Pentatricopeptide repeat-containing protein At1g43980
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0039841 |
| rosa_roxburghii | Rroxscaffold_7G00169150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 108 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 163 |
| AgsI | TTSAA | 1 cut(s) | 152 |
| Alw21I | GWGCWC | 1 cut(s) | 224 |
| Alw44I | GTGCAC | 1 cut(s) | 220 |
| AoxI | GGCC | 1 cut(s) | 80 |
| ApaLI | GTGCAC | 1 cut(s) | 220 |
| ApeKI | GCWGC | 1 cut(s) | 46 |
| BaeGI | GKGCMC | 1 cut(s) | 224 |
| Bbv12I | GWGCWC | 1 cut(s) | 224 |
| BbvI | GCAGC | 1 cut(s) | 33 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 173, 207 |
| BisI | GCNGC | 1 cut(s) | 47 |
| BlsI | GCNGC | 1 cut(s) | 48 |
| BmsI | GCATC | 1 cut(s) | 181 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 163 |
| Bse1I | ACTGG | 1 cut(s) | 134 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BseMII | CTCAG | 2 cut(s) | 91, 101 |
| BseNI | ACTGG | 1 cut(s) | 134 |
| BseSI | GKGCMC | 1 cut(s) | 224 |
| BseXI | GCAGC | 1 cut(s) | 33 |
| BshFI | GGCC | 1 cut(s) | 82 |
| BsiHKAI | GWGCWC | 1 cut(s) | 224 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BsnI | GGCC | 1 cut(s) | 82 |
| Bsp1286I | GDGCHC | 1 cut(s) | 224 |
| BspANI | GGCC | 1 cut(s) | 82 |
| BspCNI | CTCAG | 2 cut(s) | 90, 102 |
| BsrI | ACTGG | 1 cut(s) | 134 |
| Bst4CI | ACNGT | 1 cut(s) | 43 |
| BstDEI | CTNAG | 4 cut(s) | 77, 87, 98, 110 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 55 |
| BstSLI | GKGCMC | 1 cut(s) | 224 |
| BstV1I | GCAGC | 1 cut(s) | 33 |
| BsuRI | GGCC | 1 cut(s) | 82 |
| BtsI | GCAGTG | 1 cut(s) | 109 |
| BtsIMutI | CAGTG | 1 cut(s) | 109 |
| Csp6I | GTAC | 1 cut(s) | 107 |
| CviJI | RGCY | 2 cut(s) | 82, 180 |
| CviKI_1 | RGCY | 2 cut(s) | 82, 180 |
| CviQI | GTAC | 1 cut(s) | 107 |
| DdeI | CTNAG | 4 cut(s) | 77, 87, 98, 110 |
| DraI | TTTAAA | 1 cut(s) | 171 |
| FaiI | YATR | 3 cut(s) | 15, 24, 119 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 164, 196 |
| Fnu4HI | GCNGC | 1 cut(s) | 47 |
| Fsp4HI | GCNGC | 1 cut(s) | 47 |
| GluI | GCNGC | 1 cut(s) | 47 |
| HaeIII | GGCC | 1 cut(s) | 82 |
| HinfI | GANTC | 1 cut(s) | 73 |
| Hpy166II | GTNNAC | 5 cut(s) | 93, 107, 123, 209, 222 |
| Hpy8I | GTNNAC | 5 cut(s) | 93, 107, 123, 209, 222 |
| HpyCH4III | ACNGT | 1 cut(s) | 43 |
| HpyCH4V | TGCA | 2 cut(s) | 17, 222 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 55 |
| HpyF3I | CTNAG | 4 cut(s) | 77, 87, 98, 110 |
| LpnPI | CCDG | 3 cut(s) | 64, 128, 147 |
| Lsp1109I | GCAGC | 1 cut(s) | 33 |
| LweI | GCATC | 1 cut(s) | 181 |
| MhlI | GDGCHC | 1 cut(s) | 224 |
| MluCI | AATT | 1 cut(s) | 25 |
| MseI | TTAA | 1 cut(s) | 170 |
| MslI | CAYNNNNRTG | 1 cut(s) | 27 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 55 |
| PfeI | GAWTC | 1 cut(s) | 73 |
| PkrI | GCNGC | 1 cut(s) | 48 |
| RsaI | GTAC | 1 cut(s) | 108 |
| RsaNI | GTAC | 1 cut(s) | 107 |
| RseI | CAYNNNNRTG | 1 cut(s) | 27 |
| SaqAI | TTAA | 1 cut(s) | 170 |
| SatI | GCNGC | 1 cut(s) | 47 |
| SduI | GDGCHC | 1 cut(s) | 224 |
| SetI | ASST | 1 cut(s) | 65 |
| SfaNI | GCATC | 1 cut(s) | 181 |
| SgeI | CNNG | 6 cut(s) | 76, 91, 146, 155, 174, 196 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 27 |
| Sse9I | AATT | 1 cut(s) | 25 |
| TaaI | ACNGT | 1 cut(s) | 43 |
| TaqI | TCGA | 1 cut(s) | 183 |
| TasI | AATT | 1 cut(s) | 25 |
| TatI | WGTACW | 1 cut(s) | 106 |
| TfiI | GAWTC | 1 cut(s) | 73 |
| Tru1I | TTAA | 1 cut(s) | 170 |
| Tru9I | TTAA | 1 cut(s) | 170 |
| TscAI | CASTG | 1 cut(s) | 109 |
| TseI | GCWGC | 1 cut(s) | 46 |
| TspRI | CASTG | 1 cut(s) | 109 |
| VneI | GTGCAC | 1 cut(s) | 220 |