Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003351

Physical Location & Seq

Genomic Coordinates Reverse (-)

30162544 .. 30166190

Gene Structure 3647 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0279200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2628 bp

ATGTTTAAAATTCTTTTTTGGAATGCTAGAGGTGCTGGAAGTGAGAATTTTAGGTCTGCCATCTCAGACTTAGTTAGACTTCACTCTATTGATATTTTGGCTATTTGTGAGCCTCGTGTTCAATTTGCTAGAGCTAGTACTACTCTCAATAATCTTGGTTTTTCTGACTCAAGAGTTATGGAAGCTGAGGGTTTTTCTGGTGGTCTTTGGTTGCTGTGGAATAAAAACAAGGTTAAAGTGGACTTCATCGATGAAAACTTTCGGTCTATTTCTATCAAGATCACCCTTACTGGCAAACCTGCCTGGATGCTCACTGTGGTTTATGCTAGCCCAAATCATACTTCTCGGGCCTCCCTTTGGTCTTACTTTGATAACCTTGCTGCAAATAACAATCTACCTTGGATGCTAATTGGTGATTTCAATGAGTTGGTTTCTAGTGTTGATAAGAATGGTGGATCATTTAATGGAAAGTTTGGTGGTCTCAGAAATTGGATCAATAGAAATGCCATGATTGACAAGGGATTCCAAGGCTCCTGTTTCACTTGGAGTAATAACAGGGTGAAGGAAAGATTGGATAGGGGTTTCTGCAATTGTGCTTGGAGAGCCTTATTTGATGAAGCTTTTACCGGCACCTCCCCAAAACCAGGTCTGATCACTGCCCCATTGTTATGCAGAAAAGCTCCAACAATTCTGTTAATAGAAGAGCCACTCCGTTTCGTTTCCAGGCCATGTGGTTCTCACATGCTAAGTATGCTGATTTTGTTTCCTCCACTTGGAAATCTTTATCTGGCAATTTTCCTACTAGAGTCAAAAATCTTTCCATTGCTTTTGCTAAATGGAATAAAGAGAGGAAAGGGCGTCGCAGAAATGACAGGGGTTGATGAAAATCTGGTGGAGAAAATCCTGTCAACTCTGCCTCCCAAGGCTCTGATGCGATTCAAATGCGCCTCTAAAGTGTGGTATGCGCTGATCAACGATCCCAGGTTCGTAGCTAAGCACCTCTTCAATTACAATTACAATTCCAATTCCAAGCTTCTGCTCTTTATGAAGAGGCGTTTAGTCTCCGAGGACATCAAGGACACTGCTAATGAGATTACAGAAGAAGTAGAAGGACAGCTAGAGTTTTCGTTGCTTAATTTATGCAATAATGATGATGATATTGATAATGGTGAGGACAGCATTATTATCTCTAGTGTCGAGGACATCAAGATTCCTCTTTGTACGAGTCTAAAGACTAGAGGCGAAGCAGTTCATATTGTAGGGCATTGCAATGGAATCATCTGTCTAGTTCTAGGAGTTGTAGCTAATTCTTTTCAGCTGCTTTTATGGAACCCAGCAATTCAGGAATTCAAGCTTCTTCCCCCCCGTCCATACCTTCAAGATGTTGATTGGGAAAGATCTCTGTGGTTCAAGTATGTTCACGGGTTTGGATATGATCCTAAATTGAACGAATATAAAGTTGTTAGCATTGGACTAGTTTATCCAGATGATTTTAGGGATGATGGATATGTTATTCATCATCCTCCAAAACCAGCAATATACACTTTGAGTACTGATTCTTGGAAAGAGATCAAAACCAATGCTTTCGAAACAGAAACCACTCTCCTTTTACCCGAAAATTTCCAGATTCAATTCAAGCAAATGTTTTATTGGTTAGGATATGAGCAACATAAGGAACTGGATTTGTTTGATATAGACGAGGACTCCATTGGGCCGGTCATCATTTTGTTGGATATTGAGAATGAGGTATTTCATGATATCATGTTACCTGATAGTTTATATCCTCGCTATGTCATGTTCAATCCCAGTCTCTATATTAATGGTATGCAACTTCGAGTGTGGAACGAATCCCCTGCTCTTTTTGTATTGGTTGATAAACTTCAAGGTATTAAACCTGAAGAAGATGAATCTTTTGTAATATGGGTGCTGGATGAACTTGGTGGTGCTTGGACAAAACACATGACTCTTGAACCCACAGAGAAGCCATTGTCACTTTTGAATACCAATAAGATAGTTATAAATGATTTCATGGGACTTGTACTCTCCTATGAACTTCGTAGCAAAAGGCTTAAAGATATTCTGATTCAAAACACGCCTTATTCTCATATATATGTCCAGTTAGATGACATTGCAGCTGTTGTCTATGTGAAAAGTATAGTTTCAGTATTGGGAGCCGAGAAGCTCCAAAGCAGAGAGAATTCCAACGTGGCGAACTTTTCTCTACTCACGCACTTTCCATTCAGTCCTTCAATAGTGGACAGGGAATCGACCTCATATTCAATATGGGCCATCCCATCGGATGATGTGTCTCTTAGGATCAAGAAAGTGATGGAAAGTCTCAGGGCCGAGTTCGGTGGGCCGGAGATCGAACCACATATCCCTATTGTGGTATCTATTCGTATGACGTATGAAGATGTGCTCAACAAATTTAGATCTCTCCGTTCTAAAAATCTCCATGCATATCAAGCAAAAGTTGATCTAGTGGTTACTAGAAATTTTTATCACCAATGTGTTTCTCTACTCATTGATAAATCCGAACAGTTAATATGTACAACTGAGATATGCAATGACCATTTCGGTTTACCTTCGCGTAAGTTCCCTTCATTGTTGAACTGCTTTTTTCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Transferase

