Rorug07G0332300

low affinity sulfate transporter

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
36399180 .. 36399347
168 bp
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UTR
Exon/CDS
Intron
Rorug07G0332300.1

Sequence Viewer

Length: 168 bp
ATGGCTGCTCATTCGTCTTGGCATGCAAAGTTGTTAGCTTTGATTTTGGGTGCACACTTGGTTCTTGAACACCATTTTACACCCGCAATAATTGAATCAGATTTTTTGGATTTGGTTCATGCCATTACTAGCTCATCTCTATCATTCGGAGCTTGGCTTCCTGATTAA

Protein Analysis

55

Amino Acids

5.99

Weight (kDa)

5.73

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G77990
fragaria_vesca FvH4_5g38080
prunus_persica Prupe.1G511600_v2.0.a1 Prupe.1G511600_v2.0.a1
pyrus_communis pycom08g15210
rosa_chinensis RchiOBHm_Chr7g0240041
rosa_laevigata RLG00000000711
rosa_multiflora Rmu_sc0000540.1_g000006
rosa_roxburghii Rroxscaffold_3G00220500
rosa_rugosa Rorug07G0332200 Rorug07G0332300
rosa_samantha Rh7AG485700 Rh7BG458800 Rh7CG503000 Rh7DG471400
rosa_wichuraiana Rw7G040720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 84
AgsI TTSAA 2 cut(s) 68, 95
AluBI AGCT 3 cut(s) 38, 132, 152
AluI AGCT 3 cut(s) 38, 132, 152
Alw21I GWGCWC 1 cut(s) 55
Alw44I GTGCAC 1 cut(s) 51
ApaLI GTGCAC 1 cut(s) 51
ApeKI GCWGC 1 cut(s) 5
BaeGI GKGCMC 1 cut(s) 55
Bbv12I GWGCWC 1 cut(s) 55
BfaI CTAG 1 cut(s) 129
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
BseSI GKGCMC 1 cut(s) 55
BsiHKAI GWGCWC 1 cut(s) 55
Bsp1286I GDGCHC 1 cut(s) 55
BspACI CCGC 1 cut(s) 84
BstC8I GCNNGC 1 cut(s) 24
BstNSI RCATGY 1 cut(s) 26
BstSLI GKGCMC 1 cut(s) 55
Cac8I GCNNGC 1 cut(s) 24
CviAII CATG 2 cut(s) 23, 119
CviJI RGCY 5 cut(s) 5, 38, 132, 152, 157
CviKI_1 RGCY 5 cut(s) 5, 38, 132, 152, 157
FaeI CATG 2 cut(s) 26, 122
FaiI YATR 2 cut(s) 24, 120
FatI CATG 2 cut(s) 22, 118
FauI CCCGC 1 cut(s) 91
Fnu4HI GCNGC 1 cut(s) 6
Fsp4HI GCNGC 1 cut(s) 6
FspBI CTAG 1 cut(s) 129
GluI GCNGC 1 cut(s) 6
Hin1II CATG 2 cut(s) 26, 122
HinfI GANTC 1 cut(s) 95
Hpy166II GTNNAC 1 cut(s) 53
Hpy188I TCNGA 2 cut(s) 100, 149
Hpy188III TCNNGA 2 cut(s) 65, 161
Hpy8I GTNNAC 1 cut(s) 53
HpyCH4V TGCA 2 cut(s) 26, 53
Hsp92II CATG 2 cut(s) 26, 122
LmnI GCTCC 1 cut(s) 149
MaeI CTAG 1 cut(s) 129
MhlI GDGCHC 1 cut(s) 55
MluCI AATT 1 cut(s) 90
MseI TTAA 1 cut(s) 166
NlaIII CATG 2 cut(s) 26, 122
NspI RCATGY 1 cut(s) 26
PaeI GCATGC 1 cut(s) 26
PfeI GAWTC 1 cut(s) 95
PkrI GCNGC 1 cut(s) 7
SaqAI TTAA 1 cut(s) 166
SatI GCNGC 1 cut(s) 6
SduI GDGCHC 1 cut(s) 55
SetI ASST 3 cut(s) 40, 134, 154
SgeI CNNG 7 cut(s) 30, 35, 70, 77, 95, 131, 141
SphI GCATGC 1 cut(s) 26
Sse9I AATT 1 cut(s) 90
SsiI CCGC 1 cut(s) 84
SspMI CTAG 1 cut(s) 129
TasI AATT 1 cut(s) 90
TfiI GAWTC 1 cut(s) 95
Tru1I TTAA 1 cut(s) 166
Tru9I TTAA 1 cut(s) 166
TseI GCWGC 1 cut(s) 5
TspDTI ATGAA 1 cut(s) 107
VneI GTGCAC 1 cut(s) 51
XceI RCATGY 1 cut(s) 26
XspI CTAG 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.