Rh1CG316100
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
59151148 .. 59151495
348 bp
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UTR
Exon/CDS
Intron
Rh1CG316100.1

Sequence Viewer

Length: 348 bp
ATGGTTCTTGGAAAGATGCGGGAGATTGCTGAGGCTTATTTAGGCTCAACTGTGAGGAATGCAGTCATCACCGCCCTTGCTTACTTCAATGACTCACAGCGTCAGGCTACTAATACTGCTGCTGTCACTGCTGGCCTAAAGGTGATGTGCATTATCAACGAACCAACTGCTGCAATCATTGCTTATGGGATTGACAATAAAGTTGGTTGGTATAGCAAGAGAAATGTGATGATATTTGATTTAGGTGGTGGTACTATAGATGTCTCACTGCTAGCAATAAGTTCTGGTGTCTTTGAAGTCAAGGCTACGGCTGGAGACACCCATCTAGGAGGGGGAAGATTTCAGTAA
Functional Annotation

Protein Analysis

115

Amino Acids

12.16

Weight (kDa)

7.87

Isoelectric Point (pI)

25.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 1 - 114 1.8e-48 Hsp70 protein
MreB_Mbl PF06723 22 - 99 3.4e-06 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0034289)

Species Orthologous Gene IDs
rosa_samantha Rh1CG274500 Rh1CG316100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 19, 72
AfaI GTAC 1 cut(s) 253
AgsI TTSAA 2 cut(s) 88, 296
Alw26I GTCTC 2 cut(s) 268, 309
AoxI GGCC 1 cut(s) 133
ApeKI GCWGC 2 cut(s) 119, 170
AsuHPI GGTGA 2 cut(s) 61, 154
AsuNHI GCTAGC 1 cut(s) 271
BbvCI CCTCAGC 1 cut(s) 30
BbvI GCAGC 2 cut(s) 106, 157
BccI CCATC 1 cut(s) 330
BceAI ACGGC 1 cut(s) 324
BcgI CGANNNNNNTGC 2 cut(s) 149, 183
BcoDI GTCTC 2 cut(s) 268, 309
BfaI CTAG 2 cut(s) 272, 326
BfmI CTRYAG 1 cut(s) 255
BisI GCNGC 2 cut(s) 120, 171
BlsI GCNGC 2 cut(s) 121, 172
BmsI GCATC 1 cut(s) 6
BmtI GCTAGC 1 cut(s) 275
BpmI CTGGAG 1 cut(s) 333
Bpu10I CCTNAGC 1 cut(s) 30
Bse3DI GCAATG 1 cut(s) 177
BseMI GCAATG 1 cut(s) 177
BseMII CTCAG 1 cut(s) 21
BseXI GCAGC 2 cut(s) 106, 157
BshFI GGCC 1 cut(s) 135
BsmAI GTCTC 2 cut(s) 268, 309
BsmI GAATGC 1 cut(s) 64
BsnI GGCC 1 cut(s) 135
BspACI CCGC 2 cut(s) 19, 72
BspANI GGCC 1 cut(s) 135
BspCNI CTCAG 1 cut(s) 22
BspOI GCTAGC 1 cut(s) 275
BsrDI GCAATG 1 cut(s) 177
Bst4CI ACNGT 1 cut(s) 52
BstAPI GCANNNNNTGC 1 cut(s) 179
BstC8I GCNNGC 2 cut(s) 133, 273
BstDEI CTNAG 1 cut(s) 30
BstMAI GTCTC 2 cut(s) 268, 309
BstMWI GCNNNNNNNGC 2 cut(s) 128, 179
BstSFI CTRYAG 1 cut(s) 255
BstV1I GCAGC 2 cut(s) 106, 157
BsuRI GGCC 1 cut(s) 135
BtsI GCAGTG 2 cut(s) 126, 266
BtsIMutI CAGTG 2 cut(s) 126, 266
Cac8I GCNNGC 2 cut(s) 133, 273
CseI GACGC 1 cut(s) 89
Csp6I GTAC 1 cut(s) 252
CviJI RGCY 6 cut(s) 35, 45, 107, 135, 305, 311
CviKI_1 RGCY 6 cut(s) 35, 45, 107, 135, 305, 311
CviQI GTAC 1 cut(s) 252
DdeI CTNAG 1 cut(s) 30
FaiI YATR 3 cut(s) 186, 213, 257
FauI CCCGC 1 cut(s) 12
Fnu4HI GCNGC 2 cut(s) 120, 171
Fsp4HI GCNGC 2 cut(s) 120, 171
FspBI CTAG 2 cut(s) 272, 326
GluI GCNGC 2 cut(s) 120, 171
GsuI CTGGAG 1 cut(s) 333
HaeIII GGCC 1 cut(s) 135
HgaI GACGC 1 cut(s) 89
HinfI GANTC 1 cut(s) 92
HphI GGTGA 2 cut(s) 61, 154
HpyCH4III ACNGT 1 cut(s) 52
HpyCH4V TGCA 3 cut(s) 62, 150, 173
HpyF10VI GCNNNNNNNGC 2 cut(s) 128, 179
HpyF3I CTNAG 1 cut(s) 30
LpnPI CCDG 4 cut(s) 89, 117, 270, 297
Lsp1109I GCAGC 2 cut(s) 106, 157
LweI GCATC 1 cut(s) 6
MaeI CTAG 2 cut(s) 272, 326
MaeIII GTNAC 1 cut(s) 124
MboII GAAGA 1 cut(s) 348
MlyI GAGTC 1 cut(s) 86
MnlI CCTC 3 cut(s) 25, 48, 323
Mva1269I GAATGC 1 cut(s) 64
MwoI GCNNNNNNNGC 2 cut(s) 128, 179
NheI GCTAGC 1 cut(s) 271
NmuCI GTSAC 1 cut(s) 124
PctI GAATGC 1 cut(s) 64
PkrI GCNGC 2 cut(s) 121, 172
PleI GAGTC 1 cut(s) 86
PpsI GAGTC 1 cut(s) 86
RsaI GTAC 1 cut(s) 253
RsaNI GTAC 1 cut(s) 252
SatI GCNGC 2 cut(s) 120, 171
SchI GAGTC 1 cut(s) 86
SetI ASST 2 cut(s) 144, 247
SfaNI GCATC 1 cut(s) 6
SfcI CTRYAG 1 cut(s) 255
SsiI CCGC 2 cut(s) 19, 72
SspMI CTAG 2 cut(s) 272, 326
TaaI ACNGT 1 cut(s) 52
TscAI CASTG 2 cut(s) 133, 273
TseFI GTSAC 1 cut(s) 124
TseI GCWGC 2 cut(s) 119, 170
Tsp45I GTSAC 1 cut(s) 124
TspRI CASTG 2 cut(s) 133, 273
XspI CTAG 2 cut(s) 272, 326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.