Protein Analysis

875

Amino Acids

99.9

Weight (kDa)

5.85

Isoelectric Point (pI)

36.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos	PF03372	6 - 193	8e-12	Endonuclease/Exonuclease/phosphatase family
FBA_1	PF07734	414 - 721	3.9e-15	F-box associated beta propeller domain
FBA_3	PF08268	415 - 659	5.8e-07	F-box associated beta propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003351)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32910 AT1G78990
fragaria_vesca	FvH4_6g36370 FvH4_6g36390 FvH4_6g36390 FvH4_6g36390 FvH4_6g36410
malus_domestica	MD04G1032000.v1.1 MD09G1169600.v1.1 MD17G1157600.v1.1
prunus_persica	Prupe.3G027700_v2.0.a1 Prupe.3G027900_v2.0.a1 Prupe.3G027900_v2.0.a1
pyrus_communis	pycom09g08700 pycom17g15080 pycom17g19380
rosa_chinensis	RchiOBHm_Chr2g0128251 RchiOBHm_Chr2g0148381
rosa_laevigata	RLG00000020344
rosa_multiflora	Rmu_sc0000837.1_g000016 Rmu_sc0003465.1_g000009 Rmu_sc0011136.1_g000001
rosa_roxburghii	Rroxscaffold_2G00098800
rosa_rugosa	Rorug02G0279200 Rorug02G0406200
rosa_samantha	Rh2AG331600 Rh2AG465200 Rh2BG339900 Rh2BG478000 Rh2CG317300 Rh2CG318900 Rh2CG451600 Rh2DG356800 Rh2DG486800
rosa_wichuraiana	Rw2G026830 Rw2G037920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2018
Acc36I	ACCTGC	1 cut(s)	307
AccB1I	GGYRCC	1 cut(s)	629
AccII	CGCG	1 cut(s)	2590
AclWI	GGATC	5 cut(s)	463, 500, 971, 1430, 2324
AcsI	RAATTY	7 cut(s)	9, 46, 1346, 1618, 2197, 2426, 2494
AcuI	CTGAAG	1 cut(s)	1917
AcyI	GRCGYC	1 cut(s)	858
AfaI	GTAC	5 cut(s)	139, 1222, 1552, 2040, 2551
AfiI	CCNNNNNNNGG	4 cut(s)	357, 644, 773, 2386
AhlI	ACTAGT	1 cut(s)	1474
AjnI	CCWGG	4 cut(s)	302, 643, 722, 980
AjuI	GAANNNNNNNTTGG	4 cut(s)	325, 357, 554, 586
AleI	CACNNNNGTG	1 cut(s)	2508
AloI	GAACNNNNNNTCC	2 cut(s)	2361, 2393
Alw21I	GWGCWC	1 cut(s)	2421
Alw26I	GTCTC	5 cut(s)	485, 1066, 1814, 2313, 2342
AlwI	GGATC	5 cut(s)	463, 500, 971, 1430, 2324
Ama87I	CYCGRG	1 cut(s)	345
AoxI	GGCC	6 cut(s)	348, 725, 1712, 2286, 2343, 2357
ApeKI	GCWGC	3 cut(s)	380, 1318, 2132
ApoI	RAATTY	7 cut(s)	9, 46, 1346, 1618, 2197, 2426, 2494
AseI	ATTAAT	1 cut(s)	1818
