Proteasome
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000019.1_g000020 |
| rosa_roxburghii | Rroxscaffold_5G00359860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 17 |
| AciI | CCGC | 1 cut(s) | 101 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 205, 206 |
| AgsI | TTSAA | 4 cut(s) | 196, 213, 287, 296 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 193, 225 |
| AluBI | AGCT | 3 cut(s) | 26, 37, 166 |
| AluI | AGCT | 3 cut(s) | 26, 37, 166 |
| ApeKI | GCWGC | 1 cut(s) | 37 |
| AsuHPI | GGTGA | 4 cut(s) | 34, 90, 114, 238 |
| BbvI | GCAGC | 1 cut(s) | 24 |
| BccI | CCATC | 2 cut(s) | 54, 211 |
| BceAI | ACGGC | 1 cut(s) | 67 |
| BfaI | CTAG | 1 cut(s) | 137 |
| BisI | GCNGC | 1 cut(s) | 38 |
| BlsI | GCNGC | 1 cut(s) | 39 |
| BmsI | GCATC | 1 cut(s) | 253 |
| BpmI | CTGGAG | 1 cut(s) | 188 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 161, 191 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 205, 206 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 205, 206 |
| BseXI | GCAGC | 1 cut(s) | 24 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 205, 206 |
| BspACI | CCGC | 1 cut(s) | 101 |
| Bst6I | CTCTTC | 1 cut(s) | 132 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 88 |
| BstV1I | GCAGC | 1 cut(s) | 24 |
| CviJI | RGCY | 5 cut(s) | 5, 26, 37, 166, 281 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 26, 37, 166, 281 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 17 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 17 |
| Eam1104I | CTCTTC | 1 cut(s) | 132 |
| EarI | CTCTTC | 1 cut(s) | 132 |
| FaiI | YATR | 4 cut(s) | 23, 180, 260, 300 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 61, 93 |
| Fnu4HI | GCNGC | 1 cut(s) | 38 |
| Fsp4HI | GCNGC | 1 cut(s) | 38 |
| FspBI | CTAG | 1 cut(s) | 137 |
| GluI | GCNGC | 1 cut(s) | 38 |
| GsuI | CTGGAG | 1 cut(s) | 188 |
| HinfI | GANTC | 1 cut(s) | 307 |
| HphI | GGTGA | 4 cut(s) | 34, 90, 114, 238 |
| Hpy166II | GTNNAC | 1 cut(s) | 87 |
| Hpy188I | TCNGA | 1 cut(s) | 108 |
| Hpy8I | GTNNAC | 1 cut(s) | 87 |
| HpyAV | CCTTC | 1 cut(s) | 105 |
| HpyCH4V | TGCA | 1 cut(s) | 190 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 88 |
| LpnPI | CCDG | 1 cut(s) | 152 |
| Lsp1109I | GCAGC | 1 cut(s) | 24 |
| LweI | GCATC | 1 cut(s) | 253 |
| MaeI | CTAG | 1 cut(s) | 137 |
| MaeIII | GTNAC | 1 cut(s) | 116 |
| MboII | GAAGA | 1 cut(s) | 119 |
| MluCI | AATT | 1 cut(s) | 325 |
| MmeI | TCCRAC | 1 cut(s) | 131 |
| MnlI | CCTC | 5 cut(s) | 114, 135, 141, 145, 268 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 88 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 80 |
| PfeI | GAWTC | 1 cut(s) | 307 |
| PkrI | GCNGC | 1 cut(s) | 39 |
| SatI | GCNGC | 1 cut(s) | 38 |
| SetI | ASST | 5 cut(s) | 28, 39, 74, 127, 168 |
| SfaNI | GCATC | 1 cut(s) | 253 |
| Sse9I | AATT | 1 cut(s) | 325 |
| SsiI | CCGC | 1 cut(s) | 101 |
| SspMI | CTAG | 1 cut(s) | 137 |
| TaqI | TCGA | 1 cut(s) | 33 |
| TaqII | GACCGA | 1 cut(s) | 7 |
| TasI | AATT | 1 cut(s) | 325 |
| TfiI | GAWTC | 1 cut(s) | 307 |
| TseI | GCWGC | 1 cut(s) | 37 |
| TspDTI | ATGAA | 1 cut(s) | 261 |
| XspI | CTAG | 1 cut(s) | 137 |