DNA binding
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002239.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00226340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 300 |
| AccI | GTMKAC | 1 cut(s) | 217 |
| AcsI | RAATTY | 1 cut(s) | 325 |
| AcuI | CTGAAG | 1 cut(s) | 357 |
| AgsI | TTSAA | 5 cut(s) | 16, 256, 314, 387, 401 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 367, 399 |
| AluBI | AGCT | 2 cut(s) | 124, 363 |
| AluI | AGCT | 2 cut(s) | 124, 363 |
| Alw21I | GWGCWC | 1 cut(s) | 370 |
| Alw26I | GTCTC | 1 cut(s) | 12 |
| ApoI | RAATTY | 1 cut(s) | 325 |
| BbsI | GAAGAC | 1 cut(s) | 189 |
| Bbv12I | GWGCWC | 1 cut(s) | 370 |
| BccI | CCATC | 2 cut(s) | 229, 277 |
| BclI | TGATCA | 1 cut(s) | 343 |
| BcoDI | GTCTC | 1 cut(s) | 12 |
| BfaI | CTAG | 2 cut(s) | 93, 264 |
| BmsI | GCATC | 2 cut(s) | 91, 256 |
| BpiI | GAAGAC | 1 cut(s) | 189 |
| BsaAI | YACGTR | 1 cut(s) | 200 |
| Bse1I | ACTGG | 1 cut(s) | 86 |
| BseGI | GGATG | 2 cut(s) | 82, 186 |
| BseNI | ACTGG | 1 cut(s) | 86 |
| BsiHKAI | GWGCWC | 1 cut(s) | 370 |
| BsmAI | GTCTC | 1 cut(s) | 12 |
| Bsp1286I | GDGCHC | 1 cut(s) | 370 |
| Bsp143I | GATC | 2 cut(s) | 306, 343 |
| BsrI | ACTGG | 1 cut(s) | 86 |
| BssMI | GATC | 2 cut(s) | 306, 343 |
| Bst4CI | ACNGT | 1 cut(s) | 280 |
| BstBAI | YACGTR | 1 cut(s) | 200 |
| BstF5I | GGATG | 2 cut(s) | 82, 186 |
| BstKTI | GATC | 2 cut(s) | 309, 346 |
| BstMAI | GTCTC | 1 cut(s) | 12 |
| BstMBI | GATC | 2 cut(s) | 306, 343 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 401 |
| BstV2I | GAAGAC | 1 cut(s) | 189 |
| BtsCI | GGATG | 2 cut(s) | 82, 186 |
| BtsIMutI | CAGTG | 1 cut(s) | 285 |
| CviJI | RGCY | 5 cut(s) | 124, 135, 155, 206, 363 |
| CviKI_1 | RGCY | 5 cut(s) | 124, 135, 155, 206, 363 |
| DpnI | GATC | 2 cut(s) | 308, 345 |
| DpnII | GATC | 2 cut(s) | 306, 343 |
| Eco57I | CTGAAG | 1 cut(s) | 357 |
| EcoRI | GAATTC | 1 cut(s) | 325 |
| FaiI | YATR | 7 cut(s) | 64, 72, 152, 192, 225, 300, 353 |
| FbaI | TGATCA | 1 cut(s) | 343 |
| FblI | GTMKAC | 1 cut(s) | 217 |
| FokI | GGATG | 2 cut(s) | 69, 173 |
| FspBI | CTAG | 2 cut(s) | 93, 264 |
| HinfI | GANTC | 2 cut(s) | 5, 287 |
| Hpy166II | GTNNAC | 1 cut(s) | 218 |
| Hpy188I | TCNGA | 1 cut(s) | 160 |
| Hpy188III | TCNNGA | 1 cut(s) | 347 |
| Hpy8I | GTNNAC | 1 cut(s) | 218 |
| HpyAV | CCTTC | 1 cut(s) | 308 |
| HpyCH4III | ACNGT | 1 cut(s) | 280 |
| HpyCH4IV | ACGT | 2 cut(s) | 199, 220 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 401 |
| HpySE526I | ACGT | 2 cut(s) | 199, 220 |
| Ksp22I | TGATCA | 1 cut(s) | 343 |
| Kzo9I | GATC | 2 cut(s) | 306, 343 |
| LpnPI | CCDG | 3 cut(s) | 99, 198, 332 |
| LweI | GCATC | 2 cut(s) | 91, 256 |
| MaeI | CTAG | 2 cut(s) | 93, 264 |
| MaeII | ACGT | 2 cut(s) | 199, 220 |
| MalI | GATC | 2 cut(s) | 308, 345 |
| MboI | GATC | 2 cut(s) | 306, 343 |
| MboII | GAAGA | 5 cut(s) | 158, 188, 194, 350, 375 |
| MhlI | GDGCHC | 1 cut(s) | 370 |
| MluCI | AATT | 3 cut(s) | 194, 256, 325 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MnlI | CCTC | 1 cut(s) | 385 |
| MseI | TTAA | 1 cut(s) | 38 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 401 |
| NdeII | GATC | 2 cut(s) | 306, 343 |
| PfeI | GAWTC | 1 cut(s) | 287 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| Ppu21I | YACGTR | 1 cut(s) | 200 |
| PsiI | TTATAA | 1 cut(s) | 300 |
| SaqAI | TTAA | 1 cut(s) | 38 |
| Sau3AI | GATC | 2 cut(s) | 306, 343 |
| SchI | GAGTC | 1 cut(s) | 14 |
| SduI | GDGCHC | 1 cut(s) | 370 |
| SetI | ASST | 5 cut(s) | 22, 126, 202, 223, 365 |
| SfaNI | GCATC | 2 cut(s) | 91, 256 |
| SgeI | CNNG | 9 cut(s) | 79, 98, 105, 179, 212, 225, 276, 359, 413 |
| Sse9I | AATT | 3 cut(s) | 194, 256, 325 |
| SspMI | CTAG | 2 cut(s) | 93, 264 |
| TaaI | ACNGT | 1 cut(s) | 280 |
| TaiI | ACGT | 2 cut(s) | 202, 223 |
| TasI | AATT | 3 cut(s) | 194, 256, 325 |
| TfiI | GAWTC | 1 cut(s) | 287 |
| Tru1I | TTAA | 1 cut(s) | 38 |
| Tru9I | TTAA | 1 cut(s) | 38 |
| TscAI | CASTG | 1 cut(s) | 285 |
| TspDTI | ATGAA | 3 cut(s) | 159, 195, 338 |
| TspRI | CASTG | 1 cut(s) | 285 |
| XapI | RAATTY | 1 cut(s) | 325 |
| XmiI | GTMKAC | 1 cut(s) | 217 |
| XspI | CTAG | 2 cut(s) | 93, 264 |