse3DI	GCAATG	3 cut(s)	372, 975, 1029
Bse8I	GATNNNNATC	1 cut(s)	828
BseAI	TCCGGA	1 cut(s)	1340
BseBI	CCWGG	4 cut(s)	24, 765, 1102, 1402
BseCI	ATCGAT	1 cut(s)	413
BseDI	CCNNGG	3 cut(s)	945, 1153, 1294
BseGI	GGATG	5 cut(s)	263, 600, 1269, 1367, 1410
BseJI	GATNNNNATC	1 cut(s)	828
BseLI	CCNNNNNNNGG	4 cut(s)	458, 1076, 1077, 1463
BseMI	GCAATG	3 cut(s)	372, 975, 1029
BseMII	CTCAG	7 cut(s)	126, 692, 972, 1253, 1386, 1521, 1593
BseNI	ACTGG	5 cut(s)	125, 586, 596, 1396, 1436
BseRI	GAGGAG	1 cut(s)	1173
BseSI	GKGCMC	1 cut(s)	841
BseX3I	CGGCCG	1 cut(s)	712
BseXI	GCAGC	6 cut(s)	229, 232, 385, 656, 1109, 1412
BseYI	CCCAGC	2 cut(s)	524, 1480
BsgI	GTGCAG	1 cut(s)	1411
Bsh1236I	CGCG	1 cut(s)	1617
Bsh1285I	CGRYCG	1 cut(s)	715
BshFI	GGCC	7 cut(s)	173, 714, 810, 1052, 1182, 1214, 1244
BshNI	GGYRCC	2 cut(s)	671, 836
BshTI	ACCGGT	1 cut(s)	1316
BshVI	ATCGAT	1 cut(s)	413
BsiEI	CGRYCG	1 cut(s)	715
BsiHKAI	GWGCWC	2 cut(s)	141, 602
BsiSI	CCGG	5 cut(s)	720, 1023, 1308, 1317, 1341
BslFI	GGGAC	2 cut(s)	77, 241
BslI	CCNNNNNNNGG	4 cut(s)	458, 1076, 1077, 1463
BsmAI	GTCTC	1 cut(s)	1316
BsmFI	GGGAC	2 cut(s)	77, 241
BsmI	GAATGC	1 cut(s)	68
BsnI	GGCC	7 cut(s)	173, 714, 810, 1052, 1182, 1214, 1244
Bso31I	GGTCTC	1 cut(s)	1316
Bsp1286I	GDGCHC	4 cut(s)	141, 602, 841, 1029
Bsp13I	TCCGGA	1 cut(s)	1340
Bsp143I	GATC	8 cut(s)	207, 618, 1090, 1140, 1218, 1289, 1299, 1416
Bsp1720I	GCTNAGC	1 cut(s)	482
Bsp19I	CCATGG	1 cut(s)	945
BspACI	CCGC	3 cut(s)	1035, 1245, 1326
BspANI	GGCC	7 cut(s)	173, 714, 810, 1052, 1182, 1214, 1244
BspCNI	CTCAG	8 cut(s)	4, 127, 691, 973, 1252, 1385, 1522, 1594
BspDI	ATCGAT	1 cut(s)	413
BspEI	TCCGGA	1 cut(s)	1340
BspFNI	CGCG	1 cut(s)	1617
BspHI	TCATGA	1 cut(s)	549
BspLI	GGNNCC	5 cut(s)	673, 838, 1133, 1142, 1339
BspMI	ACCTGC	1 cut(s)	129
BspPI	GGATC	6 cut(s)	215, 1135, 1148, 1213, 1284, 1307
BspT107I	GGYRCC	2 cut(s)	671, 836
BspTNI	GGTCTC	1 cut(s)	1316
BsrDI	GCAATG	3 cut(s)	372, 975, 1029
BsrFI	RCCGGY	1 cut(s)	1316
BsrI	ACTGG	5 cut(s)	125, 586, 596, 1396, 1436
BssAI	RCCGGY	1 cut(s)	1316
BssECI	CCNNGG	3 cut(s)	945, 1153, 1294
BssMI	GATC	8 cut(s)	207, 618, 1090, 1140, 1218, 1289, 1299, 1416
BssNI	GRCGYC	1 cut(s)	672