Asp700I	GAANNNNTTC	2 cut(s)	258, 1248
AspLEI	GCGC	2 cut(s)	947, 967
AspS9I	GGNCC	5 cut(s)	348, 1712, 2286, 2343, 2357
AsuHPI	GGTGA	5 cut(s)	274, 425, 571, 1181, 2495
AsuII	TTCGAA	1 cut(s)	1587
AsuNHI	GCTAGC	1 cut(s)	326
AvaI	CYCGRG	1 cut(s)	345
BanI	GGYRCC	1 cut(s)	629
BarI	GAAGNNNNNNTAC	2 cut(s)	2584, 2616
BauI	CACGAG	1 cut(s)	114
Bbv12I	GWGCWC	1 cut(s)	2421
BbvCI	CCTCAGC	1 cut(s)	186
BbvI	GCAGC	3 cut(s)	367, 1305, 2144
BccI	CCATC	5 cut(s)	68, 1496, 2297, 2302, 2323
BcgI	CGANNNNNNTGC	4 cut(s)	924, 958, 1835, 1869
BciT130I	CCWGG	4 cut(s)	304, 645, 724, 982
BclI	TGATCA	2 cut(s)	651, 969
BcoDI	GTCTC	5 cut(s)	485, 1066, 1814, 2313, 2342
BcuI	ACTAGT	1 cut(s)	1474
BfuAI	ACCTGC	1 cut(s)	307
BglII	AGATCT	2 cut(s)	1397, 2432
BisI	GCNGC	3 cut(s)	381, 1319, 2133
BlpI	GCTNAGC	1 cut(s)	993
BlsI	GCNGC	3 cut(s)	382, 1320, 2134
BmcAI	AGTACT	2 cut(s)	139, 1552
Bme1390I	CCNGG	4 cut(s)	304, 645, 724, 982
BmeT110I	CYCGRG	1 cut(s)	345
BmgT120I	GGNCC	5 cut(s)	348, 1712, 2286, 2343, 2357
BmiI	GGNNCC	4 cut(s)	532, 631, 1331, 2173
BmrFI	CCNGG	4 cut(s)	304, 645, 724, 982
BmrI	ACTGGG	1 cut(s)	1800
BmsI	GCATC	3 cut(s)	297, 393, 921
BmtI	GCTAGC	1 cut(s)	330
BmuI	ACTGGG	1 cut(s)	1800
Bpu10I	CCTNAGC	1 cut(s)	186
Bpu1102I	GCTNAGC	1 cut(s)	993
Bpu14I	TTCGAA	1 cut(s)	1587
BpuEI	CTTGAG	1 cut(s)	154
Bsa29I	ATCGAT	1 cut(s)	249
BsaBI	GATNNNNATC	1 cut(s)	885
BsaHI	GRCGYC	1 cut(s)	858
BsaI	GGTCTC	1 cut(s)	485
BsaJI	CCNNGG	5 cut(s)	398, 526, 921, 980, 1065
BsaXI	ACNNNNNCTCC	4 cut(s)	901, 931, 1688, 1718
Bsc4I	CCNNNNNNNGG	4 cut(s)	357, 644, 773, 2386
Bse118I	RCCGGY	2 cut(s)	626, 1714
Bse1I	ACTGG	4 cut(s)	295, 1683, 1806, 2116
Bse3DI	GCAATG	5 cut(s)	821, 1264, 1276, 2127, 2572
Bse8I	GATNNNNATC	1 cut(s)	885
BseBI	CCWGG	4 cut(s)	304, 645, 724, 982
BseCI	ATCGAT	1 cut(s)	249
BseDI	CCNNGG	5 cut(s)	398, 526, 921, 980, 1065
BseGI	GGATG	7 cut(s)	312, 408, 1504, 1519, 1936, 2289, 2305
BseJI	GATNNNNATC	1 cut(s)	885
BseLI	CCNNNNNNNGG	4 cut(s)	357, 644, 773, 2386
BseMI	GCAATG	5 cut(s)	821, 1264, 1276, 2127, 2572
BseMII	CTCAG	5 cut(s)	78, 177, 496, 2353, 2547
BseNI	ACTGG	4 cut(s)	295, 1683, 1806, 2116
