Rorug04G0067500

PHF5-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0030101
Physical Location & Seq
Reverse (-)
10482886 .. 10486302
3417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0067500.1

Sequence Viewer

Length: 2001 bp
ATGACTCCAAACCTCGAAAAATCATCTCGGATCTCGGGTCTCTTAAGCTCCGATTACAGCTTCAAGCTCTTCAGCAAATCGGACCAAATTTCTTCTTCTTCTTCTTCAAAGCCCCTAAATTTCGATCTCGGATCTACTGGATTCTCCTACATATCGACTCGCACCTCTACTTACTTCCACCTCCCTAAACGTAGAAAGGAGAGCATAGAAGCTACTGTCAGACTTAGTGTGCAGAAAATATTGTTAGAGGAGAGAGAGAAGATAGTAGAGGAGGAAAGGGAGAAGATACTAGAGGAGGCAAGGGAGAAGATAATCAAGGAGGCAAGGGAAAAAATTGTTGCAGATGAGCGGGCTATGTGGGAGGCCAAGTTTGCTGAACTTGAAGCAAAGGTAAATGGAAAAGAGGCTGCAACTATTCACCCACATGTATCTGGCCATGGAAGCTGCTCAATGACAGCTGATGAGATTGCTCAAGAAACGGATAAAGCTCCGTTGGAAGAAGTAGTGAACAATGTGGATGGAACTAAAATTCTGAGCGTTTTTGAAGCAATGGAAAACAAAACCATCATGTGTAAAAGGAAAGGGAGAAAGGTTGTTAAGGAAGGCAGATTGGATAAAAGTCCCGGGTGCAAGAAAGGTAATGAGTTTCCCAAGTTGCTTGAGAAAGTAGTTGTCAACCGTGAGGAGGAAAATGAGGCTGTTGAAGAAAATGTCAATATGATAGATATCAAGGAGCCGGAGAATGAGGAGGGGGCAGAATATGTGGATTTGACGATGCGTCAACCTACATTAAAGTCAAAGGTAGCTGAGGTTGATTGCAAGTTGGCAATAGGGTCTGTTGAACATATTGTTACTTATGCCACTGTTATGGAGTGCGAGGATCCTTCCCAACTCGTTCATGGCACTCCACTTGGGGATGGTAATGTGCGTGTTTCTATCTATGCCGCGCTTGAGGAGAAAGCAAAAGTGCCATTTCCTGTGAAAGATGAAATTGAAACAGTGAAGCAGGCTATGGGGAGTTGGGTCGCATGGCCTAAACACCTAGTCATAAAATCTGCAGTCAAGAAACCTACCAAGGATAATGCTGATAAGAAGAAGAAAAGAAAAGAGATAGGGGAAGAAGACTCGGAGATTGAATTTGGCTTGGCCAAATTGGCACCATCGTTGCCAGCTTCATTGAAGATGTTATGTTTGTGGGGTGAGGATGCATTCAAAGATGGGAATACAATCAGCTTCTACATGGAGCCTGAAGTGTTTGGATATTCTCGCAAGACATTTATATTGGGAAAAAATGTTAGGCGACTTGCAAGCATGAGGGAAGTAACTGGAACTTGCATTGCAGTGTACCAGAGGTACCTCTATGATAAGTTGAAGGCTTATAAAATGCTGGACATGGTTGCGTTTGTTGACCCTTCACTTATTGGTGCTGTGGGGTGTGGGAATGGAACTGTCAAGGCCCAACACATCAAAGATAGGCTTGTAACTGCTAAACCAGGGCAGATGTTCATGCTGCCATATAACTCGGGGTTAGTTAATGAACGTTTGCAAACTTTCATATCTACTGTGTCTGAACATAAAAATTTAGTGTTCAAGATATATGACATTTTGTATGCATGTAGTGATCATTGGATGTTGACACTTGTTGATCCGGAGAAAGGAACCGCCTATTTTATGGACCCGCTAAAAAGACGCTTACCTCTAGGAGATTGGATGTCTATCGTGGATACTGCTATGCGTATGTATAATGCTGAAAAGAATAAGCAAAGCCGGAGTTCACTCCATTGGAAAATTTTGGCTGGCATTCCTCCCCAACCTAGCAACAAGGAGTGCGGGTACTTTATCATGCGATACATGAGAGATATGATTGAGGATAAAGACATGTCATTGTTTCCTTCCAAGTGGGAGAGGAGAGGCAGCAGCCAGTACACCCAAGCGGATATTGATCAAGTGCGAAATGAGTGGGGGAAGTTTGTTGTCAACACATATGTGCACGAGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
