Rh1BG213100

phosphatase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Reverse (-)
33221565 .. 33222574
1010 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG213100.1

Sequence Viewer

Length: 282 bp
ATGCATTGGAATATGGATTGCCATCTTCTCACACTATATACACAGTTTGCTTGTCTAGATACCTTTTGCATTGCATCCTATCTTATGCTCATAATGAAGAGGCCTATTCCTGTTGATATCATTGGTGAGCTTGTTGTTGGTTGGCTGATCCTTTCCTTTTGGCTTACTGTTCATGAATATGTCGATAGTTTTGTAGTCTCAGGACAAAATGCTTGCAAGGTGAGCTTTAGGGCTGTACACGTTTCTACATTGGTGTGGCTGCTGTTGGGATTGAATGCATGA

Protein Analysis

93

Amino Acids

10.63

Weight (kDa)

5.99

Isoelectric Point (pI)

40.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0033260)

Species Orthologous Gene IDs
rosa_samantha Rh1BG213100 Rh7DG436100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 142
AfaI GTAC 1 cut(s) 237
AflIII ACRYGT 1 cut(s) 238
AgsI TTSAA 1 cut(s) 274
AluBI AGCT 2 cut(s) 130, 225
AluI AGCT 2 cut(s) 130, 225
Alw26I GTCTC 1 cut(s) 202
AlwI GGATC 1 cut(s) 142
AoxI GGCC 1 cut(s) 101
ApeKI GCWGC 1 cut(s) 259
AsuHPI GGTGA 2 cut(s) 137, 232
BbvI GCAGC 1 cut(s) 246
BccI CCATC 1 cut(s) 30
BcoDI GTCTC 1 cut(s) 202
BfaI CTAG 1 cut(s) 56
BisI GCNGC 1 cut(s) 260
BlsI GCNGC 1 cut(s) 261
BmsI GCATC 1 cut(s) 83
BsaBI GATNNNNATC 1 cut(s) 21
Bse3DI GCAATG 1 cut(s) 69
Bse8I GATNNNNATC 1 cut(s) 21
BseGI GGATG 1 cut(s) 74
BseJI GATNNNNATC 1 cut(s) 21
BseMI GCAATG 1 cut(s) 69
BseMII CTCAG 1 cut(s) 213
BseXI GCAGC 1 cut(s) 246
BshFI GGCC 1 cut(s) 103
BsmAI GTCTC 1 cut(s) 202
BsmI GAATGC 1 cut(s) 280
BsnI GGCC 1 cut(s) 103
Bsp1407I TGTACA 1 cut(s) 235
Bsp143I GATC 1 cut(s) 147
BspANI GGCC 1 cut(s) 103
BspCNI CTCAG 1 cut(s) 212
BspHI TCATGA 1 cut(s) 172
BspPI GGATC 1 cut(s) 142
BsrDI GCAATG 1 cut(s) 69
BsrGI TGTACA 1 cut(s) 235
BssMI GATC 1 cut(s) 147
Bst4CI ACNGT 2 cut(s) 45, 169
Bst6I CTCTTC 1 cut(s) 92
BstAUI TGTACA 1 cut(s) 235
BstC8I GCNNGC 1 cut(s) 214
BstDEI CTNAG 1 cut(s) 199
BstF5I GGATG 1 cut(s) 74
BstKTI GATC 1 cut(s) 150
BstMAI GTCTC 1 cut(s) 202
BstMBI GATC 1 cut(s) 147
BstMWI GCNNNNNNNGC 1 cut(s) 222
BstV1I GCAGC 1 cut(s) 246
BsuRI GGCC 1 cut(s) 103
BtsCI GGATG 1 cut(s) 74
Cac8I GCNNGC 1 cut(s) 214
CciI TCATGA 1 cut(s) 172
Csp6I GTAC 1 cut(s) 236
CviAII CATG 2 cut(s) 173, 279