BseXI	GCAGC	3 cut(s)	367, 1305, 2144
BseYI	CCCAGC	1 cut(s)	1333
Bsh1236I	CGCG	1 cut(s)	2590
BshFI	GGCC	6 cut(s)	350, 727, 1714, 2288, 2345, 2359
BshNI	GGYRCC	1 cut(s)	629
BshVI	ATCGAT	1 cut(s)	249
BsiHKAI	GWGCWC	1 cut(s)	2421
BsiHKCI	CYCGRG	1 cut(s)	345
BsiSI	CCGG	3 cut(s)	627, 1715, 2360
BslFI	GGGAC	1 cut(s)	2046
BslI	CCNNNNNNNGG	4 cut(s)	357, 644, 773, 2386
BsmAI	GTCTC	5 cut(s)	485, 1066, 1814, 2313, 2342
BsmFI	GGGAC	1 cut(s)	2046
BsmI	GAATGC	1 cut(s)	28
BsnI	GGCC	6 cut(s)	350, 727, 1714, 2288, 2345, 2359
Bso31I	GGTCTC	1 cut(s)	485
BsoBI	CYCGRG	1 cut(s)	345
Bsp119I	TTCGAA	1 cut(s)	1587
Bsp1286I	GDGCHC	1 cut(s)	2421
Bsp1407I	TGTACA	1 cut(s)	2549
Bsp1720I	GCTNAGC	1 cut(s)	993
BspANI	GGCC	6 cut(s)	350, 727, 1714, 2288, 2345, 2359
BspCNI	CTCAG	5 cut(s)	77, 178, 495, 2352, 2548
BspDI	ATCGAT	1 cut(s)	249
BspFNI	CGCG	1 cut(s)	2590
BspHI	TCATGA	1 cut(s)	1753
BspLI	GGNNCC	4 cut(s)	532, 631, 1331, 2173
BspMI	ACCTGC	1 cut(s)	307
BspOI	GCTAGC	1 cut(s)	330
BspPI	GGATC	5 cut(s)	463, 500, 971, 1430, 2324
BspQI	GCTCTTC	1 cut(s)	696
BspT104I	TTCGAA	1 cut(s)	1587
BspT107I	GGYRCC	1 cut(s)	629
BspTNI	GGTCTC	1 cut(s)	485
BsrDI	GCAATG	5 cut(s)	821, 1264, 1276, 2127, 2572
BsrFI	RCCGGY	2 cut(s)	626, 1714
BsrGI	TGTACA	1 cut(s)	2549
BsrI	ACTGG	4 cut(s)	295, 1683, 1806, 2116
BssAI	RCCGGY	2 cut(s)	626, 1714
BssECI	CCNNGG	5 cut(s)	398, 526, 921, 980, 1065
BssNI	GRCGYC	1 cut(s)	858
BssSI	CACGAG	1 cut(s)	114
BssT1I	CCWWGG	3 cut(s)	398, 526, 921
Bst2BI	CACGAG	1 cut(s)	114
Bst2UI	CCWGG	4 cut(s)	304, 645, 724, 982
Bst4CI	ACNGT	2 cut(s)	316, 2541
Bst6I	CTCTTC	3 cut(s)	696, 1007, 1043
BstACI	GRCGYC	1 cut(s)	858
BstAUI	TGTACA	1 cut(s)	2549
BstBI	TTCGAA	1 cut(s)	1587
BstC8I	GCNNGC	1 cut(s)	328
BstDEI	CTNAG	9 cut(s)	64, 70, 186, 482, 746, 993, 2312, 2339, 2556
BstF5I	GGATG	7 cut(s)	312, 408, 1504, 1519, 1936, 2289, 2305
BstFNI	CGCG	1 cut(s)	2590
BstHHI	GCGC	2 cut(s)	947, 967
BstMAI	GTCTC	5 cut(s)	485, 1066, 1814, 2313, 2342
BstMWI	GCNNNNNNNGC	4 cut(s)	32, 602, 751, 2465
BstNI	CCWGG	4 cut(s)	304, 645, 724, 982
BstNSI	RCATGY	1 cut(s)	745
BstSCI	CCNGG	4 cut(s)	302, 643, 722, 980