PHF5

Protein Analysis

666

Amino Acids

75.56

Weight (kDa)

7.17

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8039 PF26133 271 - 350 1.7e-12 Domain of unknown function (DUF8039)
Peptidase_C48 PF02902 540 - 628 5.5e-08 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0030101)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0406291
rosa_rugosa Rorug04G0067500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1380
Acc65I GGTACC 1 cut(s) 1353
AccB1I GGYRCC 2 cut(s) 1156, 1353
AccBSI CCGCTC 1 cut(s) 349
AccII CGCG 1 cut(s) 947
AccIII TCCGGA 1 cut(s) 1648
AciI CCGC 6 cut(s) 349, 945, 1662, 1679, 1830, 1934
AclI AACGTT 1 cut(s) 1540
AclWI GGATC 5 cut(s) 38, 139, 875, 888, 1640
AcoI YGGCCR 2 cut(s) 433, 1146
AcsI RAATTY 6 cut(s) 87, 118, 528, 1136, 1579, 1788
AcuI CTGAAG 2 cut(s) 55, 1269
AfaI GTAC 4 cut(s) 1346, 1355, 1835, 1925
AfiI CCNNNNNNNGG 2 cut(s) 685, 1655
AflII CTTAAG 1 cut(s) 43
AflIII ACRYGT 2 cut(s) 424, 1878
AhdI GACNNNNNGTC 1 cut(s) 777
AjnI CCWGG 1 cut(s) 1492
AleI CACNNNNGTG 1 cut(s) 1985
Alw21I GWGCWC 1 cut(s) 1992
Alw26I GTCTC 1 cut(s) 44
Alw44I GTGCAC 1 cut(s) 1988
AlwI GGATC 5 cut(s) 38, 139, 875, 888, 1640
Ama87I CYCGRG 3 cut(s) 34, 623, 1522
Aor13HI TCCGGA 1 cut(s) 1648
AoxI GGCC 5 cut(s) 363, 433, 1031, 1146, 1455
ApaLI GTGCAC 1 cut(s) 1988
ApeKI GCWGC 5 cut(s) 407, 444, 1510, 1914, 1917
ApoI RAATTY 6 cut(s) 87, 118, 528, 1136, 1579, 1788
Asp718I GGTACC 1 cut(s) 1353
AspLEI GCGC 1 cut(s) 949
AspS9I GGNCC 3 cut(s) 82, 1456, 1675
AsuC2I CCSGG 2 cut(s) 624, 625
AsuHPI GGTGA 2 cut(s) 410, 1211
AvaI CYCGRG 3 cut(s) 34, 623, 1522
AvaII GGWCC 2 cut(s) 82, 1675
BaeGI GKGCMC 1 cut(s) 1992
BalI TGGCCA 2 cut(s) 435, 1148
BamHI GGATCC 1 cut(s) 880
BanI GGYRCC 2 cut(s) 1156, 1353
BauI CACGAG 1 cut(s) 1991
BbsI GAAGAC 1 cut(s) 1128
Bbv12I GWGCWC 1 cut(s) 1992
BbvCI CCTCAGC 1 cut(s) 807
