Rh2BG351200
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
47858639 .. 47859350
712 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG351200.1

Sequence Viewer

Length: 420 bp
ATGGAAGCAGAGGATGAGTACAGAAGGAAGGCCCGCGTGGCATTGGTGGTCATTGTGGTCCTCGCTTCCCTCGCCGTCGCTTCATTACTCGTCGCCTTTAGCTACTACTGCTACATCCGCAACAAGGTAGCCAAGCACCTCAACAACAACAAGAGCAACAACAACAACGGGGCTGACTTGGAGGGCAAAGGTGGTTTTCCAAATCCGAAAACAGCTGCGACTGACGGAGTTCAGGTCTTCACGTTTAAGCAACTACATTCGGCGACTGGGGGTTTCAGCAAATCGAATGTGGTTGGGAAAGGCGGATTCGGGTTGGTGTACCGTGGGGTGCTGCATAATGGGAGGAAAGTTGCAATTAAGTTTATGGACCAAGCAGGAAAGCAGGGAGAAGAAGAGTTTGAAATGGAGGTTTGCTCTTAG

Protein Analysis

139

Amino Acids

15.09

Weight (kDa)

9.27

Isoelectric Point (pI)

19.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0033055)

Species Orthologous Gene IDs
rosa_samantha Rh2AG343100 Rh2BG351200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 36
AciI CCGC 3 cut(s) 34, 118, 303
AfaI GTAC 2 cut(s) 20, 320
AfiI CCNNNNNNNGG 1 cut(s) 124
AgsI TTSAA 1 cut(s) 401
AluBI AGCT 2 cut(s) 102, 215
AluI AGCT 2 cut(s) 102, 215
AoxI GGCC 1 cut(s) 30
ApeKI GCWGC 2 cut(s) 215, 331
AspS9I GGNCC 3 cut(s) 31, 58, 367
AvaII GGWCC 2 cut(s) 58, 367
BbsI GAAGAC 1 cut(s) 229
BbvI GCAGC 2 cut(s) 202, 318
BceAI ACGGC 1 cut(s) 59
BglI GCCNNNNNGGC 1 cut(s) 38
BisI GCNGC 2 cut(s) 216, 332
BlsI GCNGC 2 cut(s) 217, 333
Bme18I GGWCC 2 cut(s) 58, 367
BmgT120I GGNCC 3 cut(s) 31, 58, 367
BmrI ACTGGG 1 cut(s) 276
BmuI ACTGGG 1 cut(s) 276
BpiI GAAGAC 1 cut(s) 229
BplI GAGNNNNNCTC 1 cut(s) 398
BsaJI CCNNGG 1 cut(s) 322
BsaXI ACNNNNNCTCC 2 cut(s) 219, 249
Bsc4I CCNNNNNNNGG 1 cut(s) 124
Bse1I ACTGG 1 cut(s) 271
BseDI CCNNGG 1 cut(s) 322
BseGI GGATG 2 cut(s) 19, 114
BseLI CCNNNNNNNGG 1 cut(s) 124
BseNI ACTGG 1 cut(s) 271
BseXI GCAGC 2 cut(s) 202, 318
Bsh1236I CGCG 1 cut(s) 36
BshFI GGCC 1 cut(s) 32
BslI CCNNNNNNNGG 1 cut(s) 124
BsnI GGCC 1 cut(s) 32
BspACI CCGC 3 cut(s) 34, 118, 303
BspANI GGCC 1 cut(s) 32
BspFNI CGCG 1 cut(s) 36
BsrI ACTGG 1 cut(s) 271
BssECI CCNNGG 1 cut(s) 322
Bst4CI ACNGT 1 cut(s) 323
Bst6I CTCTTC 1 cut(s) 387
BstC8I GCNNGC 1 cut(s) 34
BstDEI CTNAG 1 cut(s) 417
BstDSI CCRYGG 1 cut(s) 322
BstF5I GGATG 2 cut(s) 19, 114