BstUI	CGCG	1 cut(s)	2590
BstV1I	GCAGC	3 cut(s)	367, 1305, 2144
BstX2I	RGATCY	2 cut(s)	1397, 2432
BstYI	RGATCY	2 cut(s)	1397, 2432
Bsu15I	ATCGAT	1 cut(s)	249
BsuRI	GGCC	6 cut(s)	350, 727, 1714, 2288, 2345, 2359
BsuTUI	ATCGAT	1 cut(s)	249
BtsCI	GGATG	7 cut(s)	312, 408, 1504, 1519, 1936, 2289, 2305
BtsI	GCAGTG	2 cut(s)	654, 1080
BtsIMutI	CAGTG	3 cut(s)	312, 654, 1080
BveI	ACCTGC	1 cut(s)	307
Cac8I	GCNNGC	1 cut(s)	328
CciI	TCATGA	1 cut(s)	1753
CfoI	GCGC	2 cut(s)	947, 967
Cfr10I	RCCGGY	2 cut(s)	626, 1714
Cfr13I	GGNCC	5 cut(s)	348, 1712, 2286, 2343, 2357
ClaI	ATCGAT	1 cut(s)	249
CseI	GACGC	1 cut(s)	847
CsiI	ACCWGGT	1 cut(s)	643
Csp6I	GTAC	5 cut(s)	138, 1221, 1551, 2039, 2550
CviAII	CATG	9 cut(s)	508, 729, 742, 1754, 1762, 1795, 1960, 2029, 2456
CviQI	GTAC	5 cut(s)	138, 1221, 1551, 2039, 2550
DdeI	CTNAG	9 cut(s)	64, 70, 186, 482, 746, 993, 2312, 2339, 2556
DraI	TTTAAA	1 cut(s)	7
Eam1104I	CTCTTC	3 cut(s)	696, 1007, 1043
EarI	CTCTTC	3 cut(s)	696, 1007, 1043
Eco130I	CCWWGG	3 cut(s)	398, 526, 921
Eco31I	GGTCTC	1 cut(s)	485
Eco32I	GATATC	1 cut(s)	1759
Eco57I	CTGAAG	1 cut(s)	1917
Eco88I	CYCGRG	1 cut(s)	345
EcoRI	GAATTC	2 cut(s)	1346, 2197
EcoRII	CCWGG	4 cut(s)	302, 643, 722, 980
EcoRV	GATATC	1 cut(s)	1759
EcoT14I	CCWWGG	3 cut(s)	398, 526, 921
EcoT22I	ATGCAT	1 cut(s)	2461
ErhI	CCWWGG	3 cut(s)	398, 526, 921
FaeI	CATG	9 cut(s)	511, 732, 745, 1757, 1765, 1798, 1963, 2032, 2459
FalI	AAGNNNNNCTT	2 cut(s)	986, 1018
FaqI	GGGAC	1 cut(s)	2046
FatI	CATG	9 cut(s)	507, 728, 741, 1753, 1761, 1794, 1959, 2028, 2455
FbaI	TGATCA	2 cut(s)	651, 969
Fnu4HI	GCNGC	3 cut(s)	381, 1319, 2133
FokI	GGATG	7 cut(s)	319, 415, 1506, 1511, 1943, 2276, 2312
Fsp4HI	GCNGC	3 cut(s)	381, 1319, 2133
GlaI	GCGC	2 cut(s)	946, 966
GluI	GCNGC	3 cut(s)	381, 1319, 2133
GsaI	CCCAGC	1 cut(s)	1337
HaeIII	GGCC	6 cut(s)	350, 727, 1714, 2288, 2345, 2359
HapII	CCGG	3 cut(s)	627, 1715, 2360
HgaI	GACGC	1 cut(s)	847
HhaI	GCGC	2 cut(s)	947, 967
Hin1I	GRCGYC	1 cut(s)	858
Hin1II	CATG	9 cut(s)	511, 732, 745, 1757, 1765, 1798, 1963, 2032, 2459
Hin6I	GCGC	2 cut(s)	945, 965
HinP1I	GCGC	2 cut(s)	945, 965
HincII	GTYRAC	1 cut(s)	909