BbvI GCAGC 5 cut(s) 394, 431, 1497, 1926, 1929
BccI CCATC 5 cut(s) 512, 572, 911, 1168, 1211
BciT130I CCWGG 1 cut(s) 1494
BciVI GTATCC 1 cut(s) 1717
BclI TGATCA 2 cut(s) 1621, 1942
BcnI CCSGG 2 cut(s) 624, 625
BcoDI GTCTC 1 cut(s) 44
BfaI CTAG 4 cut(s) 290, 1043, 1700, 1815
BfmI CTRYAG 1 cut(s) 1056
BfrI CTTAAG 1 cut(s) 43
BfuI GTATCC 1 cut(s) 1717
BglI GCCNNNNNGGC 1 cut(s) 1154
BisI GCNGC 6 cut(s) 408, 445, 945, 1511, 1915, 1918
BlsI GCNGC 6 cut(s) 409, 446, 946, 1512, 1916, 1919
Bme1390I CCNGG 3 cut(s) 624, 625, 1494
Bme18I GGWCC 2 cut(s) 82, 1675
BmeRI GACNNNNNGTC 1 cut(s) 777
BmeT110I CYCGRG 3 cut(s) 34, 623, 1522
BmgT120I GGNCC 3 cut(s) 82, 1456, 1675
BmiI GGNNCC 7 cut(s) 735, 882, 1158, 1245, 1355, 1660, 1677
BmrFI CCNGG 3 cut(s) 624, 625, 1494
BmsI GCATC 2 cut(s) 765, 1195
BpiI GAAGAC 1 cut(s) 1128
Bpu10I CCTNAGC 1 cut(s) 807
BpuEI CTTGAG 3 cut(s) 456, 680, 971
BpuMI CCSGG 2 cut(s) 624, 625
BsaBI GATNNNNATC 3 cut(s) 725, 1715, 1941
BsaI GGTCTC 1 cut(s) 44
BsaJI CCNNGG 4 cut(s) 436, 623, 1074, 1493
BsaWI WCCGGW 1 cut(s) 1648
BsaXI ACNNNNNCTCC 4 cut(s) 353, 383, 1817, 1847
Bsc4I CCNNNNNNNGG 2 cut(s) 685, 1655
Bse1I ACTGG 3 cut(s) 142, 1330, 1921
Bse3DI GCAATG 2 cut(s) 555, 1335
Bse8I GATNNNNATC 3 cut(s) 725, 1715, 1941
BseAI TCCGGA 1 cut(s) 1648
BseBI CCWGG 1 cut(s) 1494
BseDI CCNNGG 4 cut(s) 436, 623, 1074, 1493
BseGI GGATG 5 cut(s) 523, 922, 1210, 1635, 1716
BseJI GATNNNNATC 3 cut(s) 725, 1715, 1941
BseLI CCNNNNNNNGG 2 cut(s) 685, 1655
BseMI GCAATG 2 cut(s) 555, 1335
BseMII CTCAG 2 cut(s) 524, 798
BseNI ACTGG 3 cut(s) 142, 1330, 1921
BseRI GAGGAG 7 cut(s) 263, 284, 308, 698, 761, 968, 1921
BseSI GKGCMC 1 cut(s) 1992
BseXI GCAGC 5 cut(s) 394, 431, 1497, 1926, 1929
BsgI GTGCAG 1 cut(s) 251
Bsh1236I CGCG 1 cut(s) 947
BshFI GGCC 5 cut(s) 365, 435, 1033, 1148, 1457
BshNI GGYRCC 2 cut(s) 1156, 1353
BsiHKAI GWGCWC 1 cut(s) 1992
BsiHKCI CYCGRG 3 cut(s) 34, 623, 1522
BsiSI CCGG 4 cut(s) 624, 737, 1649, 1768
BslFI GGGAC 1 cut(s) 606
BslI CCNNNNNNNGG 2 cut(s) 685, 1655
BsmAI GTCTC 1 cut(s) 44
BsmFI GGGAC 1 cut(s) 606
