Rroxscaffold_2G00144650

Adipocyte plasma membrane-associated

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
82561856 .. 82565083
3228 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00144650.1

Sequence Viewer

Length: 357 bp
ATGAAGATGGATGATGGTGTGCACGGTTTTTTGCTCTTGAAGGACTTGGGAATTTCAAGATTTTGTGTGCTAGGGTTTATGGCAGAAGATGGCGCTGTAGGGAGATTACGATTCTTGGAATCTAGCACTTGGGTTCCCTTTTATTCAAAAATGGCTGCAATCATGGAGAAGTATACAGCAGGAAGACCCCATATGGAGAAAAATTCTGGTGTAATGGCTGTTAATTTGGAATGGGAACTTATTGCCCACTATTTTGATATAGGGTTACCACTCATTCCAAGTGGGATCAAGATTGGAAATTACCTATACCGCAGTTCAATTATCTATCCATACATTATCCACTTCGATCCGGAATGA
Functional Annotation

Protein Analysis

118

Amino Acids

13.42

Weight (kDa)

6.05

Isoelectric Point (pI)

37.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031342)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0005347.1_g000003
rosa_roxburghii Rroxscaffold_2G00144650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 173
AccIII TCCGGA 1 cut(s) 349
AciI CCGC 1 cut(s) 310
AclWI GGATC 2 cut(s) 293, 341
AcsI RAATTY 2 cut(s) 51, 202
AgsI TTSAA 4 cut(s) 40, 57, 147, 318
Alw21I GWGCWC 1 cut(s) 24
Alw44I GTGCAC 1 cut(s) 20
AlwI GGATC 2 cut(s) 293, 341
Aor13HI TCCGGA 1 cut(s) 349
ApaLI GTGCAC 1 cut(s) 20
ApeKI GCWGC 1 cut(s) 155
ApoI RAATTY 2 cut(s) 51, 202
AspLEI GCGC 1 cut(s) 95
BaeGI GKGCMC 1 cut(s) 24
BbsI GAAGAC 1 cut(s) 190
Bbv12I GWGCWC 1 cut(s) 24
BbvI GCAGC 1 cut(s) 142
BccI CCATC 2 cut(s) 8, 83
BfaI CTAG 2 cut(s) 71, 123
BfmI CTRYAG 1 cut(s) 96
BfoI RGCGCY 1 cut(s) 96
BisI GCNGC 1 cut(s) 156
BlsI GCNGC 1 cut(s) 157
BmiI GGNNCC 1 cut(s) 135
BpiI GAAGAC 1 cut(s) 190
BsaWI WCCGGW 1 cut(s) 349
BseAI TCCGGA 1 cut(s) 349
BseGI GGATG 1 cut(s) 16
BseSI GKGCMC 1 cut(s) 24
BseXI GCAGC 1 cut(s) 142
BsiHKAI GWGCWC 1 cut(s) 24
BsiSI CCGG 1 cut(s) 350
Bsp1286I GDGCHC 1 cut(s) 24
Bsp13I TCCGGA 1 cut(s) 349
Bsp143I GATC 2 cut(s) 285, 346
BspACI CCGC 1 cut(s) 310
BspEI TCCGGA 1 cut(s) 349
BspLI GGNNCC 1 cut(s) 135
BspPI GGATC 2 cut(s) 293, 341
BssMI GATC 2 cut(s) 285, 346
BssNAI GTATAC 1 cut(s) 174
Bst1107I GTATAC 1 cut(s) 174
Bst4CI ACNGT 1 cut(s) 26
BstEII GGTNACC 1 cut(s) 264
BstF5I GGATG 1 cut(s) 16
BstH2I RGCGCY 1 cut(s) 96
BstHHI GCGC 1 cut(s) 95
BstKTI GATC 2 cut(s) 288, 349
BstMBI GATC 2 cut(s) 285, 346
BstPI GGTNACC 1 cut(s) 264
BstSFI CTRYAG 1 cut(s) 96