CviJI RGCY 7 cut(s) 103, 130, 145, 163, 225, 233, 259
CviKI_1 RGCY 7 cut(s) 103, 130, 145, 163, 225, 233, 259
CviQI GTAC 1 cut(s) 236
DdeI CTNAG 1 cut(s) 199
DpnI GATC 1 cut(s) 149
DpnII GATC 1 cut(s) 147
Eam1104I CTCTTC 1 cut(s) 92
EarI CTCTTC 1 cut(s) 92
Eco147I AGGCCT 1 cut(s) 103
Eco32I GATATC 1 cut(s) 118
EcoRV GATATC 1 cut(s) 118
EcoT22I ATGCAT 2 cut(s) 6, 280
FaeI CATG 2 cut(s) 176, 282
FaiI YATR 8 cut(s) 14, 37, 39, 86, 92, 174, 180, 280
FalI AAGNNNNNCTT 2 cut(s) 209, 241
FatI CATG 2 cut(s) 172, 278
Fnu4HI GCNGC 1 cut(s) 260
FokI GGATG 1 cut(s) 61
Fsp4HI GCNGC 1 cut(s) 260
FspBI CTAG 1 cut(s) 56
GluI GCNGC 1 cut(s) 260
HaeIII GGCC 1 cut(s) 103
Hin1II CATG 2 cut(s) 176, 282
HphI GGTGA 2 cut(s) 137, 232
Hpy166II GTNNAC 1 cut(s) 238
Hpy188III TCNNGA 3 cut(s) 56, 173, 201
Hpy8I GTNNAC 1 cut(s) 238
HpyCH4III ACNGT 2 cut(s) 45, 169
HpyCH4IV ACGT 1 cut(s) 240
HpyCH4V TGCA 5 cut(s) 4, 69, 74, 216, 278
HpyF10VI GCNNNNNNNGC 1 cut(s) 222
HpyF3I CTNAG 1 cut(s) 199
HpySE526I ACGT 1 cut(s) 240
Hsp92II CATG 2 cut(s) 176, 282
Kzo9I GATC 1 cut(s) 147
LpnPI CCDG 2 cut(s) 123, 186
Lsp1109I GCAGC 1 cut(s) 246
LweI GCATC 1 cut(s) 83
MaeI CTAG 1 cut(s) 56
MaeII ACGT 1 cut(s) 240
MalI GATC 1 cut(s) 149
MboI GATC 1 cut(s) 147
MboII GAAGA 2 cut(s) 17, 109
MnlI CCTC 1 cut(s) 93
Mph1103I ATGCAT 2 cut(s) 6, 280
MslI CAYNNNNRTG 2 cut(s) 177, 253
Mva1269I GAATGC 1 cut(s) 280
MwoI GCNNNNNNNGC 1 cut(s) 222
NdeII GATC 1 cut(s) 147
NlaIII CATG 2 cut(s) 176, 282
NsiI ATGCAT 2 cut(s) 6, 280
PagI TCATGA 1 cut(s) 172
PceI AGGCCT 1 cut(s) 103
PctI GAATGC 1 cut(s) 280
PkrI GCNGC 1 cut(s) 261
RsaI GTAC 1 cut(s) 237
RsaNI GTAC 1 cut(s) 236
RseI CAYNNNNRTG 2 cut(s) 177, 253
SatI GCNGC 1 cut(s) 260
Sau3AI GATC 1 cut(s) 147
SetI ASST 5 cut(s) 65, 132, 222, 227, 243
SfaNI GCATC 1 cut(s) 83
SgeI CNNG 9 cut(s) 63, 68, 122, 143, 185, 213, 225, 229, 251
SmiMI CAYNNNNRTG 2 cut(s) 177, 253
SseBI AGGCCT 1 cut(s) 103
SspMI CTAG 1 cut(s) 56
StuI AGGCCT 1 cut(s) 103
TaaI ACNGT 2 cut(s) 45, 169
TaiI ACGT 1 cut(s) 243
TaqI TCGA 1 cut(s) 183
TatI WGTACW 1 cut(s) 235
TseI GCWGC 1 cut(s) 259
TspDTI ATGAA 3 cut(s) 110, 161, 189
XbaI TCTAGA 1 cut(s) 55
XspI CTAG 1 cut(s) 56
Zsp2I ATGCAT 2 cut(s) 6, 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.