BsmI GAATGC 2 cut(s) 1208, 1800
BsnI GGCC 5 cut(s) 365, 435, 1033, 1148, 1457
Bso31I GGTCTC 1 cut(s) 44
BsoBI CYCGRG 3 cut(s) 34, 623, 1522
Bsp1286I GDGCHC 1 cut(s) 1992
Bsp13I TCCGGA 1 cut(s) 1648
Bsp143I GATC 7 cut(s) 30, 124, 131, 880, 1621, 1645, 1942
Bsp19I CCATGG 1 cut(s) 436
BspACI CCGC 6 cut(s) 349, 945, 1662, 1679, 1830, 1934
BspANI GGCC 5 cut(s) 365, 435, 1033, 1148, 1457
BspCNI CTCAG 2 cut(s) 525, 799
BspEI TCCGGA 1 cut(s) 1648
BspFNI CGCG 1 cut(s) 947
BspHI TCATGA 1 cut(s) 1997
BspLI GGNNCC 7 cut(s) 735, 882, 1158, 1245, 1355, 1660, 1677
BspMAI CTGCAG 1 cut(s) 1060
BspPI GGATC 5 cut(s) 38, 139, 875, 888, 1640
BspQI GCTCTTC 1 cut(s) 74
BspT107I GGYRCC 2 cut(s) 1156, 1353
BspTI CTTAAG 1 cut(s) 43
BspTNI GGTCTC 1 cut(s) 44
BsrBI CCGCTC 1 cut(s) 349
BsrDI GCAATG 2 cut(s) 555, 1335
BsrI ACTGG 3 cut(s) 142, 1330, 1921
BssECI CCNNGG 4 cut(s) 436, 623, 1074, 1493
BssMI GATC 7 cut(s) 30, 124, 131, 880, 1621, 1645, 1942
BssSI CACGAG 1 cut(s) 1991
BssT1I CCWWGG 2 cut(s) 436, 1074
Bst2BI CACGAG 1 cut(s) 1991
Bst2UI CCWGG 1 cut(s) 1494
Bst4CI ACNGT 6 cut(s) 217, 680, 865, 1000, 1450, 1564
Bst6I CTCTTC 1 cut(s) 74
BstAFI CTTAAG 1 cut(s) 43
BstC8I GCNNGC 5 cut(s) 351, 1008, 1170, 1309, 1798
BstDEI CTNAG 3 cut(s) 224, 533, 807
BstDSI CCRYGG 1 cut(s) 436
BstF5I GGATG 5 cut(s) 523, 922, 1210, 1635, 1716
BstFNI CGCG 1 cut(s) 947
BstHHI GCGC 1 cut(s) 949
BstKTI GATC 7 cut(s) 33, 127, 134, 883, 1624, 1648, 1945
BstMAI GTCTC 1 cut(s) 44
BstMBI GATC 7 cut(s) 30, 124, 131, 880, 1621, 1645, 1942
BstMWI GCNNNNNNNGC 3 cut(s) 371, 441, 1154
BstNI CCWGG 1 cut(s) 1494
BstNSI RCATGY 3 cut(s) 428, 1617, 1882
BstSCI CCNGG 3 cut(s) 622, 623, 1492
BstSFI CTRYAG 1 cut(s) 1056
BstSLI GKGCMC 1 cut(s) 1992
BstUI CGCG 1 cut(s) 947
BstV1I GCAGC 5 cut(s) 394, 431, 1497, 1926, 1929
BstV2I GAAGAC 1 cut(s) 1128
BstX2I RGATCY 3 cut(s) 30, 131, 880
BstXI CCANNNNNNTGG 1 cut(s) 868
BstYI RGATCY 3 cut(s) 30, 131, 880
BsuI GTATCC 1 cut(s) 1717
BsuRI GGCC 5 cut(s) 365, 435, 1033, 1148, 1457
BtgI CCRYGG 1 cut(s) 436
BtsCI GGATG 5 cut(s) 523, 922, 1210, 1635, 1716