BstSLI GKGCMC 1 cut(s) 24
BstV1I GCAGC 1 cut(s) 142
BstV2I GAAGAC 1 cut(s) 190
BstZ17I GTATAC 1 cut(s) 174
BtsCI GGATG 1 cut(s) 16
CfoI GCGC 1 cut(s) 95
CviAII CATG 1 cut(s) 163
CviJI RGCY 2 cut(s) 155, 218
CviKI_1 RGCY 2 cut(s) 155, 218
DpnI GATC 2 cut(s) 287, 348
DpnII GATC 2 cut(s) 285, 346
Eco91I GGTNACC 1 cut(s) 264
EcoO65I GGTNACC 1 cut(s) 264
FaeI CATG 1 cut(s) 166
FaiI YATR 8 cut(s) 80, 164, 174, 192, 194, 260, 307, 331
FatI CATG 1 cut(s) 162
FauNDI CATATG 1 cut(s) 192
FblI GTMKAC 1 cut(s) 173
Fnu4HI GCNGC 1 cut(s) 156
FokI GGATG 1 cut(s) 23
Fsp4HI GCNGC 1 cut(s) 156
FspBI CTAG 2 cut(s) 71, 123
GlaI GCGC 1 cut(s) 94
GluI GCNGC 1 cut(s) 156
HaeII RGCGCY 1 cut(s) 96
HapII CCGG 1 cut(s) 350
HhaI GCGC 1 cut(s) 95
Hin1II CATG 1 cut(s) 166
Hin6I GCGC 1 cut(s) 93
HinP1I GCGC 1 cut(s) 93
HinfI GANTC 2 cut(s) 111, 119
HpaII CCGG 1 cut(s) 350
Hpy166II GTNNAC 2 cut(s) 22, 174
Hpy188III TCNNGA 4 cut(s) 37, 57, 289, 350
Hpy8I GTNNAC 2 cut(s) 22, 174
HpyAV CCTTC 1 cut(s) 34
HpyCH4III ACNGT 1 cut(s) 26
HpyCH4V TGCA 2 cut(s) 22, 158
Hsp92II CATG 1 cut(s) 166
HspAI GCGC 1 cut(s) 93
Kpn2I TCCGGA 1 cut(s) 349
Kzo9I GATC 2 cut(s) 285, 346
LpnPI CCDG 2 cut(s) 165, 192
Lsp1109I GCAGC 1 cut(s) 142
MaeI CTAG 2 cut(s) 71, 123
MaeIII GTNAC 1 cut(s) 264
MalI GATC 2 cut(s) 287, 348
MboI GATC 2 cut(s) 285, 346
MboII GAAGA 3 cut(s) 16, 98, 195
MhlI GDGCHC 1 cut(s) 24
MluCI AATT 5 cut(s) 51, 202, 223, 298, 318
MroI TCCGGA 1 cut(s) 349
MseI TTAA 1 cut(s) 222
MspI CCGG 1 cut(s) 350
NdeI CATATG 1 cut(s) 192
NdeII GATC 2 cut(s) 285, 346
NlaIII CATG 1 cut(s) 166
NlaIV GGNNCC 1 cut(s) 135
PfeI GAWTC 2 cut(s) 111, 119
PkrI GCNGC 1 cut(s) 157
PspEI GGTNACC 1 cut(s) 264
PspN4I GGNNCC 1 cut(s) 135
SaqAI TTAA 1 cut(s) 222
SatI GCNGC 1 cut(s) 156
Sau3AI GATC 2 cut(s) 285, 346
SduI GDGCHC 1 cut(s) 24
SetI ASST 1 cut(s) 306
SfcI CTRYAG 1 cut(s) 96
Sse9I AATT 5 cut(s) 51, 202, 223, 298, 318
SsiI CCGC 1 cut(s) 310
SspMI CTAG 2 cut(s) 71, 123
TaaI ACNGT 1 cut(s) 26
TaqI TCGA 1 cut(s) 345
TasI AATT 5 cut(s) 51, 202, 223, 298, 318
TfiI GAWTC 2 cut(s) 111, 119
Tru1I TTAA 1 cut(s) 222
Tru9I TTAA 1 cut(s) 222
TseI GCWGC 1 cut(s) 155
TspDTI ATGAA 1 cut(s) 17
VneI GTGCAC 1 cut(s) 20
XapI RAATTY 2 cut(s) 51, 202
XmiI GTMKAC 1 cut(s) 173
XspI CTAG 2 cut(s) 71, 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.