Belongs to the class-I aminoacyl-tRNA synthetase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0157351 RchiOBHm_Chr2g0162141 RchiOBHm_Chr5g0058951 |
| rosa_samantha | Rh2BG538900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 66, 179 |
| AcsI | RAATTY | 1 cut(s) | 241 |
| AdeI | CACNNNGTG | 1 cut(s) | 270 |
| AgeI | ACCGGT | 1 cut(s) | 22 |
| AluBI | AGCT | 3 cut(s) | 47, 92, 200 |
| AluI | AGCT | 3 cut(s) | 47, 92, 200 |
| AlwI | GGATC | 2 cut(s) | 66, 179 |
| ApeKI | GCWGC | 2 cut(s) | 47, 89 |
| ApoI | RAATTY | 1 cut(s) | 241 |
| AsiGI | ACCGGT | 1 cut(s) | 22 |
| AspS9I | GGNCC | 1 cut(s) | 230 |
| AvaII | GGWCC | 1 cut(s) | 230 |
| BbvI | GCAGC | 2 cut(s) | 34, 101 |
| BccI | CCATC | 1 cut(s) | 241 |
| BglII | AGATCT | 1 cut(s) | 220 |
| BisI | GCNGC | 2 cut(s) | 48, 90 |
| BlsI | GCNGC | 2 cut(s) | 49, 91 |
| Bme18I | GGWCC | 1 cut(s) | 230 |
| BmgT120I | GGNCC | 1 cut(s) | 230 |
| BoxI | GACNNNNGTC | 1 cut(s) | 253 |
| BsaWI | WCCGGW | 1 cut(s) | 22 |
| Bse118I | RCCGGY | 1 cut(s) | 22 |
| BseMII | CTCAG | 2 cut(s) | 134, 201 |
| BseXI | GCAGC | 2 cut(s) | 34, 101 |
| BshTI | ACCGGT | 1 cut(s) | 22 |
| BsiSI | CCGG | 1 cut(s) | 23 |
| Bsp143I | GATC | 3 cut(s) | 58, 184, 220 |
| BspCNI | CTCAG | 2 cut(s) | 133, 202 |
| BspPI | GGATC | 2 cut(s) | 66, 179 |
| BsrFI | RCCGGY | 1 cut(s) | 22 |
| BssAI | RCCGGY | 1 cut(s) | 22 |
| BssMI | GATC | 3 cut(s) | 58, 184, 220 |
| Bst4CI | ACNGT | 1 cut(s) | 112 |
| BstDEI | CTNAG | 3 cut(s) | 93, 120, 210 |
| BstKTI | GATC | 3 cut(s) | 61, 187, 223 |
| BstMBI | GATC | 3 cut(s) | 58, 184, 220 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 98 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 253 |
| BstV1I | GCAGC | 2 cut(s) | 34, 101 |
| BstX2I | RGATCY | 2 cut(s) | 58, 220 |
| BstYI | RGATCY | 2 cut(s) | 58, 220 |
| Cfr10I | RCCGGY | 1 cut(s) | 22 |
| Cfr13I | GGNCC | 1 cut(s) | 230 |
| CspAI | ACCGGT | 1 cut(s) | 22 |
| CviAII | CATG | 2 cut(s) | 237, 251 |
| CviJI | RGCY | 3 cut(s) | 47, 92, 200 |
| CviKI_1 | RGCY | 3 cut(s) | 47, 92, 200 |
| DdeI | CTNAG | 3 cut(s) | 93, 120, 210 |
| DpnI | GATC | 3 cut(s) | 60, 186, 222 |
| DpnII | GATC | 3 cut(s) | 58, 184, 220 |
| DraIII | CACNNNGTG | 1 cut(s) | 270 |
| Eco47I | GGWCC | 1 cut(s) | 230 |
| FaeI | CATG | 2 cut(s) | 240, 254 |
| FaiI | YATR | 6 cut(s) | 144, 157, 195, 238, 252, 260 |
| FatI | CATG | 2 cut(s) | 236, 250 |
| Fnu4HI | GCNGC | 2 cut(s) | 48, 90 |