BtsI GCAGTG 1 cut(s) 1347
BtsIMutI CAGTG 3 cut(s) 861, 1005, 1347
Cac8I GCNNGC 5 cut(s) 351, 1008, 1170, 1309, 1798
CciI TCATGA 1 cut(s) 1997
CfoI GCGC 1 cut(s) 949
Cfr13I GGNCC 3 cut(s) 82, 1456, 1675
Cfr9I CCCGGG 1 cut(s) 623
CseI GACGC 2 cut(s) 767, 1698
Csp6I GTAC 4 cut(s) 1345, 1354, 1834, 1924
CviQI GTAC 4 cut(s) 1345, 1354, 1834, 1924
DdeI CTNAG 3 cut(s) 224, 533, 807
DpnI GATC 7 cut(s) 32, 126, 133, 882, 1623, 1647, 1944
DpnII GATC 7 cut(s) 30, 124, 131, 880, 1621, 1645, 1942
DriI GACNNNNNGTC 1 cut(s) 777
EaeI YGGCCR 2 cut(s) 433, 1146
Eam1104I CTCTTC 1 cut(s) 74
Eam1105I GACNNNNNGTC 1 cut(s) 777
EarI CTCTTC 1 cut(s) 74
Eco130I CCWWGG 2 cut(s) 436, 1074
Eco31I GGTCTC 1 cut(s) 44
Eco32I GATATC 1 cut(s) 727
Eco47I GGWCC 2 cut(s) 82, 1675
Eco57I CTGAAG 2 cut(s) 55, 1269
Eco88I CYCGRG 3 cut(s) 34, 623, 1522
EcoRII CCWGG 1 cut(s) 1492
EcoRV GATATC 1 cut(s) 727
EcoT14I CCWWGG 2 cut(s) 436, 1074
EcoT22I ATGCAT 2 cut(s) 1210, 1615
ErhI CCWWGG 2 cut(s) 436, 1074
FalI AAGNNNNNCTT 2 cut(s) 1461, 1493
FaqI GGGAC 1 cut(s) 606
FauI CCCGC 3 cut(s) 342, 1686, 1823
FauNDI CATATG 1 cut(s) 1984
FbaI TGATCA 2 cut(s) 1621, 1942
Fnu4HI GCNGC 6 cut(s) 408, 445, 945, 1511, 1915, 1918
FokI GGATG 5 cut(s) 530, 929, 1217, 1642, 1723
Fsp4HI GCNGC 6 cut(s) 408, 445, 945, 1511, 1915, 1918
FspBI CTAG 4 cut(s) 290, 1043, 1700, 1815
GlaI GCGC 1 cut(s) 948
GluI GCNGC 6 cut(s) 408, 445, 945, 1511, 1915, 1918
HaeIII GGCC 5 cut(s) 365, 435, 1033, 1148, 1457
HapII CCGG 4 cut(s) 624, 737, 1649, 1768
HgaI GACGC 2 cut(s) 767, 1698
HhaI GCGC 1 cut(s) 949
Hin6I GCGC 1 cut(s) 947
HinP1I GCGC 1 cut(s) 947
HincII GTYRAC 5 cut(s) 676, 782, 1408, 1635, 1978
HindII GTYRAC 5 cut(s) 676, 782, 1408, 1635, 1978
HinfI GANTC 5 cut(s) 4, 141, 157, 1124, 1994
HpaII CCGG 4 cut(s) 624, 737, 1649, 1768
HphI GGTGA 2 cut(s) 410, 1211
Hpy188I TCNGA 8 cut(s) 30, 52, 82, 131, 221, 534, 1129, 1570
Hpy188III TCNNGA 5 cut(s) 473, 1063, 1591, 1649, 1998
HpyAV CCTTC 5 cut(s) 596, 894, 1366, 1422, 1902
HpyCH4III ACNGT 6 cut(s) 217, 680, 865, 1000, 1450, 1564
HpyCH4IV ACGT 2 cut(s) 190, 1540