BssSI	CACGAG	1 cut(s)	1355
BssT1I	CCWWGG	3 cut(s)	945, 1153, 1294
Bst2BI	CACGAG	1 cut(s)	1355
Bst2UI	CCWGG	4 cut(s)	24, 765, 1102, 1402
Bst4CI	ACNGT	2 cut(s)	496, 1461
Bst6I	CTCTTC	3 cut(s)	46, 1506, 1539
BstACI	GRCGYC	1 cut(s)	672
BstC8I	GCNNGC	4 cut(s)	1124, 1189, 1193, 1324
BstDSI	CCRYGG	1 cut(s)	945
BstF5I	GGATG	5 cut(s)	263, 600, 1269, 1367, 1410
BstFNI	CGCG	1 cut(s)	1617
BstH2I	RGCGCY	2 cut(s)	675, 1239
BstHHI	GCGC	5 cut(s)	431, 488, 674, 1238, 1617
BstKTI	GATC	8 cut(s)	210, 621, 1093, 1143, 1221, 1292, 1302, 1419
BstMAI	GTCTC	1 cut(s)	1316
BstMBI	GATC	8 cut(s)	207, 618, 1090, 1140, 1218, 1289, 1299, 1416
BstMCI	CGRYCG	1 cut(s)	715
BstMWI	GCNNNNNNNGC	9 cut(s)	313, 435, 688, 1119, 1188, 1211, 1244, 1253, 1612
BstNI	CCWGG	4 cut(s)	24, 765, 1102, 1402
BstNSI	RCATGY	2 cut(s)	508, 1474
BstPAI	GACNNNNGTC	1 cut(s)	917
BstSCI	CCNGG	5 cut(s)	22, 763, 1022, 1100, 1400
BstSFI	CTRYAG	1 cut(s)	907
BstSLI	GKGCMC	1 cut(s)	841
BstUI	CGCG	1 cut(s)	1617
BstV1I	GCAGC	6 cut(s)	229, 232, 385, 656, 1109, 1412
BstV2I	GAAGAC	2 cut(s)	145, 1156
BstX2I	RGATCY	2 cut(s)	207, 1140
BstYI	RGATCY	2 cut(s)	207, 1140
BstZI	CGGCCG	1 cut(s)	712
Bsu15I	ATCGAT	1 cut(s)	413
BsuRI	GGCC	7 cut(s)	173, 714, 810, 1052, 1182, 1214, 1244
BsuTUI	ATCGAT	1 cut(s)	413
BtgI	CCRYGG	1 cut(s)	945
BtgZI	GCGATG	1 cut(s)	1186
BtrI	CACGTC	1 cut(s)	915
BtsCI	GGATG	5 cut(s)	263, 600, 1269, 1367, 1410
BtsI	GCAGTG	2 cut(s)	735, 1017
BtsIMutI	CAGTG	6 cut(s)	501, 735, 1017, 1389, 1443, 1466
BveI	ACCTGC	1 cut(s)	129
Cac8I	GCNNGC	4 cut(s)	1124, 1189, 1193, 1324
CaiI	CAGNNNCTG	3 cut(s)	11, 524, 1391
CciI	TCATGA	1 cut(s)	549
CfoI	GCGC	5 cut(s)	431, 488, 674, 1238, 1617
Cfr10I	RCCGGY	1 cut(s)	1316
Cfr13I	GGNCC	2 cut(s)	449, 1131
ClaI	ATCGAT	1 cut(s)	413
Csp6I	GTAC	3 cut(s)	589, 892, 1105
CspAI	ACCGGT	1 cut(s)	1316
CspCI	CAANNNNNGTGG	2 cut(s)	185, 220
CviQI	GTAC	3 cut(s)	589, 892, 1105
DinI	GGCGCC	1 cut(s)	673
DpnI	GATC	8 cut(s)	209, 620, 1092, 1142, 1220, 1291, 1301, 1418
DpnII	GATC	8 cut(s)	207, 618, 1090, 1140, 1218, 1289, 1299, 1416
DraI	TTTAAA	1 cut(s)	877
EaeI	YGGCCR	6 cut(s)	171, 712, 808, 1050, 1180, 1212
EagI	CGGCCG	1 cut(s)	712