HindII	GTYRAC	1 cut(s)	909
HindIII	AAGCTT	3 cut(s)	618, 1031, 1352
HpaII	CCGG	3 cut(s)	627, 1715, 2360
HphI	GGTGA	5 cut(s)	274, 425, 571, 1181, 2495
Hpy166II	GTNNAC	5 cut(s)	241, 909, 1420, 2257, 2582
Hpy188I	TCNGA	9 cut(s)	67, 166, 485, 651, 930, 1066, 2082, 2299, 2536
Hpy8I	GTNNAC	5 cut(s)	241, 909, 1420, 2257, 2582
Hpy99I	CGWCG	1 cut(s)	863
HpyAV	CCTTC	6 cut(s)	556, 1103, 1385, 2256, 2595, 2610
HpyCH4III	ACNGT	2 cut(s)	316, 2541
HpyCH4IV	ACGT	2 cut(s)	2205, 2405
HpyCH4V	TGCA	9 cut(s)	383, 588, 672, 1143, 1269, 1828, 2132, 2459, 2565
HpyF10VI	GCNNNNNNNGC	4 cut(s)	32, 602, 751, 2465
HpyF3I	CTNAG	9 cut(s)	64, 70, 186, 482, 746, 993, 2312, 2339, 2556
HpySE526I	ACGT	2 cut(s)	2205, 2405
Hsp92I	GRCGYC	1 cut(s)	858
Hsp92II	CATG	9 cut(s)	511, 732, 745, 1757, 1765, 1798, 1963, 2032, 2459
HspAI	GCGC	2 cut(s)	945, 965
Ksp22I	TGATCA	2 cut(s)	651, 969
LguI	GCTCTTC	1 cut(s)	696
LmnI	GCTCC	4 cut(s)	536, 685, 2171, 2187
Lsp1109I	GCAGC	3 cut(s)	367, 1305, 2144
LweI	GCATC	3 cut(s)	297, 393, 921
MabI	ACCWGGT	1 cut(s)	643
MaeII	ACGT	2 cut(s)	2205, 2405
MaeIII	GTNAC	3 cut(s)	1764, 1989, 2485
MboII	GAAGA	8 cut(s)	713, 994, 1060, 1112, 1349, 1910, 1913, 2423
MfeI	CAATTG	1 cut(s)	589
MflI	RGATCY	2 cut(s)	1397, 2432
MhlI	GDGCHC	1 cut(s)	2421
MlyI	GAGTC	5 cut(s)	161, 815, 1234, 1697, 1957
MmeI	TCCRAC	3 cut(s)	707, 1710, 2226
Mph1103I	ATGCAT	1 cut(s)	2461
MroXI	GAANNNNTTC	2 cut(s)	258, 1248
MseI	TTAA	9 cut(s)	6, 234, 462, 695, 1134, 1818, 1890, 2070, 2543
MslI	CAYNNNNRTG	4 cut(s)	667, 1269, 2109, 2508
MspA1I	CMGCKG	2 cut(s)	1318, 2135
MspI	CCGG	3 cut(s)	627, 1715, 2360
MspR9I	CCNGG	4 cut(s)	304, 645, 724, 982
MunI	CAATTG	1 cut(s)	589
Mva1269I	GAATGC	1 cut(s)	28
MvaI	CCWGG	4 cut(s)	304, 645, 724, 982
MvnI	CGCG	1 cut(s)	2590
MwoI	GCNNNNNNNGC	4 cut(s)	32, 602, 751, 2465
NheI	GCTAGC	1 cut(s)	326
NlaIII	CATG	9 cut(s)	511, 732, 745, 1757, 1765, 1798, 1963, 2032, 2459
NlaIV	GGNNCC	4 cut(s)	532, 631, 1331, 2173
NmeAIII	GCCGAG	2 cut(s)	2200, 2371
NmuCI	GTSAC	1 cut(s)	1989
NsiI	ATGCAT	1 cut(s)	2461
NspI	RCATGY	1 cut(s)	745
NspV	TTCGAA	1 cut(s)	1587
OliI	CACNNNNGTG	1 cut(s)	2508