HpyF10VI GCNNNNNNNGC 3 cut(s) 371, 441, 1154
HpyF3I CTNAG 3 cut(s) 224, 533, 807
HpySE526I ACGT 2 cut(s) 190, 1540
HspAI GCGC 1 cut(s) 947
Kpn2I TCCGGA 1 cut(s) 1648
KpnI GGTACC 1 cut(s) 1357
Ksp22I TGATCA 2 cut(s) 1621, 1942
Kzo9I GATC 7 cut(s) 30, 124, 131, 880, 1621, 1645, 1942
LguI GCTCTTC 1 cut(s) 74
LmnI GCTCC 4 cut(s) 53, 493, 733, 1243
Lsp1109I GCAGC 5 cut(s) 394, 431, 1497, 1926, 1929
LweI GCATC 2 cut(s) 765, 1195
MaeI CTAG 4 cut(s) 290, 1043, 1700, 1815
MaeII ACGT 2 cut(s) 190, 1540
MaeIII GTNAC 3 cut(s) 850, 1321, 1480
MalI GATC 7 cut(s) 32, 126, 133, 882, 1623, 1647, 1944
MbiI CCGCTC 1 cut(s) 349
MboI GATC 7 cut(s) 30, 124, 131, 880, 1621, 1645, 1942
MflI RGATCY 3 cut(s) 30, 131, 880
MhlI GDGCHC 1 cut(s) 1992
MlsI TGGCCA 2 cut(s) 435, 1148
MluCI AATT 9 cut(s) 87, 118, 333, 528, 990, 1136, 1151, 1579, 1788
MluNI TGGCCA 2 cut(s) 435, 1148
MlyI GAGTC 2 cut(s) 151, 1118
MmeI TCCRAC 1 cut(s) 474
Mox20I TGGCCA 2 cut(s) 435, 1148
Mph1103I ATGCAT 2 cut(s) 1210, 1615
MroI TCCGGA 1 cut(s) 1648
MscI TGGCCA 2 cut(s) 435, 1148
MseI TTAA 4 cut(s) 44, 597, 791, 1533
MslI CAYNNNNRTG 4 cut(s) 423, 866, 1340, 1985
Msp20I TGGCCA 2 cut(s) 435, 1148
MspA1I CMGCKG 1 cut(s) 458
MspCI CTTAAG 1 cut(s) 43
MspI CCGG 4 cut(s) 624, 737, 1649, 1768
MspR9I CCNGG 3 cut(s) 624, 625, 1494
Mva1269I GAATGC 2 cut(s) 1208, 1800
MvaI CCWGG 1 cut(s) 1494
MvnI CGCG 1 cut(s) 947
MwoI GCNNNNNNNGC 3 cut(s) 371, 441, 1154
NciI CCSGG 2 cut(s) 624, 625
NcoI CCATGG 1 cut(s) 436
NdeI CATATG 1 cut(s) 1984
NdeII GATC 7 cut(s) 30, 124, 131, 880, 1621, 1645, 1942
NlaIV GGNNCC 7 cut(s) 735, 882, 1158, 1245, 1355, 1660, 1677
NsiI ATGCAT 2 cut(s) 1210, 1615
NspI RCATGY 3 cut(s) 428, 1617, 1882
OliI CACNNNNGTG 1 cut(s) 1985
PagI TCATGA 1 cut(s) 1997
PciI ACATGT 2 cut(s) 424, 1878
PciSI GCTCTTC 1 cut(s) 74
PctI GAATGC 2 cut(s) 1208, 1800
PfeI GAWTC 1 cut(s) 141
PkrI GCNGC 6 cut(s) 409, 446, 946, 1512, 1916, 1919
PleI GAGTC 2 cut(s) 151, 1118
PpsI GAGTC 2 cut(s) 151, 1118
PscI ACATGT 2 cut(s) 424, 1878
PsiI TTATAA 1 cut(s) 1380
Psp1406I AACGTT 1 cut(s) 1540
Psp6I CCWGG 1 cut(s) 1492