Eam1104I	CTCTTC	3 cut(s)	46, 1506, 1539
EarI	CTCTTC	3 cut(s)	46, 1506, 1539
EclXI	CGGCCG	1 cut(s)	712
Eco130I	CCWWGG	3 cut(s)	945, 1153, 1294
Eco24I	GRGCYC	1 cut(s)	1029
Eco31I	GGTCTC	1 cut(s)	1316
Eco47I	GGWCC	2 cut(s)	449, 1131
Eco52I	CGGCCG	1 cut(s)	712
Eco57I	CTGAAG	1 cut(s)	1530
EcoRII	CCWGG	4 cut(s)	22, 763, 1100, 1400
EcoT14I	CCWWGG	3 cut(s)	945, 1153, 1294
EcoT22I	ATGCAT	1 cut(s)	39
EcoT38I	GRGCYC	1 cut(s)	1029
EgeI	GGCGCC	1 cut(s)	673
EheI	GGCGCC	1 cut(s)	673
ErhI	CCWWGG	3 cut(s)	945, 1153, 1294
FaqI	GGGAC	2 cut(s)	77, 241
FauI	CCCGC	1 cut(s)	1319
FauNDI	CATATG	1 cut(s)	183
Fnu4HI	GCNGC	8 cut(s)	243, 246, 399, 645, 1035, 1098, 1245, 1426
FokI	GGATG	5 cut(s)	250, 607, 1256, 1354, 1417
FriOI	GRGCYC	1 cut(s)	1029
Fsp4HI	GCNGC	8 cut(s)	243, 246, 399, 645, 1035, 1098, 1245, 1426
FspBI	CTAG	4 cut(s)	1061, 1094, 1154, 1295
GlaI	GCGC	5 cut(s)	430, 487, 673, 1237, 1616
GluI	GCNGC	8 cut(s)	243, 246, 399, 645, 1035, 1098, 1245, 1426
GsaI	CCCAGC	2 cut(s)	528, 1484
GsuI	CTGGAG	1 cut(s)	329
HaeII	RGCGCY	2 cut(s)	675, 1239
HaeIII	GGCC	7 cut(s)	173, 714, 810, 1052, 1182, 1214, 1244
HapII	CCGG	5 cut(s)	720, 1023, 1308, 1317, 1341
HhaI	GCGC	5 cut(s)	431, 488, 674, 1238, 1617
Hin1I	GRCGYC	1 cut(s)	672
Hin6I	GCGC	5 cut(s)	429, 486, 672, 1236, 1615
HinP1I	GCGC	5 cut(s)	429, 486, 672, 1236, 1615
HincII	GTYRAC	1 cut(s)	963
HindII	GTYRAC	1 cut(s)	963
HindIII	AAGCTT	1 cut(s)	1010
HinfI	GANTC	7 cut(s)	42, 131, 802, 829, 999, 1161, 1266
HpaII	CCGG	5 cut(s)	720, 1023, 1308, 1317, 1341
HphI	GGTGA	4 cut(s)	75, 276, 866, 1306
Hpy166II	GTNNAC	3 cut(s)	963, 1131, 1536
Hpy188I	TCNGA	6 cut(s)	136, 301, 332, 1090, 1531, 1603
Hpy188III	TCNNGA	8 cut(s)	94, 157, 550, 685, 799, 1138, 1284, 1341
Hpy8I	GTNNAC	3 cut(s)	963, 1131, 1536
Hpy99I	CGWCG	1 cut(s)	1290
HpyAV	CCTTC	8 cut(s)	202, 223, 359, 763, 844, 938, 1387, 1662
HpyCH4III	ACNGT	2 cut(s)	496, 1461
HpyCH4IV	ACGT	2 cut(s)	914, 1494
HpyCH4V	TGCA	8 cut(s)	37, 68, 467, 504, 1170, 1428, 1564, 1586
HpyF10VI	GCNNNNNNNGC	9 cut(s)	313, 435, 688, 1119, 1188, 1211, 1244, 1253, 1612
HpySE526I	ACGT	2 cut(s)	914, 1494
Hsp92I	GRCGYC	1 cut(s)	672
HspAI	GCGC	5 cut(s)	429, 486, 672, 1236, 1615