PagI	TCATGA	1 cut(s)	1753
PciSI	GCTCTTC	1 cut(s)	696
PctI	GAATGC	1 cut(s)	28
PdmI	GAANNNNTTC	2 cut(s)	258, 1248
PkrI	GCNGC	3 cut(s)	382, 1320, 2134
PleI	GAGTC	5 cut(s)	161, 814, 1233, 1697, 1957
PpsI	GAGTC	5 cut(s)	161, 814, 1233, 1697, 1957
PshBI	ATTAAT	1 cut(s)	1818
PsiI	TTATAA	1 cut(s)	2018
Psp6I	CCWGG	4 cut(s)	302, 643, 722, 980
PspFI	CCCAGC	1 cut(s)	1333
PspGI	CCWGG	4 cut(s)	302, 643, 722, 980
PspN4I	GGNNCC	4 cut(s)	532, 631, 1331, 2173
PspPI	GGNCC	5 cut(s)	348, 1712, 2286, 2343, 2357
PsuI	RGATCY	2 cut(s)	1397, 2432
PvuII	CAGCTG	2 cut(s)	1318, 2135
RsaI	GTAC	5 cut(s)	139, 1222, 1552, 2040, 2551
RsaNI	GTAC	5 cut(s)	138, 1221, 1551, 2039, 2550
RseI	CAYNNNNRTG	4 cut(s)	667, 1269, 2109, 2508
SapI	GCTCTTC	1 cut(s)	696
SaqAI	TTAA	9 cut(s)	6, 234, 462, 695, 1134, 1818, 1890, 2070, 2543
SatI	GCNGC	3 cut(s)	381, 1319, 2133
Sau96I	GGNCC	5 cut(s)	348, 1712, 2286, 2343, 2357
ScaI	AGTACT	2 cut(s)	139, 1552
SchI	GAGTC	5 cut(s)	161, 815, 1234, 1697, 1957
ScrFI	CCNGG	4 cut(s)	304, 645, 724, 982
SduI	GDGCHC	1 cut(s)	2421
SexAI	ACCWGGT	1 cut(s)	643
SfaNI	GCATC	3 cut(s)	297, 393, 921
SfuI	TTCGAA	1 cut(s)	1587
SmiMI	CAYNNNNRTG	4 cut(s)	667, 1269, 2109, 2508
SmlI	CTYRAG	1 cut(s)	169
SmoI	CTYRAG	1 cut(s)	169
SpeI	ACTAGT	1 cut(s)	1474
StyD4I	CCNGG	4 cut(s)	302, 643, 722, 980
StyI	CCWWGG	3 cut(s)	398, 526, 921
TaaI	ACNGT	2 cut(s)	316, 2541
TaiI	ACGT	2 cut(s)	2208, 2408
TaqI	TCGA	6 cut(s)	249, 1197, 1587, 1834, 2267, 2367
TaqII	GACCGA	1 cut(s)	252
TatI	WGTACW	4 cut(s)	137, 1550, 2038, 2549
Tru1I	TTAA	9 cut(s)	6, 234, 462, 695, 1134, 1818, 1890, 2070, 2543
Tru9I	TTAA	9 cut(s)	6, 234, 462, 695, 1134, 1818, 1890, 2070, 2543
TscAI	CASTG	3 cut(s)	319, 661, 1087
TseFI	GTSAC	1 cut(s)	1989
TseI	GCWGC	3 cut(s)	380, 1318, 2132
Tsp45I	GTSAC	1 cut(s)	1989
TspGWI	ACGGA	2 cut(s)	701, 2429
TspRI	CASTG	3 cut(s)	319, 661, 1087
VspI	ATTAAT	1 cut(s)	1818
XapI	RAATTY	7 cut(s)	9, 46, 1346, 1618, 2197, 2426, 2494
XceI	RCATGY	1 cut(s)	745
XmnI	GAANNNNTTC	2 cut(s)	258, 1248
ZrmI	AGTACT	2 cut(s)	139, 1552
Zsp2I	ATGCAT	1 cut(s)	2461

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.