PspGI CCWGG 1 cut(s) 1492
PspN4I GGNNCC 7 cut(s) 735, 882, 1158, 1245, 1355, 1660, 1677
PspPI GGNCC 3 cut(s) 82, 1456, 1675
PstI CTGCAG 1 cut(s) 1060
PsuI RGATCY 3 cut(s) 30, 131, 880
PvuII CAGCTG 1 cut(s) 458
RsaI GTAC 4 cut(s) 1346, 1355, 1835, 1925
RsaNI GTAC 4 cut(s) 1345, 1354, 1834, 1924
RseI CAYNNNNRTG 4 cut(s) 423, 866, 1340, 1985
SapI GCTCTTC 1 cut(s) 74
SaqAI TTAA 4 cut(s) 44, 597, 791, 1533
SatI GCNGC 6 cut(s) 408, 445, 945, 1511, 1915, 1918
Sau3AI GATC 7 cut(s) 30, 124, 131, 880, 1621, 1645, 1942
Sau96I GGNCC 3 cut(s) 82, 1456, 1675
SchI GAGTC 2 cut(s) 151, 1118
ScrFI CCNGG 3 cut(s) 624, 625, 1494
SduI GDGCHC 1 cut(s) 1992
SfaNI GCATC 2 cut(s) 765, 1195
SfcI CTRYAG 1 cut(s) 1056
SinI GGWCC 2 cut(s) 82, 1675
SmaI CCCGGG 1 cut(s) 625
SmiMI CAYNNNNRTG 4 cut(s) 423, 866, 1340, 1985
SmlI CTYRAG 4 cut(s) 43, 471, 659, 950
SmoI CTYRAG 4 cut(s) 43, 471, 659, 950
Sse9I AATT 9 cut(s) 87, 118, 333, 528, 990, 1136, 1151, 1579, 1788
SsiI CCGC 6 cut(s) 349, 945, 1662, 1679, 1830, 1934
SspI AATATT 1 cut(s) 240
SspMI CTAG 4 cut(s) 290, 1043, 1700, 1815
StyD4I CCNGG 3 cut(s) 622, 623, 1492
StyI CCWWGG 2 cut(s) 436, 1074
TaaI ACNGT 6 cut(s) 217, 680, 865, 1000, 1450, 1564
TaiI ACGT 2 cut(s) 193, 1543
TaqI TCGA 3 cut(s) 15, 123, 155
TasI AATT 9 cut(s) 87, 118, 333, 528, 990, 1136, 1151, 1579, 1788
TatI WGTACW 1 cut(s) 1923
TauI GCSGC 1 cut(s) 947
TfiI GAWTC 1 cut(s) 141
Tru1I TTAA 4 cut(s) 44, 597, 791, 1533
Tru9I TTAA 4 cut(s) 44, 597, 791, 1533
TscAI CASTG 3 cut(s) 868, 1005, 1347
TseI GCWGC 5 cut(s) 407, 444, 1510, 1914, 1917
TspDTI ATGAA 6 cut(s) 887, 1002, 1164, 1495, 1543, 1551
TspGWI ACGGA 2 cut(s) 480, 494
TspMI CCCGGG 1 cut(s) 623
TspRI CASTG 3 cut(s) 868, 1005, 1347
Vha464I CTTAAG 1 cut(s) 43
VneI GTGCAC 1 cut(s) 1988
VpaK11BI GGWCC 2 cut(s) 82, 1675
XapI RAATTY 6 cut(s) 87, 118, 528, 1136, 1579, 1788
XceI RCATGY 3 cut(s) 428, 1617, 1882
XcmI CCANNNNNNNNNTGG 1 cut(s) 896
XmaI CCCGGG 1 cut(s) 623
XspI CTAG 4 cut(s) 290, 1043, 1700, 1815
Zsp2I ATGCAT 2 cut(s) 1210, 1615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.