KasI	GGCGCC	1 cut(s)	671
Kpn2I	TCCGGA	1 cut(s)	1340
Kzo9I	GATC	8 cut(s)	207, 618, 1090, 1140, 1218, 1289, 1299, 1416
LmnI	GCTCC	7 cut(s)	35, 253, 722, 1200, 1253, 1343, 1633
Lsp1109I	GCAGC	6 cut(s)	229, 232, 385, 656, 1109, 1412
LweI	GCATC	5 cut(s)	405, 511, 678, 1179, 1631
MaeI	CTAG	4 cut(s)	1061, 1094, 1154, 1295
MaeII	ACGT	2 cut(s)	914, 1494
MaeIII	GTNAC	6 cut(s)	43, 268, 530, 656, 1207, 1438
MalI	GATC	8 cut(s)	209, 620, 1092, 1142, 1220, 1291, 1301, 1418
MboI	GATC	8 cut(s)	207, 618, 1090, 1140, 1218, 1289, 1299, 1416
MboII	GAAGA	7 cut(s)	63, 145, 208, 748, 1156, 1523, 1556
MflI	RGATCY	2 cut(s)	207, 1140
MhlI	GDGCHC	4 cut(s)	141, 602, 841, 1029
MlsI	TGGCCA	3 cut(s)	173, 810, 1052
MluCI	AATT	6 cut(s)	113, 334, 356, 367, 747, 872
MluNI	TGGCCA	3 cut(s)	173, 810, 1052
Mly113I	GGCGCC	1 cut(s)	672
MlyI	GAGTC	3 cut(s)	51, 796, 1170
Mox20I	TGGCCA	3 cut(s)	173, 810, 1052
Mph1103I	ATGCAT	1 cut(s)	39
MroI	TCCGGA	1 cut(s)	1340
MscI	TGGCCA	3 cut(s)	173, 810, 1052
MseI	TTAA	2 cut(s)	405, 876
MslI	CAYNNNNRTG	2 cut(s)	413, 1214
Msp20I	TGGCCA	3 cut(s)	173, 810, 1052
MspI	CCGG	5 cut(s)	720, 1023, 1308, 1317, 1341
MspR9I	CCNGG	5 cut(s)	24, 765, 1024, 1102, 1402
Mva1269I	GAATGC	1 cut(s)	68
MvaI	CCWGG	4 cut(s)	24, 765, 1102, 1402
MvnI	CGCG	1 cut(s)	1617
MwoI	GCNNNNNNNGC	9 cut(s)	313, 435, 688, 1119, 1188, 1211, 1244, 1253, 1612
NarI	GGCGCC	1 cut(s)	672
NciI	CCSGG	1 cut(s)	1024
NcoI	CCATGG	1 cut(s)	945
NdeI	CATATG	1 cut(s)	183
NdeII	GATC	8 cut(s)	207, 618, 1090, 1140, 1218, 1289, 1299, 1416
NlaIV	GGNNCC	5 cut(s)	673, 838, 1133, 1142, 1339
NmeAIII	GCCGAG	2 cut(s)	740, 1208
NmuCI	GTSAC	4 cut(s)	43, 268, 1207, 1438
NsiI	ATGCAT	1 cut(s)	39
NspI	RCATGY	2 cut(s)	508, 1474
PagI	TCATGA	1 cut(s)	549
PctI	GAATGC	1 cut(s)	68
PfeI	GAWTC	4 cut(s)	131, 829, 999, 1266
PflMI	CCANNNNNTGG	1 cut(s)	458
PfoI	TCCNGGA	1 cut(s)	1400
PinAI	ACCGGT	1 cut(s)	1316
PkrI	GCNGC	8 cut(s)	244, 247, 400, 646, 1036, 1099, 1246, 1427
PleI	GAGTC	3 cut(s)	50, 796, 1169
PluTI	GGCGCC	1 cut(s)	675
PpsI	GAGTC	3 cut(s)	50, 796, 1169
PshAI	GACNNNNGTC	1 cut(s)	917
Psp6I	CCWGG	4 cut(s)	22, 763, 1100, 1400
PspFI	CCCAGC	2 cut(s)	524, 1480