| Fsp4HI | GCNGC | 2 cut(s) | 48, 90 |
| GluI | GCNGC | 2 cut(s) | 48, 90 |
| HapII | CCGG | 1 cut(s) | 23 |
| Hin1II | CATG | 2 cut(s) | 240, 254 |
| HincII | GTYRAC | 1 cut(s) | 115 |
| HindII | GTYRAC | 1 cut(s) | 115 |
| HindIII | AAGCTT | 1 cut(s) | 198 |
| HinfI | GANTC | 2 cut(s) | 178, 254 |
| HpaI | GTTAAC | 1 cut(s) | 115 |
| HpaII | CCGG | 1 cut(s) | 23 |
| Hpy166II | GTNNAC | 1 cut(s) | 115 |
| Hpy188I | TCNGA | 3 cut(s) | 123, 211, 248 |
| Hpy188III | TCNNGA | 1 cut(s) | 182 |
| Hpy8I | GTNNAC | 1 cut(s) | 115 |
| HpyAV | CCTTC | 1 cut(s) | 79 |
| HpyCH4III | ACNGT | 1 cut(s) | 112 |
| HpyCH4V | TGCA | 2 cut(s) | 31, 155 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 98 |
| HpyF3I | CTNAG | 3 cut(s) | 93, 120, 210 |
| Hsp92II | CATG | 2 cut(s) | 240, 254 |
| KspAI | GTTAAC | 1 cut(s) | 115 |
| Kzo9I | GATC | 3 cut(s) | 58, 184, 220 |
| LpnPI | CCDG | 1 cut(s) | 36 |
| Lsp1109I | GCAGC | 2 cut(s) | 34, 101 |
| MalI | GATC | 3 cut(s) | 60, 186, 222 |
| MboI | GATC | 3 cut(s) | 58, 184, 220 |
| MflI | RGATCY | 2 cut(s) | 58, 220 |
| MluCI | AATT | 1 cut(s) | 241 |
| MlyI | GAGTC | 2 cut(s) | 172, 263 |
| MseI | TTAA | 2 cut(s) | 114, 135 |
| MslI | CAYNNNNRTG | 1 cut(s) | 122 |
| MspI | CCGG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 98 |
| NdeII | GATC | 3 cut(s) | 58, 184, 220 |
| NlaIII | CATG | 2 cut(s) | 240, 254 |
| PinAI | ACCGGT | 1 cut(s) | 22 |
| PkrI | GCNGC | 2 cut(s) | 49, 91 |
| PleI | GAGTC | 2 cut(s) | 172, 262 |
| PpsI | GAGTC | 2 cut(s) | 172, 262 |
| PshAI | GACNNNNGTC | 1 cut(s) | 253 |
| PspPI | GGNCC | 1 cut(s) | 230 |
| PsuI | RGATCY | 2 cut(s) | 58, 220 |
| RseI | CAYNNNNRTG | 1 cut(s) | 122 |
| SaqAI | TTAA | 2 cut(s) | 114, 135 |
| SatI | GCNGC | 2 cut(s) | 48, 90 |
| Sau3AI | GATC | 3 cut(s) | 58, 184, 220 |
| Sau96I | GGNCC | 1 cut(s) | 230 |
| SchI | GAGTC | 2 cut(s) | 172, 263 |
| SetI | ASST | 5 cut(s) | 49, 94, 202, 232, 272 |
| SinI | GGWCC | 1 cut(s) | 230 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 122 |
| Sse9I | AATT | 1 cut(s) | 241 |
| SspI | AATATT | 1 cut(s) | 150 |
| TaaI | ACNGT | 1 cut(s) | 112 |
| TaqI | TCGA | 2 cut(s) | 17, 52 |
| TasI | AATT | 1 cut(s) | 241 |
| Tru1I | TTAA | 2 cut(s) | 114, 135 |
| Tru9I | TTAA | 2 cut(s) | 114, 135 |
| TseI | GCWGC | 2 cut(s) | 47, 89 |
| TspDTI | ATGAA | 1 cut(s) | 140 |
| VpaK11BI | GGWCC | 1 cut(s) | 230 |
| XapI | RAATTY | 1 cut(s) | 241 |