BstFNI CGCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 4 cut(s) 38, 71, 108, 117
BstUI CGCG 1 cut(s) 36
BstV1I GCAGC 2 cut(s) 202, 318
BstV2I GAAGAC 1 cut(s) 229
BsuRI GGCC 1 cut(s) 32
BtgI CCRYGG 1 cut(s) 322
BtsCI GGATG 2 cut(s) 19, 114
Cac8I GCNNGC 1 cut(s) 34
Cfr13I GGNCC 3 cut(s) 31, 58, 367
Csp6I GTAC 2 cut(s) 19, 319
CviJI RGCY 5 cut(s) 32, 102, 131, 173, 215
CviKI_1 RGCY 5 cut(s) 32, 102, 131, 173, 215
CviQI GTAC 2 cut(s) 19, 319
DdeI CTNAG 1 cut(s) 417
Eam1104I CTCTTC 1 cut(s) 387
EarI CTCTTC 1 cut(s) 387
EciI GGCGGA 1 cut(s) 318
Eco47I GGWCC 2 cut(s) 58, 367
FaiI YATR 2 cut(s) 336, 365
FauI CCCGC 1 cut(s) 41
Fnu4HI GCNGC 2 cut(s) 216, 332
FokI GGATG 2 cut(s) 26, 101
Fsp4HI GCNGC 2 cut(s) 216, 332
GluI GCNGC 2 cut(s) 216, 332
HaeIII GGCC 1 cut(s) 32
HinfI GANTC 1 cut(s) 306
Hpy166II GTNNAC 1 cut(s) 319
Hpy188I TCNGA 1 cut(s) 207
Hpy8I GTNNAC 1 cut(s) 319
Hpy99I CGWCG 2 cut(s) 80, 95
HpyAV CCTTC 2 cut(s) 18, 22
HpyCH4III ACNGT 1 cut(s) 323
HpyCH4IV ACGT 1 cut(s) 242
HpyCH4V TGCA 2 cut(s) 334, 353
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 71, 108, 117
HpyF3I CTNAG 1 cut(s) 417
HpySE526I ACGT 1 cut(s) 242
LpnPI CCDG 4 cut(s) 218, 252, 360, 368
Lsp1109I GCAGC 2 cut(s) 202, 318
MaeII ACGT 1 cut(s) 242
MboII GAAGA 3 cut(s) 229, 401, 404
MluCI AATT 1 cut(s) 354
MnlI CCTC 7 cut(s) 4, 71, 80, 149, 175, 336, 400
MseI TTAA 2 cut(s) 246, 357
MspA1I CMGCKG 1 cut(s) 215
MvnI CGCG 1 cut(s) 36
MwoI GCNNNNNNNGC 4 cut(s) 38, 71, 108, 117
PfeI GAWTC 1 cut(s) 306
PkrI GCNGC 2 cut(s) 217, 333
PspPI GGNCC 3 cut(s) 31, 58, 367
PvuII CAGCTG 1 cut(s) 215
RsaI GTAC 2 cut(s) 20, 320
RsaNI GTAC 2 cut(s) 19, 319
SaqAI TTAA 2 cut(s) 246, 357
SatI GCNGC 2 cut(s) 216, 332
Sau96I GGNCC 3 cut(s) 31, 58, 367
SetI ASST 8 cut(s) 104, 129, 141, 193, 217, 237, 245, 411
SinI GGWCC 2 cut(s) 58, 367
Sse9I AATT 1 cut(s) 354
SsiI CCGC 3 cut(s) 34, 118, 303
TaaI ACNGT 1 cut(s) 323
TaiI ACGT 1 cut(s) 245
TaqI TCGA 1 cut(s) 284
TasI AATT 1 cut(s) 354
TatI WGTACW 1 cut(s) 18
TfiI GAWTC 1 cut(s) 306
Tru1I TTAA 2 cut(s) 246, 357
Tru9I TTAA 2 cut(s) 246, 357
TseI GCWGC 2 cut(s) 215, 331
TspDTI ATGAA 1 cut(s) 72
TspGWI ACGGA 1 cut(s) 240
VpaK11BI GGWCC 2 cut(s) 58, 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.