PspGI	CCWGG	4 cut(s)	22, 763, 1100, 1400
PspN4I	GGNNCC	5 cut(s)	673, 838, 1133, 1142, 1339
PspPI	GGNCC	2 cut(s)	449, 1131
PstNI	CAGNNNCTG	3 cut(s)	11, 524, 1391
PsuI	RGATCY	2 cut(s)	207, 1140
RsaI	GTAC	3 cut(s)	590, 893, 1106
RsaNI	GTAC	3 cut(s)	589, 892, 1105
RseI	CAYNNNNRTG	2 cut(s)	413, 1214
SaqAI	TTAA	2 cut(s)	405, 876
SatI	GCNGC	8 cut(s)	243, 246, 399, 645, 1035, 1098, 1245, 1426
Sau3AI	GATC	8 cut(s)	207, 618, 1090, 1140, 1218, 1289, 1299, 1416
Sau96I	GGNCC	2 cut(s)	449, 1131
ScaI	AGTACT	1 cut(s)	590
SchI	GAGTC	3 cut(s)	51, 796, 1170
ScrFI	CCNGG	5 cut(s)	24, 765, 1024, 1102, 1402
SduI	GDGCHC	4 cut(s)	141, 602, 841, 1029
SfaNI	GCATC	5 cut(s)	405, 511, 678, 1179, 1631
SfcI	CTRYAG	1 cut(s)	907
SfoI	GGCGCC	1 cut(s)	673
SgrAI	CRCCGGYG	1 cut(s)	1316
SinI	GGWCC	2 cut(s)	449, 1131
SmiMI	CAYNNNNRTG	2 cut(s)	413, 1214
SmlI	CTYRAG	1 cut(s)	1007
SmoI	CTYRAG	1 cut(s)	1007
Sse9I	AATT	6 cut(s)	113, 334, 356, 367, 747, 872
SsiI	CCGC	3 cut(s)	1035, 1245, 1326
SspDI	GGCGCC	1 cut(s)	671
SspMI	CTAG	4 cut(s)	1061, 1094, 1154, 1295
StyD4I	CCNGG	5 cut(s)	22, 763, 1022, 1100, 1400
StyI	CCWWGG	3 cut(s)	945, 1153, 1294
TaaI	ACNGT	2 cut(s)	496, 1461
TaiI	ACGT	2 cut(s)	917, 1497
TaqI	TCGA	3 cut(s)	233, 413, 1066
TasI	AATT	6 cut(s)	113, 334, 356, 367, 747, 872
TatI	WGTACW	1 cut(s)	588
TauI	GCSGC	2 cut(s)	1037, 1247
TfiI	GAWTC	4 cut(s)	131, 829, 999, 1266
Tru1I	TTAA	2 cut(s)	405, 876
Tru9I	TTAA	2 cut(s)	405, 876
TscAI	CASTG	6 cut(s)	501, 742, 1024, 1396, 1443, 1466
TseFI	GTSAC	4 cut(s)	43, 268, 1207, 1438
TseI	GCWGC	6 cut(s)	242, 245, 398, 644, 1097, 1425
Tsp45I	GTSAC	4 cut(s)	43, 268, 1207, 1438
TspDTI	ATGAA	7 cut(s)	341, 538, 748, 764, 885, 1267, 1439
TspGWI	ACGGA	2 cut(s)	256, 1219
TspRI	CASTG	6 cut(s)	501, 742, 1024, 1396, 1443, 1466
Van91I	CCANNNNNTGG	1 cut(s)	458
VpaK11BI	GGWCC	2 cut(s)	449, 1131
XapI	RAATTY	4 cut(s)	113, 334, 367, 872
XceI	RCATGY	2 cut(s)	508, 1474
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1045
XmaJI	CCTAGG	2 cut(s)	1153, 1294
XspI	CTAG	4 cut(s)	1061, 1094, 1154, 1295
ZrmI	AGTACT	1 cut(s)	590
Zsp2I	ATGCAT	1 cut(s)	39

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.